FFCP PHASE1:Hg19::chr22:46373034..46373058,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7477 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12787 | |||
|TSSclassifier=strong | |||
|UniProt=P56706 | |||
|association_with_transcript=-25bp_to_ENST00000339464_5end | |||
|coexpression_cluster_id=C4107 | |||
|description=CAGE_peak_1_at_WNT7B_5end | |||
|id=chr22:46373034..46373058,- | |||
|ontology_enrichment_celltype=CL:0000066!1.50e-43!254;CL:0002076!5.02e-20!43;CL:0000223!5.24e-17!59;CL:0002368!1.19e-10!13;CL:0002251!2.18e-08!21;CL:1000507!3.90e-08!12;CL:1000494!3.90e-08!12;CL:0002202!5.87e-08!9;CL:0002632!5.87e-08!9;CL:1000449!1.30e-07!16;CL:0000082!1.94e-07!19;CL:1000497!2.49e-07!18;CL:0002518!2.49e-07!18;CL:0000076!2.98e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.12e-16;42!CL:0002368;1.58e-14;13!CL:1000507;2.24e-14;10!CL:1000494;2.24e-14;10!CL:0002202;1.06e-10;9!CL:0002632;1.06e-10;9!CL:1000449;1.47e-10;15!CL:1000497;2.69e-10;17!CL:0002518;2.69e-10;17!CL:0000082;1.20e-08;19!CL:0002251;1.63e-07;20!CL:0002681;4.19e-07;12!CL:0002584;4.19e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.26e-50,253;CL:0002076,1.41e-22,42;CL:0000223,1.92e-17,58;CL:0002368,1.55e-14,13;CL:1000507,2.18e-14,10;CL:1000494,2.18e-14,10;CL:0002202,1.07e-10,9;CL:0002632,1.07e-10,9;CL:1000449,1.42e-10,15;CL:1000497,2.61e-10,17;CL:0002518,2.61e-10,17;CL:0000082,1.17e-08,19;CL:0000076,1.19e-08,63;CL:0002251,1.44e-07,20;CL:0002681,4.27e-07,12;CL:0002584,4.27e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.85e-17;29!CL:0000223;2.06e-09;58!UBERON:0006595;1.01e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.82e-37!106;DOID:0050687!9.05e-31!143;DOID:162!1.33e-18!235;DOID:14566!1.91e-17!239;DOID:299!2.16e-14!25;DOID:1749!4.59e-12!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;5.25e-15;14!DOID:299;1.49e-13;25!DOID:305;9.89e-11;106!DOID:0050687;3.49e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.69e-40,106;DOID:0050687,6.40e-32,143;DOID:162,1.66e-21,235;DOID:14566,1.67e-20,239;DOID:1749,5.19e-15,14;DOID:299,9.73e-14,25 | |||
|ontology_enrichment_uberon=UBERON:0000065!1.45e-19!53;UBERON:0004119!4.69e-19!169;UBERON:0000925!4.69e-19!169;UBERON:0006595!4.69e-19!169;UBERON:0008947!7.82e-18!38;UBERON:0003258!7.82e-18!38;UBERON:0001004!3.64e-17!72;UBERON:0001007!1.07e-15!155;UBERON:0001555!1.07e-15!155;UBERON:0007026!1.07e-15!155;UBERON:0000072!2.02e-15!46;UBERON:0005177!4.02e-13!107;UBERON:0000064!5.66e-13!219;UBERON:0000077!1.96e-12!130;UBERON:0000058!6.13e-12!26;UBERON:0004921!7.24e-12!129;UBERON:0004185!7.24e-12!129;UBERON:0005911!8.08e-12!82;UBERON:0001041!3.09e-11!98;UBERON:0005178!4.54e-11!34;UBERON:0002224!4.54e-11!34;UBERON:0001008!7.15e-11!45;UBERON:0000464!8.39e-11!104;UBERON:0005181!1.71e-10!35;UBERON:0006554!2.71e-10!44;UBERON:0000481!1.12e-09!347;UBERON:0000062!1.51e-09!511;UBERON:0003064!1.52e-09!37;UBERON:0000466!2.19e-09!126;UBERON:0009569!3.41e-09!113;UBERON:0000489!4.69e-09!32;UBERON:0002048!5.30e-09!22;UBERON:0000117!5.30e-09!22;UBERON:0000171!5.30e-09!22;UBERON:0000170!5.30e-09!22;UBERON:0005597!5.30e-09!22;UBERON:0000118!5.30e-09!22;UBERON:0005153!1.53e-08!37;UBERON:0000080!2.39e-08!18;UBERON:0002120!2.39e-08!18;UBERON:0004875!2.39e-08!18;UBERON:0005721!2.39e-08!18;UBERON:0005754!2.39e-08!18;UBERON:0007297!2.39e-08!18;UBERON:0001737!3.83e-08!9;UBERON:0009773!3.90e-08!12;UBERON:0001231!3.90e-08!12;UBERON:0004810!3.90e-08!12;UBERON:0006555!4.63e-08!17;UBERON:0005103!4.63e-08!17;UBERON:0000083!4.63e-08!17;UBERON:0009201!4.63e-08!17;UBERON:0004819!4.63e-08!17;UBERON:0006553!4.63e-08!17;UBERON:0003074!4.63e-08!17;UBERON:0003060!4.63e-08!17;UBERON:0004876!6.10e-08!20;UBERON:0002113!6.20e-08!27;UBERON:0003918!6.20e-08!27;UBERON:0005095!6.20e-08!27;UBERON:0007687!6.20e-08!27;UBERON:0000475!1.04e-07!365;UBERON:0004807!1.29e-07!28;UBERON:0004211!1.30e-07!16;UBERON:0001285!1.30e-07!16;UBERON:0007684!1.30e-07!16;UBERON:0003220!1.30e-07!16;UBERON:0004208!1.30e-07!16;UBERON:0007196!1.89e-07!14;UBERON:0001558!1.89e-07!14;UBERON:0004802!1.94e-07!19;UBERON:0000115!1.94e-07!19;UBERON:0001557!2.17e-07!19;UBERON:0000915!2.63e-07!52;UBERON:0000344!3.82e-07!12;UBERON:0002294!9.15e-07!7;UBERON:0001173!9.15e-07!7;UBERON:0004912!9.15e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;1.03e-17;44!UBERON:0000072;4.25e-15;37!UBERON:0004211;2.24e-14;10!UBERON:0009773;2.24e-14;10!UBERON:0001231;2.24e-14;10!UBERON:0004810;2.24e-14;10!UBERON:0004807;1.02e-11;22!UBERON:0005178;1.30e-11;34!UBERON:0002224;1.30e-11;34!UBERON:0001004;3.68e-11;65!UBERON:0006554;5.14e-11;30!UBERON:0001008;5.14e-11;30!UBERON:0001737;5.43e-11;9!UBERON:0001557;5.43e-11;9!UBERON:0005181;7.27e-11;35!UBERON:0002048;8.66e-11;22!UBERON:0000117;8.66e-11;22!UBERON:0000171;8.66e-11;22!UBERON:0000170;8.66e-11;22!UBERON:0006555;1.47e-10;15!UBERON:0004819;1.47e-10;15!UBERON:0001285;1.47e-10;15!UBERON:0007684;1.47e-10;15!UBERON:0005911;4.51e-09;36!UBERON:0004802;1.20e-08;19!UBERON:0000115;1.20e-08;19!UBERON:0007196;3.03e-08;15!UBERON:0001558;3.03e-08;15!UBERON:0000486;1.11e-07;12!UBERON:0000489;1.70e-07;29!UBERON:0002113;2.00e-07;24!UBERON:0011143;2.00e-07;24!UBERON:0002294;2.31e-07;7!UBERON:0001173;2.31e-07;7!UBERON:0000915;2.86e-07;52!UBERON:0001225;4.19e-07;12!UBERON:0008987;4.19e-07;12!UBERON:0005177;6.66e-07;99 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,3.38e-23,54;UBERON:0008947,4.20e-22,38;UBERON:0003258,4.20e-22,38;UBERON:0004119,4.28e-21,160;UBERON:0000925,4.28e-21,160;UBERON:0006595,4.28e-21,160;UBERON:0001004,5.27e-21,74;UBERON:0001007,9.84e-18,145;UBERON:0001555,9.84e-18,145;UBERON:0007026,9.84e-18,145;UBERON:0000072,1.41e-17,47;UBERON:0005177,5.30e-15,101;UBERON:0004810,2.18e-14,10;UBERON:0004921,6.35e-14,118;UBERON:0005178,1.71e-13,34;UBERON:0002224,1.71e-13,34;UBERON:0005181,6.57e-13,35;UBERON:0001041,7.64e-13,87;UBERON:0005153,1.10e-11,37;UBERON:0006555,3.22e-11,16;UBERON:0004819,3.22e-11,16;UBERON:0005911,3.35e-11,82;UBERON:0001008,4.29e-11,48;UBERON:0001737,5.81e-11,9;UBERON:0002048,8.12e-11,22;UBERON:0000117,8.12e-11,22;UBERON:0000171,8.12e-11,22;UBERON:0000170,8.12e-11,22;UBERON:0005597,8.12e-11,22;UBERON:0000118,8.12e-11,22;UBERON:0009569,8.85e-11,112;UBERON:0004211,1.42e-10,15;UBERON:0009773,1.42e-10,15;UBERON:0001231,1.42e-10,15;UBERON:0001285,1.42e-10,15;UBERON:0007684,1.42e-10,15;UBERON:0004208,1.42e-10,15;UBERON:0006554,2.25e-10,47;UBERON:0000915,2.35e-10,52;UBERON:0005157,1.09e-09,47;UBERON:0001557,9.12e-09,19;UBERON:0004802,1.17e-08,19;UBERON:0000115,1.17e-08,19;UBERON:0007196,2.89e-08,15;UBERON:0001558,2.89e-08,15;UBERON:0004807,3.23e-08,28;UBERON:0000489,1.24e-07,31;UBERON:0002113,1.60e-07,26;UBERON:0003918,1.60e-07,26;UBERON:0011143,1.60e-07,26;UBERON:0005095,1.60e-07,26;UBERON:0007687,1.60e-07,26;UBERON:0000161,3.31e-07,36;UBERON:0001225,4.27e-07,12;UBERON:0008987,4.27e-07,12;UBERON:0002100,5.28e-07,199 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,2.7030733015166,13.9560233594486,0,0,0,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.410623275218653,0.87879847716362,0,0,0,0,0,0,8.27479102031034,8.433765725791,12.5716363456708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.665188192387692,0.175669571386252,1.17881167947941,7.28590576585084,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,10.9023513035634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0,0,16.4271725188802,8.18238361772504,10.8985746247821,0.121973706129595,0.132529768321485,0.69716365721711,1.96956004529204,0.252320850875628,0.36497735907583,0,0,0,0,0,8.75470320294845,8.09206512374888,5.06123162755312,6.83822630940842,10.2403338723431,4.74541238222193,8.49437241409036,8.04508007013919,3.8474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0.343135620597051,0.548751427043128,5.62008766288098,2.51322431029077,9.16625607069443,0,0,0,2.89826012437692,0,0,0,0,13.4334747653077,9.4433477830436,0,0,0,12.185398418281,4.03157107677263,0.992425680696705,0,0,1.15014803749563,0,0,0,0,0.12624243342638,0,0,0,3.4214489204541,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00506470303285,9.48434186039732,0,0,0,24.8159787099077,6.31525764256201,48.629685688965,37.9961984098478,8.76078519810868,0,0,0.863663664408557,0,9.48312531403485,19.0642114064844,13.7633187444321,8.31076008928724,37.8348335480481,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0,5.78497203763423,5.38132188622297,2.29702882490251,10.6215669898327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,8.65999014529609,8.04362730642945,2.17781969722645,1.22386941009813,5.59656984472599,0,13.7463347596369,12.4050636111758,0,0,0,0,0,0,0,0,0,0.962479855263359,16.9077749026912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83261613921294,0,0.921722292925374,1.11838053946208,0.834245708559542,0,0,0,0,0,0,8.79560539918633,0,0,0,2.55722532125772,0.23874448473769,0,0,0.994147647766298,0.281338832821026,2.00355669041231,0,0.211125408127993,0.597743964753209,0,0,2.0453736500431,0,0,11.2335438934159,14.3216939740487,0,3.45251919729268,0,0,0.969332746095218,0.0927680981618513,0,3.9064164162785,6.0347399997375,0,21.6207551742449,10.1701460117107,4.96414131712666,2.06846023944879,0,0,0,0.120596438625408,0,0,0,0,2.28770773389879,31.0914949741285,2.6932590476329,0.341826167541004,5.30296980092538,3.14151755434202,0.977826347298073,0,0,0,0,0,0,0,0,0,0,0,8.86191871017714,8.81457164059398,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0,0,8.60924323301195,0,0.789168805698781,1.20990716048664,4.59109142445735,0,0,0.72581733978073,0,0,0,0,0.569219092059585,0,6.42171031839984,14.3068900224991,8.44474303829905,1.7472666824203,1.37588825977293,3.09620260125072,1.60796497589608,1.56019368401098,5.81934098930517,0,1.80784592624426,2.32971271899477,0.19871461170299,0.50648636764703,3.71547627196126,13.4666818022577,8.5381197895741,1.9980960958213,0.288180834308212,0,0,3.02515075775114,1.98804056904692,5.42096279618629,0,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0,0,0,2.99518500748487,0,0,0,0,0,0,0.0824158583811665,0.13480708770837,0.196854963029498,0,0,0.681017030557878,0,0,0.415440338029185,0.2249738915515,5.41661368190565,0.607495566580247,20.126081255956,0.86686278029118,5.24545881349981,0.316801009558219,0,7.10086230081948,0,0,0,0,0,0,1.19730191562487,0.082092520749339,0.511164065356265,0.226624183040251,0,0,0,0,8.21216821844781,5.63852017853338,2.34932307648928,3.30129040709298,2.48543433208317,0,0,0.487170393523584,7.021753835472,0,0,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0.124192805882767,0,6.74894202995376,0,0,10.8222277061159,0,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,2.14441591374926,2.08795433572169,0.226705925512272,6.01958433241968,0,2.32815493405934,9.88164630915111,2.19284049578707,0.530067437837643,1.15748422962549,1.18259708457151,0,2.07258205038719,1.51929978088691,0.138258436151731,0,0,0,0.327609848846413,0.737318726261158,14.3692243883866,0,0.106691729694141,0,1.13503190713367,0,5.0356622779,9.95323616052756,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0.642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0.161475645631851,0,3.33702242903487,29.1385216668919,5.86971515269373,18.1375295856031,0,2.0710797781803,0.397832444232549,0.526472298444801,0,1.56302802246618,6.54766736203556,0.655087670040387,18.1862986046966,0.337687923091973,0,0.413373593002368,0.19024743058172,0.546974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| |||
|short_description=p1@WNT7B | |||
}} |
Revision as of 16:34, 21 January 2014
Short description: | p1@WNT7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WNT7B_5end |
Coexpression cluster: | C4107_Renal_pharyngeal_oral_cervical_tubular_keratoacanthoma_bronchial |
Association with transcript: | -25bp_to_ENST00000339464_5end |
EntrezGene: | WNT7B |
HGNC: | 12787 |
UniProt: | P56706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.26e-50 | 253 |
endo-epithelial cell | 1.41e-22 | 42 |
endodermal cell | 1.92e-17 | 58 |
respiratory epithelial cell | 1.55e-14 | 13 |
kidney tubule cell | 2.18e-14 | 10 |
nephron tubule epithelial cell | 2.18e-14 | 10 |
epithelial cell of tracheobronchial tree | 1.07e-10 | 9 |
epithelial cell of lower respiratory tract | 1.07e-10 | 9 |
epithelial cell of nephron | 1.42e-10 | 15 |
kidney cell | 2.61e-10 | 17 |
kidney epithelial cell | 2.61e-10 | 17 |
epithelial cell of lung | 1.17e-08 | 19 |
squamous epithelial cell | 1.19e-08 | 63 |
epithelial cell of alimentary canal | 1.44e-07 | 20 |
kidney cortical cell | 4.27e-07 | 12 |
renal cortical epithelial cell | 4.27e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.69e-40 | 106 |
cell type cancer | 6.40e-32 | 143 |
cancer | 1.66e-21 | 235 |
disease of cellular proliferation | 1.67e-20 | 239 |
squamous cell carcinoma | 5.19e-15 | 14 |
adenocarcinoma | 9.73e-14 | 25 |