FFCP PHASE1:Mm9::chr10:28556537..28556541,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:28556537..28556541,+|id=chr10:28556537..28556541,+|ontology_enrichment_celltype=CL:0000791!4.03e-11!9;CL:0000789!4.03e-11!9;CL:0002420!4.03e-11!9;CL:0002419!4.03e-11!9;CL:0000790!4.03e-11!9;CL:0000084!5.59e-09!11;CL:0000827!5.59e-09!11;CL:0000624!7.67e-09!8;CL:0000838!3.55e-08!12;CL:0000542!1.70e-07!13;CL:0000051!1.70e-07!13|ontology_enrichment_celltype_v019_2=CL:0000625,7.68e-08,1;CL:0000791,4.59e-07,9;CL:0000789,4.59e-07,9;CL:0002420,4.59e-07,9;CL:0002419,4.59e-07,9;CL:0000790,4.59e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.88e-30!23;UBERON:0000974!1.88e-30!23;UBERON:0004807!1.88e-30!23;UBERON:0005058!1.88e-30!23;UBERON:0003351!1.88e-30!23;UBERON:0009113!1.88e-30!23;UBERON:0003295!1.88e-30!23;UBERON:0009722!1.88e-30!23;UBERON:0005562!1.88e-30!23;UBERON:0007690!1.88e-30!23;UBERON:0006562!4.94e-29!24;UBERON:0003408!4.94e-29!24;UBERON:0001557!4.94e-29!24;UBERON:0001042!4.94e-29!24;UBERON:0008814!4.94e-29!24;UBERON:0009145!4.94e-29!24;UBERON:0000072!2.10e-25!27;UBERON:0000065!2.19e-24!41;UBERON:0001004!1.06e-23!42;UBERON:0004177!2.10e-23!29;UBERON:0000063!9.00e-19!35;UBERON:0002390!1.14e-17!45;UBERON:0003061!1.14e-17!45;UBERON:0002193!2.59e-16!48;UBERON:0005911!1.05e-12!69;UBERON:0005057!9.29e-12!51;UBERON:0003929!1.20e-10!55;UBERON:0002405!6.24e-10!70;UBERON:0002368!1.82e-09!60;UBERON:0003081!4.26e-09!88;UBERON:0002530!1.81e-08!65;UBERON:0001041!1.93e-08!92;UBERON:0000490!2.74e-08!66;UBERON:0000077!8.73e-08!97;UBERON:0000949!2.60e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.44e-35,23;UBERON:0000974,6.44e-35,23;UBERON:0004807,6.44e-35,23;UBERON:0005058,6.44e-35,23;UBERON:0003351,6.44e-35,23;UBERON:0009113,6.44e-35,23;UBERON:0003295,6.44e-35,23;UBERON:0009722,6.44e-35,23;UBERON:0005562,6.44e-35,23;UBERON:0007690,6.44e-35,23;UBERON:0006562,1.99e-33,24;UBERON:0003408,1.99e-33,24;UBERON:0001557,1.99e-33,24;UBERON:0001042,1.99e-33,24;UBERON:0008814,1.99e-33,24;UBERON:0009145,1.99e-33,24;UBERON:0000072,1.29e-29,27;UBERON:0004177,1.64e-27,29;UBERON:0005057,1.64e-27,29;UBERON:0000077,1.24e-22,35;UBERON:0007811,5.59e-22,36;UBERON:0000065,3.53e-19,41;UBERON:0001004,1.07e-18,42;UBERON:0000153,3.06e-18,43;UBERON:0002390,2.20e-17,45;UBERON:0003061,2.20e-17,45;UBERON:0002193,3.11e-16,48;UBERON:0002405,3.11e-16,48;UBERON:0003929,4.94e-14,55;UBERON:0002368,8.99e-13,60;UBERON:0002530,1.05e-11,65;UBERON:0000490,1.65e-11,66;UBERON:0005911,5.84e-11,69;UBERON:0000949,1.87e-10,72;UBERON:0001041,2.71e-09,80;UBERON:0003081,1.90e-08,87|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0.319088635981346,0.856003649656029,1.22388563386596,0,0.202475267389826,0,0,0.274228867211478,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.205421914329655,0.389762468933385,0.358053391334963,1.78813219303138,3.12508168751919,4.57837534241189,3.93769154797776,3.96275394605999,4.63800451629466,5.06780979846713,6.73482891482306,6.66198342434943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:28556537..28556541,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:28556537..28556541,+ | |||
|description=CAGE_peak_at_chr10:28556537..28556541,+ | |||
|id=chr10:28556537..28556541,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.03e-11!9;CL:0000789!4.03e-11!9;CL:0002420!4.03e-11!9;CL:0002419!4.03e-11!9;CL:0000790!4.03e-11!9;CL:0000084!5.59e-09!11;CL:0000827!5.59e-09!11;CL:0000624!7.67e-09!8;CL:0000838!3.55e-08!12;CL:0000542!1.70e-07!13;CL:0000051!1.70e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.68e-08,1;CL:0000791,4.59e-07,9;CL:0000789,4.59e-07,9;CL:0002420,4.59e-07,9;CL:0002419,4.59e-07,9;CL:0000790,4.59e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.88e-30!23;UBERON:0000974!1.88e-30!23;UBERON:0004807!1.88e-30!23;UBERON:0005058!1.88e-30!23;UBERON:0003351!1.88e-30!23;UBERON:0009113!1.88e-30!23;UBERON:0003295!1.88e-30!23;UBERON:0009722!1.88e-30!23;UBERON:0005562!1.88e-30!23;UBERON:0007690!1.88e-30!23;UBERON:0006562!4.94e-29!24;UBERON:0003408!4.94e-29!24;UBERON:0001557!4.94e-29!24;UBERON:0001042!4.94e-29!24;UBERON:0008814!4.94e-29!24;UBERON:0009145!4.94e-29!24;UBERON:0000072!2.10e-25!27;UBERON:0000065!2.19e-24!41;UBERON:0001004!1.06e-23!42;UBERON:0004177!2.10e-23!29;UBERON:0000063!9.00e-19!35;UBERON:0002390!1.14e-17!45;UBERON:0003061!1.14e-17!45;UBERON:0002193!2.59e-16!48;UBERON:0005911!1.05e-12!69;UBERON:0005057!9.29e-12!51;UBERON:0003929!1.20e-10!55;UBERON:0002405!6.24e-10!70;UBERON:0002368!1.82e-09!60;UBERON:0003081!4.26e-09!88;UBERON:0002530!1.81e-08!65;UBERON:0001041!1.93e-08!92;UBERON:0000490!2.74e-08!66;UBERON:0000077!8.73e-08!97;UBERON:0000949!2.60e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,6.44e-35,23;UBERON:0000974,6.44e-35,23;UBERON:0004807,6.44e-35,23;UBERON:0005058,6.44e-35,23;UBERON:0003351,6.44e-35,23;UBERON:0009113,6.44e-35,23;UBERON:0003295,6.44e-35,23;UBERON:0009722,6.44e-35,23;UBERON:0005562,6.44e-35,23;UBERON:0007690,6.44e-35,23;UBERON:0006562,1.99e-33,24;UBERON:0003408,1.99e-33,24;UBERON:0001557,1.99e-33,24;UBERON:0001042,1.99e-33,24;UBERON:0008814,1.99e-33,24;UBERON:0009145,1.99e-33,24;UBERON:0000072,1.29e-29,27;UBERON:0004177,1.64e-27,29;UBERON:0005057,1.64e-27,29;UBERON:0000077,1.24e-22,35;UBERON:0007811,5.59e-22,36;UBERON:0000065,3.53e-19,41;UBERON:0001004,1.07e-18,42;UBERON:0000153,3.06e-18,43;UBERON:0002390,2.20e-17,45;UBERON:0003061,2.20e-17,45;UBERON:0002193,3.11e-16,48;UBERON:0002405,3.11e-16,48;UBERON:0003929,4.94e-14,55;UBERON:0002368,8.99e-13,60;UBERON:0002530,1.05e-11,65;UBERON:0000490,1.65e-11,66;UBERON:0005911,5.84e-11,69;UBERON:0000949,1.87e-10,72;UBERON:0001041,2.71e-09,80;UBERON:0003081,1.90e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0,0,0,0.319088635981346,0.856003649656029,1.22388563386596,0,0.202475267389826,0,0,0.274228867211478,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0,0.205421914329655,0.389762468933385,0.358053391334963,1.78813219303138,3.12508168751919,4.57837534241189,3.93769154797776,3.96275394605999,4.63800451629466,5.06780979846713,6.73482891482306,6.66198342434943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:28556537..28556541,+ | |||
}} |
Latest revision as of 07:14, 4 August 2015
Short description: | p@chr10:28556537..28556541, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:28556537..28556541, + |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.68e-08 | 1 |
mature alpha-beta T cell | 4.59e-07 | 9 |
alpha-beta T cell | 4.59e-07 | 9 |
immature T cell | 4.59e-07 | 9 |
mature T cell | 4.59e-07 | 9 |
immature alpha-beta T cell | 4.59e-07 | 9 |