FFCP PHASE1:Mm9::chr17:47641898..47641909,+: Difference between revisions
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{{FFCP|EntrezGene=12445|HGNC=|MCL_coexpression_id=4|UniProt=P30282,Q3TSW4,Q3TWY0|association_with_transcript=-90bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end|description=CAGE_peak_14_at_Ccnd3_5end|id=chr17:47641898..47641909,+|ontology_enrichment_celltype=CL:0000791!4.08e-09!9;CL:0000789!4.08e-09!9;CL:0002420!4.08e-09!9;CL:0002419!4.08e-09!9;CL:0000790!4.08e-09!9;CL:0000838!4.20e-09!12;CL:0000084!2.10e-08!11;CL:0000827!2.10e-08!11;CL:0000624!3.06e-08!8;CL:0000542!4.32e-08!13;CL:0000051!4.32e-08!13;CL:0002031!6.54e-08!25|ontology_enrichment_celltype_v019_2=CL:0000791,6.42e-18,9;CL:0000789,6.42e-18,9;CL:0002420,6.42e-18,9;CL:0002419,6.42e-18,9;CL:0000790,6.42e-18,9;CL:0000084,1.36e-14,11;CL:0000827,1.36e-14,11;CL:0000624,2.73e-14,8;CL:0000838,2.40e-13,12;CL:0000542,2.74e-12,13;CL:0000051,2.74e-12,13;CL:0000738,2.69e-09,17;CL:0002087,2.69e-09,17;CL:0002031,3.09e-08,25;CL:0000893,2.04e-07,6;CL:0002489,2.04e-07,6;CL:0000898,2.04e-07,6;CL:0000809,2.04e-07,6;CL:0000810,2.04e-07,6;CL:0000895,2.04e-07,6;CL:0000808,2.04e-07,6;CL:0000894,2.04e-07,6;CL:0000806,2.04e-07,6;CL:0000807,2.04e-07,6;CL:0000805,2.04e-07,6;CL:0002425,2.04e-07,6;CL:0002436,2.04e-07,6;CL:0002427,2.04e-07,6;CL:0002428,2.04e-07,6;CL:0002429,2.04e-07,6;CL:0002433,2.04e-07,6;CL:0002431,2.04e-07,6;CL:0002432,2.04e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003408!1.56e-14!24;UBERON:0004177!7.97e-14!29;UBERON:0002370!9.36e-14!23;UBERON:0000974!9.36e-14!23;UBERON:0004807!9.36e-14!23;UBERON:0005058!9.36e-14!23;UBERON:0003351!9.36e-14!23;UBERON:0009113!9.36e-14!23;UBERON:0003295!9.36e-14!23;UBERON:0009722!9.36e-14!23;UBERON:0005562!9.36e-14!23;UBERON:0007690!9.36e-14!23;UBERON:0006562!7.63e-13!24;UBERON:0001557!7.63e-13!24;UBERON:0001042!7.63e-13!24;UBERON:0008814!7.63e-13!24;UBERON:0009145!7.63e-13!24;UBERON:0002390!1.18e-11!45;UBERON:0003061!1.18e-11!45;UBERON:0002193!3.67e-11!48;UBERON:0000072!1.53e-10!27;UBERON:0001004!5.74e-10!42;UBERON:0000065!2.40e-09!41;UBERON:0003081!1.10e-08!88;UBERON:0000063!4.17e-08!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.62e-44,23;UBERON:0000974,3.62e-44,23;UBERON:0004807,3.62e-44,23;UBERON:0005058,3.62e-44,23;UBERON:0003351,3.62e-44,23;UBERON:0009113,3.62e-44,23;UBERON:0003295,3.62e-44,23;UBERON:0009722,3.62e-44,23;UBERON:0005562,3.62e-44,23;UBERON:0007690,3.62e-44,23;UBERON:0006562,3.07e-42,24;UBERON:0003408,3.07e-42,24;UBERON:0001557,3.07e-42,24;UBERON:0001042,3.07e-42,24;UBERON:0008814,3.07e-42,24;UBERON:0009145,3.07e-42,24;UBERON:0000072,2.59e-37,27;UBERON:0004177,1.36e-34,29;UBERON:0005057,1.36e-34,29;UBERON:0000077,2.71e-28,35;UBERON:0007811,1.91e-27,36;UBERON:0002390,1.47e-24,45;UBERON:0003061,1.47e-24,45;UBERON:0000065,7.86e-24,41;UBERON:0001004,3.28e-23,42;UBERON:0002193,7.01e-23,48;UBERON:0002405,7.01e-23,48;UBERON:0000153,1.28e-22,43;UBERON:0003929,3.43e-17,55;UBERON:0002368,1.44e-15,60;UBERON:0002530,3.43e-14,65;UBERON:0000490,6.10e-14,66;UBERON:0005911,3.11e-13,69;UBERON:0000949,1.39e-12,72;UBERON:0003081,1.53e-11,87;UBERON:0001041,4.34e-11,80;UBERON:0000926,1.14e-07,120;UBERON:0004120,1.14e-07,120;UBERON:0006603,1.14e-07,120;UBERON:0004921,4.68e-07,114;UBERON:0001007,6.83e-07,116;UBERON:0001555,6.83e-07,116;UBERON:0007026,6.83e-07,116;UBERON:0004119,9.85e-07,118;UBERON:0000925,9.85e-07,118;UBERON:0006595,9.85e-07,118|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0,6.84353614240354,0.563154888606667,0.468129052643987,1.36974374580404,0.957265907944037,6.84802919724823,3.58423649917889,0,0.404950534779652,0,0.946386496074713,0.685572168028694,2.12194825899015,0.510259740906419,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0.782391344348039,0,0,0,0,0,0.503347818173209,2.17608642603403,3.36093799142464,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0.410082683163076,0.228778173206523,0.509935289981566,0.139951452323658,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,4.74016680942267,0,0.308132871494482,1.94881234466693,4.47566739168704,6.55648470778174,5.88957702647847,5.75989155980851,7.87538309595551,7.01102621225999,9.47766140286301,9.35595655101623,6.44619338990207,10.5189211963412,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0,0,0.789209134313529,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0|short_description=p14@Ccnd3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12445 | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P30282,uniprot:Q3TSW4,uniprot:Q3TWY0 | |||
|association_with_transcript=-90bp_to_ENSMUST00000171031,NM_001081635,NM_001081636,uc008cvk.1,uc008cvl.1,uc008cvm.1_5end | |||
|cluster_id=chr17:47641898..47641909,+ | |||
|description=CAGE_peak_14_at_Ccnd3_5end | |||
|id=chr17:47641898..47641909,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.08e-09!9;CL:0000789!4.08e-09!9;CL:0002420!4.08e-09!9;CL:0002419!4.08e-09!9;CL:0000790!4.08e-09!9;CL:0000838!4.20e-09!12;CL:0000084!2.10e-08!11;CL:0000827!2.10e-08!11;CL:0000624!3.06e-08!8;CL:0000542!4.32e-08!13;CL:0000051!4.32e-08!13;CL:0002031!6.54e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,6.42e-18,9;CL:0000789,6.42e-18,9;CL:0002420,6.42e-18,9;CL:0002419,6.42e-18,9;CL:0000790,6.42e-18,9;CL:0000084,1.36e-14,11;CL:0000827,1.36e-14,11;CL:0000624,2.73e-14,8;CL:0000838,2.40e-13,12;CL:0000542,2.74e-12,13;CL:0000051,2.74e-12,13;CL:0000738,2.69e-09,17;CL:0002087,2.69e-09,17;CL:0002031,3.09e-08,25;CL:0000893,2.04e-07,6;CL:0002489,2.04e-07,6;CL:0000898,2.04e-07,6;CL:0000809,2.04e-07,6;CL:0000810,2.04e-07,6;CL:0000895,2.04e-07,6;CL:0000808,2.04e-07,6;CL:0000894,2.04e-07,6;CL:0000806,2.04e-07,6;CL:0000807,2.04e-07,6;CL:0000805,2.04e-07,6;CL:0002425,2.04e-07,6;CL:0002436,2.04e-07,6;CL:0002427,2.04e-07,6;CL:0002428,2.04e-07,6;CL:0002429,2.04e-07,6;CL:0002433,2.04e-07,6;CL:0002431,2.04e-07,6;CL:0002432,2.04e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.56e-14!24;UBERON:0004177!7.97e-14!29;UBERON:0002370!9.36e-14!23;UBERON:0000974!9.36e-14!23;UBERON:0004807!9.36e-14!23;UBERON:0005058!9.36e-14!23;UBERON:0003351!9.36e-14!23;UBERON:0009113!9.36e-14!23;UBERON:0003295!9.36e-14!23;UBERON:0009722!9.36e-14!23;UBERON:0005562!9.36e-14!23;UBERON:0007690!9.36e-14!23;UBERON:0006562!7.63e-13!24;UBERON:0001557!7.63e-13!24;UBERON:0001042!7.63e-13!24;UBERON:0008814!7.63e-13!24;UBERON:0009145!7.63e-13!24;UBERON:0002390!1.18e-11!45;UBERON:0003061!1.18e-11!45;UBERON:0002193!3.67e-11!48;UBERON:0000072!1.53e-10!27;UBERON:0001004!5.74e-10!42;UBERON:0000065!2.40e-09!41;UBERON:0003081!1.10e-08!88;UBERON:0000063!4.17e-08!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.62e-44,23;UBERON:0000974,3.62e-44,23;UBERON:0004807,3.62e-44,23;UBERON:0005058,3.62e-44,23;UBERON:0003351,3.62e-44,23;UBERON:0009113,3.62e-44,23;UBERON:0003295,3.62e-44,23;UBERON:0009722,3.62e-44,23;UBERON:0005562,3.62e-44,23;UBERON:0007690,3.62e-44,23;UBERON:0006562,3.07e-42,24;UBERON:0003408,3.07e-42,24;UBERON:0001557,3.07e-42,24;UBERON:0001042,3.07e-42,24;UBERON:0008814,3.07e-42,24;UBERON:0009145,3.07e-42,24;UBERON:0000072,2.59e-37,27;UBERON:0004177,1.36e-34,29;UBERON:0005057,1.36e-34,29;UBERON:0000077,2.71e-28,35;UBERON:0007811,1.91e-27,36;UBERON:0002390,1.47e-24,45;UBERON:0003061,1.47e-24,45;UBERON:0000065,7.86e-24,41;UBERON:0001004,3.28e-23,42;UBERON:0002193,7.01e-23,48;UBERON:0002405,7.01e-23,48;UBERON:0000153,1.28e-22,43;UBERON:0003929,3.43e-17,55;UBERON:0002368,1.44e-15,60;UBERON:0002530,3.43e-14,65;UBERON:0000490,6.10e-14,66;UBERON:0005911,3.11e-13,69;UBERON:0000949,1.39e-12,72;UBERON:0003081,1.53e-11,87;UBERON:0001041,4.34e-11,80;UBERON:0000926,1.14e-07,120;UBERON:0004120,1.14e-07,120;UBERON:0006603,1.14e-07,120;UBERON:0004921,4.68e-07,114;UBERON:0001007,6.83e-07,116;UBERON:0001555,6.83e-07,116;UBERON:0007026,6.83e-07,116;UBERON:0004119,9.85e-07,118;UBERON:0000925,9.85e-07,118;UBERON:0006595,9.85e-07,118 | |||
|phase1_expression=0,0,0.454999239389536,0.30246421130683,0,0,0,6.84353614240354,0.563154888606667,0.468129052643987,1.36974374580404,0.957265907944037,6.84802919724823,3.58423649917889,0,0.404950534779652,0,0.946386496074713,0.685572168028694,2.12194825899015,0.510259740906419,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0.288851619751275,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0.782391344348039,0,0,0,0,0,0.503347818173209,2.17608642603403,3.36093799142464,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.29688427812965,0,0,0,0.150722640552623,0,0,0.494389935468748,0,0,0,0.220841518460394,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0.299581278809645,0,0,0,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0,0,0.147610147979602,0.156998727841375,0,0,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0.238043640886014,0.195133647857799,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0.504941854408746,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0,0.404810701674894,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0.185194527369712,0,0.410082683163076,0.228778173206523,0.509935289981566,0.139951452323658,0.276399947608848,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0.299033092087958,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,4.74016680942267,0,0.308132871494482,1.94881234466693,4.47566739168704,6.55648470778174,5.88957702647847,5.75989155980851,7.87538309595551,7.01102621225999,9.47766140286301,9.35595655101623,6.44619338990207,10.5189211963412,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0.294397840268795,0,0,0,0,0,0,0,0.789209134313529,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p14@Ccnd3 | |||
}} |
Revision as of 00:16, 5 August 2015
Short description: | p14@Ccnd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_Ccnd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -90bp_to_ENSMUST00000171031, NM_001081635, NM_001081636, uc008cvk.1, uc008cvl.1, uc008cvm.1_5end |
EntrezGene: | 12445 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data