FFCP PHASE1:Mm9::chr9:44788473..44788520,-: Difference between revisions
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{{FFCP|EntrezGene=12502|HGNC=|MCL_coexpression_id=33|UniProt=P11942,E0CXP3,Q3U4Y3|association_with_transcript=0bp_to_ENSMUST00000002101,ENSMUST00000160886,NM_009850,uc009pex.2_5end|description=CAGE_peak_1_at_Cd3g_5end|id=chr9:44788473..44788520,-|ontology_enrichment_celltype=CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000838!1.89e-07!12;CL:0000791!2.18e-07!9;CL:0000789!2.18e-07!9;CL:0002420!2.18e-07!9;CL:0002419!2.18e-07!9;CL:0000790!2.18e-07!9;CL:0000624!9.81e-07!8|ontology_enrichment_celltype_v019_2=CL:0000084,7.80e-09,11;CL:0000827,7.80e-09,11;CL:0000838,1.48e-08,12;CL:0000791,1.75e-08,9;CL:0000789,1.75e-08,9;CL:0002420,1.75e-08,9;CL:0002419,1.75e-08,9;CL:0000790,1.75e-08,9;CL:0000624,1.04e-07,8;CL:0000542,1.61e-07,13;CL:0000051,1.61e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.14e-13!29;UBERON:0004119!2.44e-12!130;UBERON:0000925!2.44e-12!130;UBERON:0006595!2.44e-12!130;UBERON:0001007!2.70e-12!128;UBERON:0001555!2.70e-12!128;UBERON:0007026!2.70e-12!128;UBERON:0004921!1.49e-11!126;UBERON:0004185!1.49e-11!126;UBERON:0003408!1.88e-11!24;UBERON:0002370!5.01e-11!23;UBERON:0000974!5.01e-11!23;UBERON:0004807!5.01e-11!23;UBERON:0005058!5.01e-11!23;UBERON:0003351!5.01e-11!23;UBERON:0009113!5.01e-11!23;UBERON:0003295!5.01e-11!23;UBERON:0009722!5.01e-11!23;UBERON:0005562!5.01e-11!23;UBERON:0007690!5.01e-11!23;UBERON:0006562!9.10e-11!24;UBERON:0001557!9.10e-11!24;UBERON:0001042!9.10e-11!24;UBERON:0008814!9.10e-11!24;UBERON:0009145!9.10e-11!24;UBERON:0002193!1.20e-10!48;UBERON:0005057!3.39e-10!51;UBERON:0001004!8.24e-10!42;UBERON:0000065!2.07e-09!41;UBERON:0000077!2.13e-09!97;UBERON:0002390!2.32e-09!45;UBERON:0003061!2.32e-09!45;UBERON:0002405!2.75e-09!70;UBERON:0001041!8.08e-09!92;UBERON:0000072!3.80e-08!27;UBERON:0005911!3.47e-07!69|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.75e-17,29;UBERON:0005057,8.75e-17,29;UBERON:0000077,2.02e-15,35;UBERON:0001007,3.06e-14,116;UBERON:0001555,3.06e-14,116;UBERON:0007026,3.06e-14,116;UBERON:0003408,3.82e-14,24;UBERON:0004119,4.67e-14,118;UBERON:0000925,4.67e-14,118;UBERON:0006595,4.67e-14,118;UBERON:0002193,6.98e-14,48;UBERON:0002405,6.98e-14,48;UBERON:0002370,1.22e-13,23;UBERON:0000974,1.22e-13,23;UBERON:0004807,1.22e-13,23;UBERON:0005058,1.22e-13,23;UBERON:0003351,1.22e-13,23;UBERON:0009113,1.22e-13,23;UBERON:0003295,1.22e-13,23;UBERON:0009722,1.22e-13,23;UBERON:0005562,1.22e-13,23;UBERON:0007690,1.22e-13,23;UBERON:0004921,2.32e-13,114;UBERON:0006562,1.19e-12,24;UBERON:0001557,1.19e-12,24;UBERON:0001042,1.19e-12,24;UBERON:0008814,1.19e-12,24;UBERON:0009145,1.19e-12,24;UBERON:0002390,2.72e-12,45;UBERON:0003061,2.72e-12,45;UBERON:0001004,1.65e-11,42;UBERON:0000065,4.94e-11,41;UBERON:0001041,2.82e-10,80;UBERON:0000072,3.60e-10,27;UBERON:0005911,4.71e-09,69;UBERON:0003929,1.82e-07,55;UBERON:0002530,2.36e-07,65|phase1_expression=0.160148847104794,1.74487703819681,0,0,0,0,0,563.235936852156,145.153172538368,202.933944321168,201.694766569645,149.33348163927,606.735386876193,654.86623452071,10.6595123781012,13.5658429151183,2.09868563438444,51.4203329533927,53.8859724070553,18.6731446791133,14.2022294552287,9.53193131528499,1.82839852397255,7.99962113967033,8.02932483735095,0,0.86152399231815,0.430942465371778,25.6531616266105,43.8532425782279,26.8293917892919,0,0,0,0,1.32987716286794,1.22501613757421,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,1.17447824240415,427.238301644682,406.001309364096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,1.8931548333296,0,0,3.44169550792555,0,0.539703191637817,0,0,16.1511083151515,0,0,0,0,0,0,0,0,0,0,19.9821789508355,187.988903527847,7.12522267511159,5.20455980298408,0.304465478312141,0,0.150722640552623,0.23517741427141,0.628332956648377,0,2.89198713839823,8.84610551949874,0.323533699894818,0.662524555381181,0.969750506270444,5.59175283654366,0,0,28.8666472385708,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,2.98576729464223,2.27450482590307,0.841767423545896,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.703804496655795,0.43839146485515,0.834141747676794,0,0.411564272815887,0.995171334092466,0,0.257347907114715,0.284163499395593,0,0,0,1.18372367792605,2.36117078096885,0,0,0,5.60473643362414,0,3.61168420974009,1.37816976227955,4.38599962275997,1.3173006917463,1.20785776884335,0.210289948564127,0,82.9351145289333,7.40461586657924,0,0.464473343720877,1.41754207454303,0.201683524623343,0.22237804384487,0.760902504450237,6.64340686162316,0,3.01602250560323,3.78017296878187,2.53453313254856,4.49409704327111,7.99710784536369,10.3553462092271,0,0,0,0,0.193952487167626,0,0.316182685621286,0.590440591918409,0.470996183524124,0.493588655687202,2.96452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,1.01850340712568,1.43848068725405,1.94562272130042,5.2166668505735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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12502 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P11942,uniprot:E0CXP3,uniprot:Q3U4Y3 | |||
|association_with_transcript=0bp_to_ENSMUST00000002101,ENSMUST00000160886,NM_009850,uc009pex.2_5end | |||
|cluster_id=chr9:44788473..44788520,- | |||
|description=CAGE_peak_1_at_Cd3g_5end | |||
|id=chr9:44788473..44788520,- | |||
|ontology_enrichment_celltype=CL:0000084!1.10e-07!11;CL:0000827!1.10e-07!11;CL:0000838!1.89e-07!12;CL:0000791!2.18e-07!9;CL:0000789!2.18e-07!9;CL:0002420!2.18e-07!9;CL:0002419!2.18e-07!9;CL:0000790!2.18e-07!9;CL:0000624!9.81e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.80e-09,11;CL:0000827,7.80e-09,11;CL:0000838,1.48e-08,12;CL:0000791,1.75e-08,9;CL:0000789,1.75e-08,9;CL:0002420,1.75e-08,9;CL:0002419,1.75e-08,9;CL:0000790,1.75e-08,9;CL:0000624,1.04e-07,8;CL:0000542,1.61e-07,13;CL:0000051,1.61e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.14e-13!29;UBERON:0004119!2.44e-12!130;UBERON:0000925!2.44e-12!130;UBERON:0006595!2.44e-12!130;UBERON:0001007!2.70e-12!128;UBERON:0001555!2.70e-12!128;UBERON:0007026!2.70e-12!128;UBERON:0004921!1.49e-11!126;UBERON:0004185!1.49e-11!126;UBERON:0003408!1.88e-11!24;UBERON:0002370!5.01e-11!23;UBERON:0000974!5.01e-11!23;UBERON:0004807!5.01e-11!23;UBERON:0005058!5.01e-11!23;UBERON:0003351!5.01e-11!23;UBERON:0009113!5.01e-11!23;UBERON:0003295!5.01e-11!23;UBERON:0009722!5.01e-11!23;UBERON:0005562!5.01e-11!23;UBERON:0007690!5.01e-11!23;UBERON:0006562!9.10e-11!24;UBERON:0001557!9.10e-11!24;UBERON:0001042!9.10e-11!24;UBERON:0008814!9.10e-11!24;UBERON:0009145!9.10e-11!24;UBERON:0002193!1.20e-10!48;UBERON:0005057!3.39e-10!51;UBERON:0001004!8.24e-10!42;UBERON:0000065!2.07e-09!41;UBERON:0000077!2.13e-09!97;UBERON:0002390!2.32e-09!45;UBERON:0003061!2.32e-09!45;UBERON:0002405!2.75e-09!70;UBERON:0001041!8.08e-09!92;UBERON:0000072!3.80e-08!27;UBERON:0005911!3.47e-07!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.75e-17,29;UBERON:0005057,8.75e-17,29;UBERON:0000077,2.02e-15,35;UBERON:0001007,3.06e-14,116;UBERON:0001555,3.06e-14,116;UBERON:0007026,3.06e-14,116;UBERON:0003408,3.82e-14,24;UBERON:0004119,4.67e-14,118;UBERON:0000925,4.67e-14,118;UBERON:0006595,4.67e-14,118;UBERON:0002193,6.98e-14,48;UBERON:0002405,6.98e-14,48;UBERON:0002370,1.22e-13,23;UBERON:0000974,1.22e-13,23;UBERON:0004807,1.22e-13,23;UBERON:0005058,1.22e-13,23;UBERON:0003351,1.22e-13,23;UBERON:0009113,1.22e-13,23;UBERON:0003295,1.22e-13,23;UBERON:0009722,1.22e-13,23;UBERON:0005562,1.22e-13,23;UBERON:0007690,1.22e-13,23;UBERON:0004921,2.32e-13,114;UBERON:0006562,1.19e-12,24;UBERON:0001557,1.19e-12,24;UBERON:0001042,1.19e-12,24;UBERON:0008814,1.19e-12,24;UBERON:0009145,1.19e-12,24;UBERON:0002390,2.72e-12,45;UBERON:0003061,2.72e-12,45;UBERON:0001004,1.65e-11,42;UBERON:0000065,4.94e-11,41;UBERON:0001041,2.82e-10,80;UBERON:0000072,3.60e-10,27;UBERON:0005911,4.71e-09,69;UBERON:0003929,1.82e-07,55;UBERON:0002530,2.36e-07,65 | |||
|phase1_expression=0.160148847104794,1.74487703819681,0,0,0,0,0,563.235936852156,145.153172538368,202.933944321168,201.694766569645,149.33348163927,606.735386876193,654.86623452071,10.6595123781012,13.5658429151183,2.09868563438444,51.4203329533927,53.8859724070553,18.6731446791133,14.2022294552287,9.53193131528499,1.82839852397255,7.99962113967033,8.02932483735095,0,0.86152399231815,0.430942465371778,25.6531616266105,43.8532425782279,26.8293917892919,0,0,0,0,1.32987716286794,1.22501613757421,0.418531630736908,0.7813353445238,0,0,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,1.17447824240415,427.238301644682,406.001309364096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,1.8931548333296,0,0,3.44169550792555,0,0.539703191637817,0,0,16.1511083151515,0,0,0,0,0,0,0,0,0,0,19.9821789508355,187.988903527847,7.12522267511159,5.20455980298408,0.304465478312141,0,0.150722640552623,0.23517741427141,0.628332956648377,0,2.89198713839823,8.84610551949874,0.323533699894818,0.662524555381181,0.969750506270444,5.59175283654366,0,0,28.8666472385708,0,0,0,0.299581278809645,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,2.98576729464223,2.27450482590307,0.841767423545896,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0.703804496655795,0.43839146485515,0.834141747676794,0,0.411564272815887,0.995171334092466,0,0.257347907114715,0.284163499395593,0,0,0,1.18372367792605,2.36117078096885,0,0,0,5.60473643362414,0,3.61168420974009,1.37816976227955,4.38599962275997,1.3173006917463,1.20785776884335,0.210289948564127,0,82.9351145289333,7.40461586657924,0,0.464473343720877,1.41754207454303,0.201683524623343,0.22237804384487,0.760902504450237,6.64340686162316,0,3.01602250560323,3.78017296878187,2.53453313254856,4.49409704327111,7.99710784536369,10.3553462092271,0,0,0,0,0.193952487167626,0,0.316182685621286,0.590440591918409,0.470996183524124,0.493588655687202,2.96452627087149,0.166845105716094,0,0.224862112384854,0.202860121388503,0,1.01850340712568,1.43848068725405,1.94562272130042,5.21666685057355,10.0637744569148,9.30352369171258,6.55279113540577,2.77836765741823,1.25578189465339,1.4473305640901,26.4197061938245,0.189491411770485,0,0.339490171550376,0,9.71536293162531,0.238043640886014,1.56106918286239,9.93101407869003,4.4292937929755,7.33491935824441,17.0417847304368,16.4050732772601,12.150520920847,0,0,9.34352118736169,7.45029215022778,0.321101179975584,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0.292255857911312,0,0,2.12910127812403,0.534196811001766,0,2.63952196756057,6.63725691699814,0.242780636154981,0,0.188605079755898,0.590603785761546,0.307435147943927,1.29214146584111,1.81766864738753,2.85197902707777,6.63677191665214,0,1.03135543248187,1.02131881726136,0,0,0,0.177340233642274,0.356737635204141,0,0,1.64270195644597,0.21183207086382,1.98475558249466,12.036696464728,2.74489525383039,2.77439454669517,5.252383136138,6.56563598980245,2.62332752966866,0.18542530201051,31.7819838284006,2.47664241555867,5.74103034846106,15.6345819313894,18.8638034255015,30.4274970364675,0,0.139951452323658,0,0,0.158167996790568,0,0.324016022465404,0,0,0.134864346384821,1.90102948168273,1.57053565190418,3.6292192521702,9.32008969630389,0,0.299033092087958,0,0,0.129159823477731,1.01373675294467,0.704143431874524,0.781226309063701,0.943734099831398,0.241584120826006,0.288030006257865,485.70909240551,189.548076296304,390.198926269179,392.490806215919,355.009937508616,434.714804261408,377.173320593662,454.292985588999,448.089104869879,404.124695691464,437.182338753341,432.420616842282,462.105475398502,474.052715248444,0.680191150845634,0,0,0,3.28422309854724,2.25218970541418,1.83151624267265,1.92931541171159,7.52358156053045,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.45864030240976,0.628839487883947,0.919217542250071,4.00044110042907,1.44224540067226,1.28367683836726,1.76888048234658,1.01391719956096,2.26351609663291,2.62196220915671,2.11283002936069,2.41228969613576,0.952587382566147,1.0429589335037,1.73618298417335,3.29668720642645,2.35518272215036,1.71434626192708,1.59728225543404,0.953744759789284,2.0348498328526,1.50575008664529,2.19997980518359,2.74391959309159,2.10455769150274,1.7654534799962,2.80571135828869,1.54225523561426,1.77308068276014,2.04615521584845,1.85924209423159,2.50778594275484,0,2.33931608445408,3.86767897286937,0.765153328275374,2.20591419119516,3.01428186306548 | |||
|short_description=p1@Cd3g | |||
}} |
Revision as of 04:28, 5 August 2015
Short description: | p1@Cd3g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cd3g_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000002101, ENSMUST00000160886, NM_009850, uc009pex.2_5end |
EntrezGene: | 12502 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.80e-09 | 11 |
pro-T cell | 7.80e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.48e-08 | 12 |
mature alpha-beta T cell | 1.75e-08 | 9 |
alpha-beta T cell | 1.75e-08 | 9 |
immature T cell | 1.75e-08 | 9 |
mature T cell | 1.75e-08 | 9 |
immature alpha-beta T cell | 1.75e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.04e-07 | 8 |
lymphocyte | 1.61e-07 | 13 |
common lymphoid progenitor | 1.61e-07 | 13 |