FFCP PHASE1:Hg19::chr3:51989390..51989434,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118442 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13301 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZJ7,Q8TAM0 | |||
|association_with_transcript=60bp_to_ENST00000322241,NM_080865,uc003dca.3_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_GPR62_5end | |||
|id=chr3:51989390..51989434,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.63e-25;82!UBERON:0006241;1.06e-13;3!UBERON:0003057;1.06e-13;3!UBERON:0010122;4.17e-09;2!UBERON:0002532;1.40e-07;206!UBERON:0010316;1.40e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.74e-88!57;UBERON:0005068!5.74e-88!57;UBERON:0006241!5.74e-88!57;UBERON:0007135!5.74e-88!57;UBERON:0001017!1.16e-72!82;UBERON:0002616!4.35e-72!59;UBERON:0005743!8.64e-69!86;UBERON:0000073!4.07e-67!94;UBERON:0001016!4.07e-67!94;UBERON:0000955!3.72e-66!69;UBERON:0006238!3.72e-66!69;UBERON:0007023!1.22e-64!115;UBERON:0002780!1.24e-62!41;UBERON:0001890!1.24e-62!41;UBERON:0006240!1.24e-62!41;UBERON:0001893!2.11e-61!34;UBERON:0002020!2.26e-61!34;UBERON:0003528!2.26e-61!34;UBERON:0003080!5.73e-61!42;UBERON:0003075!2.30e-60!86;UBERON:0007284!2.30e-60!86;UBERON:0002791!1.06e-58!33;UBERON:0002346!3.49e-57!90;UBERON:0001869!1.54e-55!32;UBERON:0002619!7.13e-43!22;UBERON:0003056!1.45e-39!61;UBERON:0001950!1.26e-37!20;UBERON:0000956!2.59e-37!25;UBERON:0000203!2.59e-37!25;UBERON:0000033!1.89e-36!123;UBERON:0004121!2.08e-35!169;UBERON:0000924!2.62e-34!173;UBERON:0006601!2.62e-34!173;UBERON:0000153!3.02e-34!129;UBERON:0007811!3.02e-34!129;UBERON:0003076!5.99e-27!15;UBERON:0003057!5.99e-27!15;UBERON:0002308!1.03e-26!9;UBERON:0000125!1.03e-26!9;UBERON:0000025!1.48e-26!194;UBERON:0002420!3.93e-26!9;UBERON:0007245!3.93e-26!9;UBERON:0010009!3.93e-26!9;UBERON:0010011!3.93e-26!9;UBERON:0000454!3.93e-26!9;UBERON:0004732!8.76e-22!13;UBERON:0009663!5.46e-21!7;UBERON:0004111!5.10e-20!241;UBERON:0004733!5.44e-19!12;UBERON:0002028!5.44e-19!12;UBERON:0007277!5.44e-19!12;UBERON:0002298!8.20e-19!8;UBERON:0000200!8.90e-18!6;UBERON:0000477!9.47e-17!286;UBERON:0000483!2.40e-15!309;UBERON:0000119!4.48e-15!312;UBERON:0000349!6.89e-15!5;UBERON:0001871!3.40e-13!7;UBERON:0000064!1.62e-12!219;UBERON:0000369!3.77e-12!4;UBERON:0002435!3.77e-12!4;UBERON:0000204!3.77e-12!4;UBERON:0010082!3.77e-12!4;UBERON:0002680!1.76e-11!9;UBERON:0001895!1.76e-11!9;UBERON:0010092!1.76e-11!9;UBERON:0000475!4.06e-11!365;UBERON:0006331!1.78e-10!3;UBERON:0000988!2.75e-10!3;UBERON:0002240!3.51e-10!3;UBERON:0001872!3.69e-10!5;UBERON:0002021!4.16e-10!5;UBERON:0001896!4.47e-10!3;UBERON:0005290!4.47e-10!3;UBERON:0010096!4.47e-10!3;UBERON:0002771!7.69e-10!3;UBERON:0005383!1.81e-09!3;UBERON:0005382!1.81e-09!3;UBERON:0000062!1.81e-08!511;UBERON:0005162!8.33e-08!2;UBERON:0000122!8.33e-08!2;UBERON:0001897!1.30e-07!2;UBERON:0001875!1.57e-07!2;UBERON:0006514!1.57e-07!2;UBERON:0002148!2.01e-07!2;UBERON:0009662!2.01e-07!2;UBERON:0001954!4.87e-07!2;UBERON:0003022!4.87e-07!2;UBERON:0002421!4.87e-07!2;UBERON:0002600!4.87e-07!2;UBERON:0001873!6.97e-07!2;UBERON:0010122!6.97e-07!2;UBERON:0001876!7.85e-07!2;UBERON:0001870!8.57e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.33e-75;34!UBERON:0003528;7.50e-73;34!UBERON:0002020;7.50e-73;34!UBERON:0002791;1.20e-70;32!UBERON:0001869;2.33e-70;32!UBERON:0002780;2.37e-63;41!UBERON:0001890;2.37e-63;41!UBERON:0002619;1.09e-60;22!UBERON:0000073;9.17e-58;53!UBERON:0002616;9.17e-58;53!UBERON:0001950;3.37e-53;20!UBERON:0000956;3.72e-53;25!UBERON:0000203;3.72e-53;25!UBERON:0001017;8.68e-40;75!UBERON:0000125;2.97e-37;9!UBERON:0002308;2.97e-37;9!UBERON:0000955;9.73e-37;68!UBERON:0002420;2.04e-36;9!UBERON:0007245;2.04e-36;9!UBERON:0010009;2.04e-36;9!UBERON:0010011;2.04e-36;9!UBERON:0000454;2.04e-36;9!UBERON:0001016;1.39e-30;83!UBERON:0009663;4.07e-29;7!UBERON:0002298;1.10e-25;6!UBERON:0000200;1.61e-24;6!UBERON:0000349;1.87e-20;5!UBERON:0004732;4.18e-20;13!UBERON:0007023;2.48e-19;114!UBERON:0004733;1.29e-16;12!UBERON:0002028;1.29e-16;12!UBERON:0000369;1.39e-16;4!UBERON:0002435;1.39e-16;4!UBERON:0000204;1.39e-16;4!UBERON:0001871;9.60e-15;6!UBERON:0000988;6.75e-14;3!UBERON:0001872;7.13e-14;5!UBERON:0002021;9.48e-14;5!UBERON:0002240;1.06e-13;3!UBERON:0005174;1.06e-13;3!UBERON:0001137;1.06e-13;3!UBERON:0001896;1.50e-13;3!UBERON:0005290;1.50e-13;3!UBERON:0005383;8.92e-13;3!UBERON:0005382;8.92e-13;3!UBERON:0001870;9.11e-13;3!UBERON:0011216;2.67e-12;132!UBERON:0005162;2.18e-10;2!UBERON:0000122;2.18e-10;2!UBERON:0010314;3.23e-10;132!UBERON:0001897;3.91e-10;2!UBERON:0010225;3.91e-10;2!UBERON:0001875;5.09e-10;2!UBERON:0006514;5.09e-10;2!UBERON:0002148;7.24e-10;2!UBERON:0006331;7.24e-10;2!UBERON:0009662;7.24e-10;2!UBERON:0002771;2.08e-09;2!UBERON:0001954;2.41e-09;2!UBERON:0003022;2.41e-09;2!UBERON:0002421;2.41e-09;2!UBERON:0002600;2.41e-09;2!UBERON:0001873;4.17e-09;2!UBERON:0001876;5.03e-09;2!UBERON:0002702;5.03e-09;2!UBERON:0002680;9.17e-08;9!UBERON:0001895;9.17e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.16e-117,56;UBERON:0005068,4.16e-117,56;UBERON:0006241,4.16e-117,56;UBERON:0007135,4.16e-117,56;UBERON:0000073,1.95e-105,53;UBERON:0002616,1.95e-105,53;UBERON:0001017,1.23e-90,81;UBERON:0002780,8.52e-90,41;UBERON:0001890,8.52e-90,41;UBERON:0003080,8.52e-90,41;UBERON:0006240,8.52e-90,41;UBERON:0000955,6.48e-89,68;UBERON:0006238,6.48e-89,68;UBERON:0001893,1.57e-87,34;UBERON:0003528,1.74e-87,34;UBERON:0002020,1.74e-87,34;UBERON:0001016,3.24e-85,89;UBERON:0003075,3.62e-82,82;UBERON:0007284,3.62e-82,82;UBERON:0002791,1.64e-79,32;UBERON:0001869,3.54e-79,32;UBERON:0002346,5.41e-78,86;UBERON:0007023,7.84e-67,114;UBERON:0010371,3.88e-63,104;UBERON:0003056,7.51e-63,61;UBERON:0002619,9.65e-61,22;UBERON:0010314,2.72e-53,132;UBERON:0001950,2.80e-53,20;UBERON:0000956,3.35e-53,25;UBERON:0000203,3.35e-53,25;UBERON:0004121,7.08e-41,171;UBERON:0000924,7.08e-41,171;UBERON:0006601,7.08e-41,171;UBERON:0000125,3.76e-37,9;UBERON:0002308,3.76e-37,9;UBERON:0002420,2.52e-36,9;UBERON:0007245,2.52e-36,9;UBERON:0010009,2.52e-36,9;UBERON:0010011,2.52e-36,9;UBERON:0000454,2.52e-36,9;UBERON:0011216,6.31e-31,223;UBERON:0000025,3.65e-30,192;UBERON:0009663,4.93e-29,7;UBERON:0003076,8.36e-27,15;UBERON:0003057,8.36e-27,15;UBERON:0002298,1.03e-25,6;UBERON:0000200,1.75e-24,6;UBERON:0004111,2.16e-22,240;UBERON:0000349,2.16e-20,5;UBERON:0004732,4.07e-20,13;UBERON:0000483,7.81e-17,306;UBERON:0004733,1.26e-16,12;UBERON:0002028,1.26e-16,12;UBERON:0007277,1.26e-16,12;UBERON:0000119,1.39e-16,309;UBERON:0000369,1.61e-16,4;UBERON:0002435,1.61e-16,4;UBERON:0000204,1.61e-16,4;UBERON:0010082,1.61e-16,4;UBERON:0001871,8.92e-15,6;UBERON:0000988,6.90e-14,3;UBERON:0001872,7.25e-14,5;UBERON:0002021,8.58e-14,5;UBERON:0002240,9.75e-14,3;UBERON:0005174,9.75e-14,3;UBERON:0001137,9.75e-14,3;UBERON:0001896,1.37e-13,3;UBERON:0005290,1.37e-13,3;UBERON:0010096,1.37e-13,3;UBERON:0001870,8.74e-13,3;UBERON:0005383,9.90e-13,3;UBERON:0005382,9.90e-13,3;UBERON:0005162,2.19e-10,2;UBERON:0000122,2.19e-10,2;UBERON:0001897,4.08e-10,2;UBERON:0010225,4.08e-10,2;UBERON:0001875,5.32e-10,2;UBERON:0006514,5.32e-10,2;UBERON:0002148,7.56e-10,2;UBERON:0006331,7.56e-10,2;UBERON:0009662,7.56e-10,2;UBERON:0002771,1.95e-09,2;UBERON:0001954,2.63e-09,2;UBERON:0003022,2.63e-09,2;UBERON:0002421,2.63e-09,2;UBERON:0002600,2.63e-09,2;UBERON:0001873,4.35e-09,2;UBERON:0010122,4.35e-09,2;UBERON:0002702,4.92e-09,2;UBERON:0001876,5.13e-09,2;UBERON:0002680,9.34e-08,9;UBERON:0001895,9.34e-08,9;UBERON:0010092,9.34e-08,9;UBERON:0000923,1.76e-07,560;UBERON:0010316,1.76e-07,560;UBERON:0005291,1.76e-07,560;UBERON:0006598,1.76e-07,560;UBERON:0010317,1.76e-07,560;UBERON:0002532,1.76e-07,560;UBERON:0002050,2.32e-07,564;UBERON:0005423,7.28e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,6.47079315488359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.69332746095218,7.6069840492718,0,0,0,0,0,0,0,0,0,0,5.31444831488303,4.5826646677655,1.52581736317083,0.774054819518572,0.886642856860642,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.375876984865,0,14.7586600806964,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,5.6346608400732,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40588404193705,20.398901454907,0,0,0,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,3.97614844904652,8.17220436669454,0,0,0,0,0,4.49546719269382,0,0,0,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,7.23984555624683,14.1488883864678,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,1.77213635993397,2.68457782784319,6.50992839673799,3.44045517414043,8.98525317448503,10.6184849029766,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.67809053062115,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,6.48715173474241,5.6678630530234,9.09912996625762,4.92279274177812,0,7.95308403338506,7.75083099032885,34.2646608621971,0,0,0,0,0,0,0,0,0,0,0,0,0,7.02390880031304,5.46754669029693,6.82066428453907,9.2587082883104,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,8.42824688912713,7.1034595447877,0,0,0,4.08500533781605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,6.67448788190814,8.31729920915841,9.7210817344182,0,0,0.128915775947154,0,0,0,0,0,0,24.3677291357467,0,8.97487670520074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12086383404657,20.4797331806553,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@GPR62 | |||
}} |
Revision as of 19:06, 21 January 2014
Short description: | p1@GPR62 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPR62_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 60bp_to_ENST00000322241, NM_080865, uc003dca.3_5end |
EntrezGene: | GPR62 |
HGNC: | 13301 |
UniProt: | Q9BZJ7Q8TAM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data