FFCP PHASE1:Mm9::chr11:96144282..96144308,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=249|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:96144282..96144308,+|id=chr11:96144282..96144308,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002612,2.82e-12,3;CL:0002611,1.50e-08,2;CL:0000540,1.25e-07,33;CL:0000047,1.25e-07,33;CL:0000031,1.25e-07,33;CL:0000404,1.25e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!5.70e-18!21;UBERON:0002113!2.76e-12!14;UBERON:0003918!2.76e-12!14;UBERON:0005095!2.76e-12!14;UBERON:0007687!2.76e-12!14;UBERON:0006554!3.38e-10!16;UBERON:0002342!6.08e-10!10;UBERON:0005062!6.08e-10!10;UBERON:0001008!2.40e-09!17;UBERON:0002240!1.78e-08!6;UBERON:0005174!1.78e-08!6;UBERON:0001137!1.78e-08!6;UBERON:0001948!2.36e-07!5;UBERON:0002315!2.36e-07!5;UBERON:0003064!4.93e-07!14;UBERON:0002369!8.95e-07!7;UBERON:0006858!8.95e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.40e-22,6;UBERON:0005174,1.40e-22,6;UBERON:0001137,1.40e-22,6;UBERON:0000489,1.65e-22,21;UBERON:0001948,3.57e-19,5;UBERON:0002315,3.57e-19,5;UBERON:0003076,5.03e-19,12;UBERON:0003057,5.03e-19,12;UBERON:0002257,2.82e-12,3;UBERON:0010313,2.37e-11,3;UBERON:0002342,2.37e-11,3;UBERON:0002005,2.37e-11,3;UBERON:0005428,2.37e-11,3;UBERON:0005062,2.37e-11,3;UBERON:0003103,7.99e-10,43;UBERON:0002256,1.50e-08,2;UBERON:0002113,3.24e-08,14;UBERON:0003918,3.24e-08,14;UBERON:0011143,3.24e-08,14;UBERON:0005095,3.24e-08,14;UBERON:0007687,3.24e-08,14;UBERON:0001896,3.69e-08,2;UBERON:0002298,3.69e-08,2;UBERON:0005290,3.69e-08,2;UBERON:0010096,3.69e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7108041422092,14.7981922437581,0,0,0,0,0,0,0,0,0,0,0,0,15.9099436155781,17.6540884190888,34.11109858603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,1.04091196059682,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,1.38233250462643,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.870848794270651,2.77995034277042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.928946687441754,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.89667900953082,1.02823661348756,1.1270773567308,1.62921062276251,0.775809948670503,1.26244475802573,0.569128834118316,0.147610147979602,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,2.2085575359138,1.56175497718655,4.30846795465598,0,0,0,0,1.46127928955656,0.395287777946524,0,0.141940085208269,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.512200817262403,0.729320151204882,1.25767897576789,0.551530525350042,0.666740183404846,0,0,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.384150914429216,0.631790158511746,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0,0.726732083161643,0,0.507687647350059,0.365855945745545,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.985044823755635,0,1.23949472948773,0.771626443924566,0.249810577937946,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421|short_description=p@chr11:96144282..96144308,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:96144282..96144308,+ | |||
|description=CAGE_peak_at_chr11:96144282..96144308,+ | |||
|id=chr11:96144282..96144308,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.82e-12,3;CL:0002611,1.50e-08,2;CL:0000540,1.25e-07,33;CL:0000047,1.25e-07,33;CL:0000031,1.25e-07,33;CL:0000404,1.25e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!5.70e-18!21;UBERON:0002113!2.76e-12!14;UBERON:0003918!2.76e-12!14;UBERON:0005095!2.76e-12!14;UBERON:0007687!2.76e-12!14;UBERON:0006554!3.38e-10!16;UBERON:0002342!6.08e-10!10;UBERON:0005062!6.08e-10!10;UBERON:0001008!2.40e-09!17;UBERON:0002240!1.78e-08!6;UBERON:0005174!1.78e-08!6;UBERON:0001137!1.78e-08!6;UBERON:0001948!2.36e-07!5;UBERON:0002315!2.36e-07!5;UBERON:0003064!4.93e-07!14;UBERON:0002369!8.95e-07!7;UBERON:0006858!8.95e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.40e-22,6;UBERON:0005174,1.40e-22,6;UBERON:0001137,1.40e-22,6;UBERON:0000489,1.65e-22,21;UBERON:0001948,3.57e-19,5;UBERON:0002315,3.57e-19,5;UBERON:0003076,5.03e-19,12;UBERON:0003057,5.03e-19,12;UBERON:0002257,2.82e-12,3;UBERON:0010313,2.37e-11,3;UBERON:0002342,2.37e-11,3;UBERON:0002005,2.37e-11,3;UBERON:0005428,2.37e-11,3;UBERON:0005062,2.37e-11,3;UBERON:0003103,7.99e-10,43;UBERON:0002256,1.50e-08,2;UBERON:0002113,3.24e-08,14;UBERON:0003918,3.24e-08,14;UBERON:0011143,3.24e-08,14;UBERON:0005095,3.24e-08,14;UBERON:0007687,3.24e-08,14;UBERON:0001896,3.69e-08,2;UBERON:0002298,3.69e-08,2;UBERON:0005290,3.69e-08,2;UBERON:0010096,3.69e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7108041422092,14.7981922437581,0,0,0,0,0,0,0,0,0,0,0,0,15.9099436155781,17.6540884190888,34.11109858603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,1.03909497345377,1.04091196059682,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,1.38233250462643,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.870848794270651,2.77995034277042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639864751605702,0.928946687441754,0.128867461322093,0,0,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0,0,1.89667900953082,1.02823661348756,1.1270773567308,1.62921062276251,0.775809948670503,1.26244475802573,0.569128834118316,0.147610147979602,0.627994911365499,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0,2.40825884981688,1.99259867206745,0,0,2.2085575359138,1.56175497718655,4.30846795465598,0,0,0,0,1.46127928955656,0.395287777946524,0,0.141940085208269,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1255181206306,0,0.206386867963223,0,0,0,0,0,0,0,0,1.73984796469624,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0.375364950902364,0.73260649706906,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.830298780673413,0.399024873401031,0.512200817262403,0.729320151204882,1.25767897576789,0.551530525350042,0.666740183404846,0,0,0.252697211763798,0.50695859978048,0.565879024158229,0.468207537349412,0.384150914429216,0.631790158511746,0.952587382566147,0.579421629724277,0.578727661391115,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,0,0.726732083161643,0,0.507687647350059,0.365855945745545,0.526139422875686,1.08643291076689,0.561142271657738,0.474540072496697,0.985044823755635,0,1.23949472948773,0.771626443924566,0.249810577937946,0.233931608445408,0.429742108096597,0.57386499620653,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr11:96144282..96144308,+ | |||
}} |
Latest revision as of 10:22, 4 August 2015
Short description: | p@chr11:96144282..96144308, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:96144282..96144308, + |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.82e-12 | 3 |
neuron of the dorsal spinal cord | 1.50e-08 | 2 |
neuron | 1.25e-07 | 33 |
neuronal stem cell | 1.25e-07 | 33 |
neuroblast | 1.25e-07 | 33 |
electrically signaling cell | 1.25e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.40e-22 | 6 |
dorsal region element | 1.40e-22 | 6 |
dorsum | 1.40e-22 | 6 |
cavitated compound organ | 1.65e-22 | 21 |
regional part of spinal cord | 3.57e-19 | 5 |
gray matter of spinal cord | 3.57e-19 | 5 |
posterior neural tube | 5.03e-19 | 12 |
chordal neural plate | 5.03e-19 | 12 |
ventral horn of spinal cord | 2.82e-12 | 3 |
neural crest-derived structure | 2.37e-11 | 3 |
neural crest | 2.37e-11 | 3 |
enteric nervous system | 2.37e-11 | 3 |
vagal neural crest | 2.37e-11 | 3 |
neural fold | 2.37e-11 | 3 |
compound organ | 7.99e-10 | 43 |
dorsal horn of spinal cord | 1.50e-08 | 2 |
kidney | 3.24e-08 | 14 |
kidney mesenchyme | 3.24e-08 | 14 |
upper urinary tract | 3.24e-08 | 14 |
kidney rudiment | 3.24e-08 | 14 |
kidney field | 3.24e-08 | 14 |
medulla oblongata | 3.69e-08 | 2 |
brainstem | 3.69e-08 | 2 |
myelencephalon | 3.69e-08 | 2 |
future myelencephalon | 3.69e-08 | 2 |