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FFCP PHASE1:Mm9::chr10:128180925..128180966,-: Difference between revisions

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{{FFCP|EntrezGene=13139|HGNC=|MCL_coexpression_id=12|UniProt=O88673|association_with_transcript=145bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end|description=CAGE_peak_2_at_Dgka_5end|id=chr10:128180925..128180966,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000066,2.95e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!6.81e-19!128;UBERON:0001555!6.81e-19!128;UBERON:0007026!6.81e-19!128;UBERON:0004119!2.21e-18!130;UBERON:0000925!2.21e-18!130;UBERON:0006595!2.21e-18!130;UBERON:0004921!1.11e-17!126;UBERON:0004185!1.11e-17!126;UBERON:0005409!1.19e-10!59;UBERON:0000344!2.41e-09!15;UBERON:0003929!2.47e-08!55;UBERON:0000160!3.73e-08!43;UBERON:0001242!4.50e-08!13;UBERON:0000060!4.50e-08!13;UBERON:0001262!4.50e-08!13;UBERON:0004786!4.50e-08!13;UBERON:0004923!5.30e-08!24;UBERON:0000490!5.31e-08!66;UBERON:0005911!1.09e-07!69;UBERON:0003104!5.28e-07!131;UBERON:0009142!5.28e-07!131;UBERON:0000077!9.22e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.37e-26,116;UBERON:0001555,6.37e-26,116;UBERON:0007026,6.37e-26,116;UBERON:0004119,1.46e-25,118;UBERON:0000925,1.46e-25,118;UBERON:0006595,1.46e-25,118;UBERON:0004921,2.58e-24,114;UBERON:0005409,2.58e-17,47;UBERON:0000160,4.76e-15,31;UBERON:0000344,2.54e-11,15;UBERON:0003929,5.74e-10,55;UBERON:0001242,9.90e-10,13;UBERON:0001262,9.90e-10,13;UBERON:0004786,9.90e-10,13;UBERON:0004923,1.29e-09,24;UBERON:0000490,2.89e-09,66;UBERON:0005911,5.26e-09,69;UBERON:0001041,6.42e-09,80;UBERON:0000077,2.13e-08,35;UBERON:0000072,2.05e-07,27;UBERON:0004177,2.47e-07,29;UBERON:0005057,2.47e-07,29;UBERON:0003408,7.84e-07,24;UBERON:0006562,8.43e-07,24;UBERON:0001557,8.43e-07,24;UBERON:0001042,8.43e-07,24;UBERON:0008814,8.43e-07,24;UBERON:0009145,8.43e-07,24;UBERON:0002193,8.67e-07,48;UBERON:0002405,8.67e-07,48|phase1_expression=0,62.4665979674456,46.8649216571222,33.5735274550581,33.0591181764589,13.4303417529512,14.0167584357315,17.6898953114959,1.68946466582,8.66038747391376,0.513653904676515,1.51567102091139,8.56003649656029,15.2985704233245,0.999329285446988,1.21485160433896,2.09868563438444,8.67520954735154,7.81552271552711,3.81950686618227,1.44573593256819,0.397163804803541,1.04479915655574,29.2786133711934,28.2173415712619,45.3643251650866,33.1686737042488,35.1218109277999,41.2350820220331,23.9428623271934,25.9424697466706,0,0,0,1.73310971850765,2.32728503501889,2.24586291888606,4.60384793810598,6.2506827561904,6.80580867165938,7.64700934440319,6.14740936462601,9.22469670759192,0.755380907853464,0.608261587317087,0.734187008646726,0,0,0,0.58328969722285,0.699932108126813,0,5.87239121202077,12.3311564141929,12.4354705682712,0.257259436035947,1.43266719969378,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.921639199537461,0,0,0.52091337055676,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.37863096666592,0.831287161174641,2.6087803983151,0,0,2.15881276655127,3.89865850468601,4.03224198387602,3.7919993435573,0.170430322578058,0,0,0,0,2.54805239706646,0,3.46385665617943,1.26679932737549,2.02209778005913,6.96521666286266,22.7865337609511,2.3750742250372,0,0.304465478312141,1.15307748628029,0.452167921657868,0.940709657085638,0.879666139307728,0.494389935468748,1.3013942122792,4.42305275974937,0.323533699894818,1.98757366614354,1.93950101254089,14.9113408974498,0.585561594023094,0.41889341362691,28.3557331281536,0.359445373517761,1.79970819298022,0.254140454146129,1.79748767285787,0.915001205637253,0.125654352112864,0.347648640384553,0.767146371990992,0.62336413367868,0.324482526135515,0.407357455401265,2.23932547098167,0,0.841767423545896,0.130120442962704,0.229902104433473,0.180062129805349,0.60281927134286,0.204109497453984,0.12811372028485,0.374806898238915,0.258703370739016,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,1.74126083261083,2.05782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.820837320395476,0.56748166682099,0.730999937126662,1.3173006917463,1.74468344388483,0.210289948564127,0,53.1974240603915,27.2384083663451,0.213288250535234,0.232236671860439,0.257734922644187,1.21010114774006,2.66853652613844,2.09248188723815,23.2519240156811,4.28217282282428,6.78605063760728,3.78017296878187,5.65395852645448,21.5716658077013,26.3688420847127,29.273767168392,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.911765658574141,0.758838445491087,3.24742325555125,3.45397201251025,3.45512058981041,5.03969466048153,0.333690211432188,0.393117990226406,0.224862112384854,0.811440485554012,1.20588579876208,1.2731292589071,1.43848068725405,0.972811360650212,0.823684239564244,0,1.48856379067401,1.5601883655728,1.01031551178845,2.33216637578486,4.82443521363367,3.69506380333209,0.189491411770485,0.162964976442026,0,0,0.670025029767263,1.90434912708811,1.95133647857799,1.41871629695572,0.664394068946325,0.956728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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:13139
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=uniprot:O88673
|association_with_transcript=145bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end
|cluster_id=chr10:128180925..128180966,-
|description=CAGE_peak_2_at_Dgka_5end
|id=chr10:128180925..128180966,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,2.95e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001007,6.37e-26,116;UBERON:0001555,6.37e-26,116;UBERON:0007026,6.37e-26,116;UBERON:0004119,1.46e-25,118;UBERON:0000925,1.46e-25,118;UBERON:0006595,1.46e-25,118;UBERON:0004921,2.58e-24,114;UBERON:0005409,2.58e-17,47;UBERON:0000160,4.76e-15,31;UBERON:0000344,2.54e-11,15;UBERON:0003929,5.74e-10,55;UBERON:0001242,9.90e-10,13;UBERON:0001262,9.90e-10,13;UBERON:0004786,9.90e-10,13;UBERON:0004923,1.29e-09,24;UBERON:0000490,2.89e-09,66;UBERON:0005911,5.26e-09,69;UBERON:0001041,6.42e-09,80;UBERON:0000077,2.13e-08,35;UBERON:0000072,2.05e-07,27;UBERON:0004177,2.47e-07,29;UBERON:0005057,2.47e-07,29;UBERON:0003408,7.84e-07,24;UBERON:0006562,8.43e-07,24;UBERON:0001557,8.43e-07,24;UBERON:0001042,8.43e-07,24;UBERON:0008814,8.43e-07,24;UBERON:0009145,8.43e-07,24;UBERON:0002193,8.67e-07,48;UBERON:0002405,8.67e-07,48
|phase1_expression=0,62.4665979674456,46.8649216571222,33.5735274550581,33.0591181764589,13.4303417529512,14.0167584357315,17.6898953114959,1.68946466582,8.66038747391376,0.513653904676515,1.51567102091139,8.56003649656029,15.2985704233245,0.999329285446988,1.21485160433896,2.09868563438444,8.67520954735154,7.81552271552711,3.81950686618227,1.44573593256819,0.397163804803541,1.04479915655574,29.2786133711934,28.2173415712619,45.3643251650866,33.1686737042488,35.1218109277999,41.2350820220331,23.9428623271934,25.9424697466706,0,0,0,1.73310971850765,2.32728503501889,2.24586291888606,4.60384793810598,6.2506827561904,6.80580867165938,7.64700934440319,6.14740936462601,9.22469670759192,0.755380907853464,0.608261587317087,0.734187008646726,0,0,0,0.58328969722285,0.699932108126813,0,5.87239121202077,12.3311564141929,12.4354705682712,0.257259436035947,1.43266719969378,2.06268836910977,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510749352340751,0.921639199537461,0,0,0.52091337055676,0,0,0.45839474333043,0.294628585473668,0.142371680799103,0,0.37863096666592,0.831287161174641,2.6087803983151,0,0,2.15881276655127,3.89865850468601,4.03224198387602,3.7919993435573,0.170430322578058,0,0,0,0,2.54805239706646,0,3.46385665617943,1.26679932737549,2.02209778005913,6.96521666286266,22.7865337609511,2.3750742250372,0,0.304465478312141,1.15307748628029,0.452167921657868,0.940709657085638,0.879666139307728,0.494389935468748,1.3013942122792,4.42305275974937,0.323533699894818,1.98757366614354,1.93950101254089,14.9113408974498,0.585561594023094,0.41889341362691,28.3557331281536,0.359445373517761,1.79970819298022,0.254140454146129,1.79748767285787,0.915001205637253,0.125654352112864,0.347648640384553,0.767146371990992,0.62336413367868,0.324482526135515,0.407357455401265,2.23932547098167,0,0.841767423545896,0.130120442962704,0.229902104433473,0.180062129805349,0.60281927134286,0.204109497453984,0.12811372028485,0.374806898238915,0.258703370739016,0,0.189106080167819,0.351902248327898,0.43839146485515,0.834141747676794,1.74126083261083,2.05782136407943,0,0,0.51469581422943,0,0,0.234526059981096,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0,0.820837320395476,0.56748166682099,0.730999937126662,1.3173006917463,1.74468344388483,0.210289948564127,0,53.1974240603915,27.2384083663451,0.213288250535234,0.232236671860439,0.257734922644187,1.21010114774006,2.66853652613844,2.09248188723815,23.2519240156811,4.28217282282428,6.78605063760728,3.78017296878187,5.65395852645448,21.5716658077013,26.3688420847127,29.273767168392,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.911765658574141,0.758838445491087,3.24742325555125,3.45397201251025,3.45512058981041,5.03969466048153,0.333690211432188,0.393117990226406,0.224862112384854,0.811440485554012,1.20588579876208,1.2731292589071,1.43848068725405,0.972811360650212,0.823684239564244,0,1.48856379067401,1.5601883655728,1.01031551178845,2.33216637578486,4.82443521363367,3.69506380333209,0.189491411770485,0.162964976442026,0,0,0.670025029767263,1.90434912708811,1.95133647857799,1.41871629695572,0.664394068946325,0.956728611944923,1.96635977658886,2.07221978239075,3.90552458170081,4.52373851817817,0,0.983528546038072,1.37968373152366,0.160550589987792,0.703270119553219,0,1.76729649043061,0,0,0.215423397732799,0.477937595905104,0.891194696329576,0.283076530788832,0,0,0.395287777946524,1.92792789853084,0.99358059645788,0,0.488660878060728,0.989820737835213,1.32745138339963,0,0.604647113929502,0.377210159511796,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0,0.632073515871632,1.05418608574999,1.03135543248187,3.40439605753788,0,0.129358683782755,0,0.177340233642274,0.535106452806212,0.658196082408484,0.304464949114599,0,1.27099242518292,3.52845436887939,1.6488625294148,3.87514624070173,1.86970067277283,1.67121281604391,1.14898629821543,16.3229268512716,0.18542530201051,4.44264290074417,0.412773735926445,1.48155621895769,1.50694765603753,2.32380187125743,4.57556346413045,1.86976272993241,1.11961161858926,1.65839968565309,2.86401185404534,0.316335993581135,1.01659733563424,1.94409613479242,2.29997125615916,3.71216358368502,3.77620169877498,1.1571483801547,1.83229159388821,12.0541925161367,2.4853572523477,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,1.8874681996628,0.966336483304024,0.864090018773596,8.84831137758899,0.405450430580328,1.33524244314275,1.29920822977795,2.8644271306797,4.76835251475036,3.96644983415897,4.72606486958647,6.46185279668145,5.86792411243499,6.957006774442,7.40679893622118,7.5045236479457,8.18138315270983,2.26730383615211,0.221985953374065,0.807424709485281,0.671538465456314,3.67060228661162,0.750729901804728,2.93042598827624,7.07415650960917,2.00628841614145,0,0,0,0,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0.243106717068294,0.628839487883947,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,1.51618327058278,2.28131369901216,0.377252682772152,0.936415074698824,0.576226371643824,0.516919220600519,0.952587382566147,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0.715308569841963,0.726732083161643,0.846984423737976,0.25384382367503,0.548783918618318,2.10455769150274,0.679020569229309,0.561142271657738,0.237270036248348,0.394017929502254,0,0.154936841185966,0.385813221962283,0.749431733813838,0.701794825336225,1.07435527024149,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p2@Dgka
}}

Revision as of 03:10, 4 August 2015

Short description:p2@Dgka
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Dgka_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 145bp_to_ENSMUST00000026414, NM_016811, uc007hoc.1_5end
EntrezGene:13139
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Dgka

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I562.47
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I646.86
CD326+ enterocyte, pool1.CNhs13542.11848-124I333.57
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I713.43
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.02
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E917.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E815.30
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.68
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D129.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D228.22
GP2+ M cell, pool1.CNhs13228.11845-124H945.36
GP2+ M cell, pool2.CNhs13231.11846-124I133.17
GP2+ M cell, pool3.CNhs13240.11847-124I235.12
Ileum epithelium, pool1.CNhs13199.10252-104B941.24
Ileum epithelium, pool2.CNhs13232.10253-104C123.94
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C825.94
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G97.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.15
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H49.22
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I912.33
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A112.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.61
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.97
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H728.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.57
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I353.20
intestine, adult.CNhs10496.178-9A327.24
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.09
intestine, neonate N00.CNhs11126.644-26D123.25
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E326.37
intestine, neonate N30.CNhs11131.1384-42G129.27
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I13.25
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H13.46
liver, adult pregnant day01.CNhs10466.508-5B25.04
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.97
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G43.88
skin, neonate N03.CNhs11215.662-22H31.87
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I116.32
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G24.44
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G34.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.87
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B83.78
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I112.05
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B58.85
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C12.86
thymus, embryo E18.CNhs10595.1273-19G44.77
thymus, neonate N02.CNhs11181.1541-43F83.97
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C46.46
thymus, neonate N07.CNhs11211.713-19D35.87
thymus, neonate N10.CNhs11194.748-24E46.96
thymus, neonate N20.CNhs11186.820-7A27.41
thymus, neonate N25.CNhs11125.1362-25G77.50
thymus, neonate N30.CNhs11132.1393-42G28.18
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.81
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell2.95e-0725

Uber anatomy
Ontology termp-valuen
digestive system6.37e-26116
digestive tract6.37e-26116
primitive gut6.37e-26116
endoderm-derived structure1.46e-25118
endoderm1.46e-25118
presumptive endoderm1.46e-25118
subdivision of digestive tract2.58e-24114
gastrointestinal system2.58e-1747
intestine4.76e-1531
mucosa2.54e-1115
gut epithelium5.74e-1055
intestinal mucosa9.90e-1013
wall of intestine9.90e-1013
gastrointestinal system mucosa9.90e-1013
organ component layer1.29e-0924
unilaminar epithelium2.89e-0966
endo-epithelium5.26e-0969
foregut6.42e-0980
mixed endoderm/mesoderm-derived structure2.13e-0835
segment of respiratory tract2.05e-0727
hemopoietic organ2.47e-0729
immune organ2.47e-0729
gland of gut7.84e-0724
pharynx8.43e-0724
upper respiratory tract8.43e-0724
chordate pharynx8.43e-0724
pharyngeal arch system8.43e-0724
pharyngeal region of foregut8.43e-0724
hemolymphoid system8.67e-0748
immune system8.67e-0748
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