FFCP PHASE1:Mm9::chr1:165992201..165992229,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20343|HGNC=|MCL_coexpression_id=36|UniProt=P18337,Q3TCF3,E9Q5W7,Q3UV83|association_with_transcript=0bp_to_ENSMUST00000027871,ENSMUST00000097491,ENSMUST00000167117,NM_001164059,NM_011346,uc007dhy.2,uc011wuv.1_5end|description=CAGE_peak_1_at_Sell_5end|id=chr1:165992201..165992229,+|ontology_enrichment_celltype=CL:0000988!2.80e-07!32;CL:0002032!2.80e-07!32;CL:0000037!2.80e-07!32;CL:0000566!2.80e-07!32;CL:0000837!2.80e-07!32|ontology_enrichment_celltype_v019_2=CL:0000988,1.18e-08,32;CL:0002032,1.18e-08,32;CL:0000037,1.18e-08,32;CL:0000837,1.18e-08,32;CL:0000791,3.84e-07,9;CL:0000789,3.84e-07,9;CL:0002420,3.84e-07,9;CL:0002419,3.84e-07,9;CL:0000790,3.84e-07,9;CL:0000838,8.38e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!6.90e-14!70;UBERON:0005057!4.46e-12!51;UBERON:0002193!8.05e-12!48;UBERON:0000077!3.24e-11!97;UBERON:0001041!8.01e-11!92;UBERON:0004177!8.66e-11!29;UBERON:0002390!9.78e-11!45;UBERON:0003061!9.78e-11!45;UBERON:0003104!7.96e-10!131;UBERON:0009142!7.96e-10!131;UBERON:0004119!2.77e-09!130;UBERON:0000925!2.77e-09!130;UBERON:0006595!2.77e-09!130;UBERON:0001007!3.65e-09!128;UBERON:0001555!3.65e-09!128;UBERON:0007026!3.65e-09!128;UBERON:0000926!3.82e-09!193;UBERON:0004120!3.82e-09!193;UBERON:0006603!3.82e-09!193;UBERON:0004921!1.01e-08!126;UBERON:0004185!1.01e-08!126;UBERON:0003408!2.15e-08!24;UBERON:0002370!5.11e-08!23;UBERON:0000974!5.11e-08!23;UBERON:0004807!5.11e-08!23;UBERON:0005058!5.11e-08!23;UBERON:0003351!5.11e-08!23;UBERON:0009113!5.11e-08!23;UBERON:0003295!5.11e-08!23;UBERON:0009722!5.11e-08!23;UBERON:0005562!5.11e-08!23;UBERON:0007690!5.11e-08!23;UBERON:0006562!1.29e-07!24;UBERON:0001557!1.29e-07!24;UBERON:0001042!1.29e-07!24;UBERON:0008814!1.29e-07!24;UBERON:0009145!1.29e-07!24;UBERON:0002530!4.85e-07!65;UBERON:0001004!5.95e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.35e-15,48;UBERON:0002405,9.35e-15,48;UBERON:0002390,1.67e-13,45;UBERON:0003061,1.67e-13,45;UBERON:0004177,1.52e-12,29;UBERON:0005057,1.52e-12,29;UBERON:0000077,1.54e-11,35;UBERON:0001041,1.70e-10,80;UBERON:0003408,7.78e-10,24;UBERON:0002370,2.07e-09,23;UBERON:0000974,2.07e-09,23;UBERON:0004807,2.07e-09,23;UBERON:0005058,2.07e-09,23;UBERON:0003351,2.07e-09,23;UBERON:0009113,2.07e-09,23;UBERON:0003295,2.07e-09,23;UBERON:0009722,2.07e-09,23;UBERON:0005562,2.07e-09,23;UBERON:0007690,2.07e-09,23;UBERON:0006562,1.27e-08,24;UBERON:0001557,1.27e-08,24;UBERON:0001042,1.27e-08,24;UBERON:0008814,1.27e-08,24;UBERON:0009145,1.27e-08,24;UBERON:0004119,3.59e-08,118;UBERON:0000925,3.59e-08,118;UBERON:0006595,3.59e-08,118;UBERON:0001004,4.48e-08,42;UBERON:0001007,4.71e-08,116;UBERON:0001555,4.71e-08,116;UBERON:0007026,4.71e-08,116;UBERON:0000065,1.06e-07,41;UBERON:0005911,1.28e-07,69;UBERON:0004921,1.30e-07,114;UBERON:0002530,2.03e-07,65;UBERON:0002368,7.71e-07,60;UBERON:0000949,8.46e-07,72|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,1020.07425518845,99.5376265612284,113.989424318811,38.1816069142876,28.7977493973164,774.340901478844,859.604816986001,95.9356114029109,157.120807494505,37.0767795407918,675.246764949308,740.555055904595,464.282279067045,8.24919914465377,3.27660138962921,0.261199789138935,3.99981056983517,5.50582274561208,0,0,0,0.380046838912748,1.76421090831952,2.88249663851896,0,0,0,0,0,0,605.615269676306,482.865242915709,489.494700615501,1006.46407602107,950.116269577198,580.67038222526,0,0,0,0,0,0,0,0,0,535.562078536295,548.373779360576,896.026068513809,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0.579728977403356,4.30211938490693,0,0,0.649776417447669,0.448026887097336,30.6168835887219,0,0,0,0,0,0,0,0,0,0,24.2069825004407,953.927163356181,2.82040064223167,1.73485326766136,1.21786191324856,1.61430848079241,1.95939432718409,1.52865319276416,1.0053327306374,0.988779870937496,17.3519228303894,205.229648052371,5.50007289821191,33.5679108059798,32.4866419600599,3.72783522436244,1.17112318804619,0,1.53274233125155,416.597187907085,271.755937140014,339.277506285083,0.299581278809645,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,62.7011131874869,0.505445516867349,1.89397670297827,0,0,0,0.90422890701429,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0.43839146485515,0.556094498451196,1.74126083261083,0.823128545631774,0.199034266818493,397.452664019291,205.106281970428,194.367833586585,0,0,0,0.473489471170421,1.57411385397923,0.308534225774757,0.465067889500816,0.804820204198858,0.817357396570186,0.16455984991348,1.97000956894914,1.54030738137126,2.77779976108131,5.04965265169416,3.62357330653004,0.630869845692382,0,1.65209391491899,2.11560453330835,0.213288250535234,0.232236671860439,1.41754207454303,0.605050573870028,0.889512175379481,0.760902504450237,5.21981967698963,0.658795818896044,1.75934646160189,1.59165177632921,3.11942539390592,8.08937467788799,2.37751854862164,1.7922714592893,0,0.228497025219458,0,0.203651327845314,0.775809948670503,0.49095073923223,0.822074982615345,1.91893192373483,1.09899109488962,1.60416313098341,3.26097889795864,3.17005700860579,4.52085688760367,6.2961391467759,11.1573066763677,16.8824011826692,18.0784354764808,19.2756412092043,15.7271169971784,9.60964946158285,7.18841032636773,10.0478055870496,5.30464044294753,2.52578877947112,1.25578189465339,2.41221760681684,113.068952381962,0,0.162964976442026,1.01847051465113,0.469380496577004,1.34005005953453,2.61848004974615,2.14647012643579,13.3989872490262,11.5161638617363,9.8861956567642,44.0792316585335,43.1712454664739,26.3261286618351,0,2.17562273527484,18.1952781017043,20.9711927191597,0.321101179975584,0,0,5.04941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,1.41940085208269,0.890328018336276,0.651547837414304,5.27904393512113,10.619611067197,0,0.302323556964751,0.943025398779491,1.77181135728464,1.53717573971964,1.80899805217755,0,3.92147116223193,14.5376908650475,4.21674434299995,3.09406629744561,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,2.11204537257339,1.27099242518292,1.32317038832977,0.8244312647074,0.322928853391811,0.542816324353403,0.119372344003136,0.164140899745061,8.74442509889552,2.22510362412612,167.1117214203,35.7049281576375,89.0785676648313,47.6572196221868,106.484803394679,114.617864776468,150.090953684574,184.595965614905,133.915774616487,0.954670618015114,0.474503990371703,1.21991680276109,0.648032044930808,0.418176592028937,1.09181281873089,0.674321731924103,1.40510874733071,1.30877970992015,2.85152941241944,33.552322906694,0,0,0,0.777804753376191,0.645799117388655,1.18269287843545,1.17357238645754,0.2604087696879,0,0,0.288030006257865,175.702183069267,83.3200634842575,167.521571135833,140.184567993041,91.840694877418,90.4000164254755,76.4443058947002,89.3521639406192,99.7548525487699,73.0823275821448,83.1816027378934,110.614694639619,108.623169211932,107.877380713588,0.453460767230423,0,0,0,1.54551675225752,4.129014459926,3.29672923681077,10.7184189539533,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.341467211508268,2.43106717068294,0,0.551530525350042,1.77797382241292,1.85431551515005,2.88827288632634,2.77966932940177,2.28131369901216,1.50901073108861,1.87283014939765,2.43295579138503,1.66562859971278,1.42888107384922,1.39061191133827,2.12200142510076,1.64834360321323,1.76638704161277,2.05721551431249,1.06485483695602,2.38436189947321,2.32554266611726,2.1645157495526,1.60767754994185,1.46342378298218,2.89376682581627,2.17286582153379,2.80571135828869,2.37270036248348,2.1670986122624,3.27384834535751,1.70430525304563,4.05103883060397,0.499621155875892,4.44470056046276,4.94203424311086,2.67803664896381,8.16188250742207,13.216466630364|short_description=p1@Sell}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20343 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P18337,uniprot:Q3TCF3,uniprot:E9Q5W7,uniprot:Q3UV83 | |||
|association_with_transcript=0bp_to_ENSMUST00000027871,ENSMUST00000097491,ENSMUST00000167117,NM_001164059,NM_011346,uc007dhy.2,uc011wuv.1_5end | |||
|cluster_id=chr1:165992201..165992229,+ | |||
|description=CAGE_peak_1_at_Sell_5end | |||
|id=chr1:165992201..165992229,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.80e-07!32;CL:0002032!2.80e-07!32;CL:0000037!2.80e-07!32;CL:0000566!2.80e-07!32;CL:0000837!2.80e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.18e-08,32;CL:0002032,1.18e-08,32;CL:0000037,1.18e-08,32;CL:0000837,1.18e-08,32;CL:0000791,3.84e-07,9;CL:0000789,3.84e-07,9;CL:0002420,3.84e-07,9;CL:0002419,3.84e-07,9;CL:0000790,3.84e-07,9;CL:0000838,8.38e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.90e-14!70;UBERON:0005057!4.46e-12!51;UBERON:0002193!8.05e-12!48;UBERON:0000077!3.24e-11!97;UBERON:0001041!8.01e-11!92;UBERON:0004177!8.66e-11!29;UBERON:0002390!9.78e-11!45;UBERON:0003061!9.78e-11!45;UBERON:0003104!7.96e-10!131;UBERON:0009142!7.96e-10!131;UBERON:0004119!2.77e-09!130;UBERON:0000925!2.77e-09!130;UBERON:0006595!2.77e-09!130;UBERON:0001007!3.65e-09!128;UBERON:0001555!3.65e-09!128;UBERON:0007026!3.65e-09!128;UBERON:0000926!3.82e-09!193;UBERON:0004120!3.82e-09!193;UBERON:0006603!3.82e-09!193;UBERON:0004921!1.01e-08!126;UBERON:0004185!1.01e-08!126;UBERON:0003408!2.15e-08!24;UBERON:0002370!5.11e-08!23;UBERON:0000974!5.11e-08!23;UBERON:0004807!5.11e-08!23;UBERON:0005058!5.11e-08!23;UBERON:0003351!5.11e-08!23;UBERON:0009113!5.11e-08!23;UBERON:0003295!5.11e-08!23;UBERON:0009722!5.11e-08!23;UBERON:0005562!5.11e-08!23;UBERON:0007690!5.11e-08!23;UBERON:0006562!1.29e-07!24;UBERON:0001557!1.29e-07!24;UBERON:0001042!1.29e-07!24;UBERON:0008814!1.29e-07!24;UBERON:0009145!1.29e-07!24;UBERON:0002530!4.85e-07!65;UBERON:0001004!5.95e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.35e-15,48;UBERON:0002405,9.35e-15,48;UBERON:0002390,1.67e-13,45;UBERON:0003061,1.67e-13,45;UBERON:0004177,1.52e-12,29;UBERON:0005057,1.52e-12,29;UBERON:0000077,1.54e-11,35;UBERON:0001041,1.70e-10,80;UBERON:0003408,7.78e-10,24;UBERON:0002370,2.07e-09,23;UBERON:0000974,2.07e-09,23;UBERON:0004807,2.07e-09,23;UBERON:0005058,2.07e-09,23;UBERON:0003351,2.07e-09,23;UBERON:0009113,2.07e-09,23;UBERON:0003295,2.07e-09,23;UBERON:0009722,2.07e-09,23;UBERON:0005562,2.07e-09,23;UBERON:0007690,2.07e-09,23;UBERON:0006562,1.27e-08,24;UBERON:0001557,1.27e-08,24;UBERON:0001042,1.27e-08,24;UBERON:0008814,1.27e-08,24;UBERON:0009145,1.27e-08,24;UBERON:0004119,3.59e-08,118;UBERON:0000925,3.59e-08,118;UBERON:0006595,3.59e-08,118;UBERON:0001004,4.48e-08,42;UBERON:0001007,4.71e-08,116;UBERON:0001555,4.71e-08,116;UBERON:0007026,4.71e-08,116;UBERON:0000065,1.06e-07,41;UBERON:0005911,1.28e-07,69;UBERON:0004921,1.30e-07,114;UBERON:0002530,2.03e-07,65;UBERON:0002368,7.71e-07,60;UBERON:0000949,8.46e-07,72 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,1020.07425518845,99.5376265612284,113.989424318811,38.1816069142876,28.7977493973164,774.340901478844,859.604816986001,95.9356114029109,157.120807494505,37.0767795407918,675.246764949308,740.555055904595,464.282279067045,8.24919914465377,3.27660138962921,0.261199789138935,3.99981056983517,5.50582274561208,0,0,0,0.380046838912748,1.76421090831952,2.88249663851896,0,0,0,0,0,0,605.615269676306,482.865242915709,489.494700615501,1006.46407602107,950.116269577198,580.67038222526,0,0,0,0,0,0,0,0,0,535.562078536295,548.373779360576,896.026068513809,0.514518872071894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0,0,0.30559649555362,0,0,0,0,0,0.579728977403356,4.30211938490693,0,0,0.649776417447669,0.448026887097336,30.6168835887219,0,0,0,0,0,0,0,0,0,0,24.2069825004407,953.927163356181,2.82040064223167,1.73485326766136,1.21786191324856,1.61430848079241,1.95939432718409,1.52865319276416,1.0053327306374,0.988779870937496,17.3519228303894,205.229648052371,5.50007289821191,33.5679108059798,32.4866419600599,3.72783522436244,1.17112318804619,0,1.53274233125155,416.597187907085,271.755937140014,339.277506285083,0.299581278809645,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0.203678727700633,62.7011131874869,0.505445516867349,1.89397670297827,0,0,0,0.90422890701429,0.272145996605311,0.12811372028485,0.0937017245597288,0,0,0,0,0.43839146485515,0.556094498451196,1.74126083261083,0.823128545631774,0.199034266818493,397.452664019291,205.106281970428,194.367833586585,0,0,0,0.473489471170421,1.57411385397923,0.308534225774757,0.465067889500816,0.804820204198858,0.817357396570186,0.16455984991348,1.97000956894914,1.54030738137126,2.77779976108131,5.04965265169416,3.62357330653004,0.630869845692382,0,1.65209391491899,2.11560453330835,0.213288250535234,0.232236671860439,1.41754207454303,0.605050573870028,0.889512175379481,0.760902504450237,5.21981967698963,0.658795818896044,1.75934646160189,1.59165177632921,3.11942539390592,8.08937467788799,2.37751854862164,1.7922714592893,0,0.228497025219458,0,0.203651327845314,0.775809948670503,0.49095073923223,0.822074982615345,1.91893192373483,1.09899109488962,1.60416313098341,3.26097889795864,3.17005700860579,4.52085688760367,6.2961391467759,11.1573066763677,16.8824011826692,18.0784354764808,19.2756412092043,15.7271169971784,9.60964946158285,7.18841032636773,10.0478055870496,5.30464044294753,2.52578877947112,1.25578189465339,2.41221760681684,113.068952381962,0,0.162964976442026,1.01847051465113,0.469380496577004,1.34005005953453,2.61848004974615,2.14647012643579,13.3989872490262,11.5161638617363,9.8861956567642,44.0792316585335,43.1712454664739,26.3261286618351,0,2.17562273527484,18.1952781017043,20.9711927191597,0.321101179975584,0,0,5.04941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,1.41940085208269,0.890328018336276,0.651547837414304,5.27904393512113,10.619611067197,0,0.302323556964751,0.943025398779491,1.77181135728464,1.53717573971964,1.80899805217755,0,3.92147116223193,14.5376908650475,4.21674434299995,3.09406629744561,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0,0.164549020602121,0,2.11204537257339,1.27099242518292,1.32317038832977,0.8244312647074,0.322928853391811,0.542816324353403,0.119372344003136,0.164140899745061,8.74442509889552,2.22510362412612,167.1117214203,35.7049281576375,89.0785676648313,47.6572196221868,106.484803394679,114.617864776468,150.090953684574,184.595965614905,133.915774616487,0.954670618015114,0.474503990371703,1.21991680276109,0.648032044930808,0.418176592028937,1.09181281873089,0.674321731924103,1.40510874733071,1.30877970992015,2.85152941241944,33.552322906694,0,0,0,0.777804753376191,0.645799117388655,1.18269287843545,1.17357238645754,0.2604087696879,0,0,0.288030006257865,175.702183069267,83.3200634842575,167.521571135833,140.184567993041,91.840694877418,90.4000164254755,76.4443058947002,89.3521639406192,99.7548525487699,73.0823275821448,83.1816027378934,110.614694639619,108.623169211932,107.877380713588,0.453460767230423,0,0,0,1.54551675225752,4.129014459926,3.29672923681077,10.7184189539533,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0,0,0,0.341467211508268,2.43106717068294,0,0.551530525350042,1.77797382241292,1.85431551515005,2.88827288632634,2.77966932940177,2.28131369901216,1.50901073108861,1.87283014939765,2.43295579138503,1.66562859971278,1.42888107384922,1.39061191133827,2.12200142510076,1.64834360321323,1.76638704161277,2.05721551431249,1.06485483695602,2.38436189947321,2.32554266611726,2.1645157495526,1.60767754994185,1.46342378298218,2.89376682581627,2.17286582153379,2.80571135828869,2.37270036248348,2.1670986122624,3.27384834535751,1.70430525304563,4.05103883060397,0.499621155875892,4.44470056046276,4.94203424311086,2.67803664896381,8.16188250742207,13.216466630364 | |||
|short_description=p1@Sell | |||
}} |
Revision as of 03:41, 5 August 2015
Short description: | p1@Sell |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sell_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000027871, ENSMUST00000097491, ENSMUST00000167117, NM_001164059, NM_011346, uc007dhy.2, uc011wuv.1_5end |
EntrezGene: | 20343 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.18e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.18e-08 | 32 |
hematopoietic stem cell | 1.18e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.18e-08 | 32 |
mature alpha-beta T cell | 3.84e-07 | 9 |
alpha-beta T cell | 3.84e-07 | 9 |
immature T cell | 3.84e-07 | 9 |
mature T cell | 3.84e-07 | 9 |
immature alpha-beta T cell | 3.84e-07 | 9 |
lymphoid lineage restricted progenitor cell | 8.38e-07 | 12 |