UBERON:0002315
From FANTOM5_SSTAR
| Name: | gray matter of spinal cord | |
|---|---|---|
| Namespace: | FANTOM | |
| Definition: | "the ridge-shaped grey matter of the spinal cord that extends longitudunally through the center of each half of the spinal cord, and are largely or entirely composed of nerve cell bodies and their dendrites and some supportive tissue." [MP:0008503] | |
| Xrefs: |
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| Synonyms: |
"gray matter of neuraxis of spinal cord" EXACT [OBOL:automatic] "grey matter of spinal cord" EXACT [] "grey substance of spinal cord" EXACT [] "spinal cord gray matter" EXACT [OBOL:automatic] "spinal cord gray matter of neuraxis" EXACT [OBOL:automatic] "spinal cord grey matter" EXACT [] "spinal cord grey substance" EXACT [OBOL:automatic] | |
| Alt_id: | UBERON:FMA_83926-MA_0000002 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002020(gray matter) |
|---|---|
| part_of: | UBERON:0002240(spinal cord) |
Children
| part of: | UBERON:0002256 (dorsal horn of spinal cord),UBERON:0002257 (ventral horn of spinal cord) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
- 11648-122E1 (Mouse Neurons - ventral spinal cord, donor3)
- 11720-123D1 (Mouse Neurons - dorsal spinal cord, donor1)
- 11725-123D6 (Mouse Neurons - ventral spinal cord, donor1)
- 11738-123F1 (Mouse Neurons - dorsal spinal cord, donor2)
- 11743-123F6 (Mouse Neurons - ventral spinal cord, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002315 (gray matter of spinal cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
