FFCP PHASE1:Hg19::chr2:173600514..173600564,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16626 | |||
|TSSclassifier=strong | |||
|UniProt=E7EVE5,Q8WZA2 | |||
|association_with_transcript=0bp_to_ENST00000264111,NM_007023,uc002uhu.2,uc002uhv.3_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_RAPGEF4_5end | |||
|id=chr2:173600514..173600564,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.98e-17;82!UBERON:0006215;4.59e-09;3!UBERON:0006241;2.71e-08;3!UBERON:0003057;2.71e-08;3!UBERON:0010122;4.29e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.27e-46!57;UBERON:0005068!4.27e-46!57;UBERON:0006241!4.27e-46!57;UBERON:0007135!4.27e-46!57;UBERON:0007023!8.07e-43!115;UBERON:0002780!7.22e-41!41;UBERON:0001890!7.22e-41!41;UBERON:0006240!7.22e-41!41;UBERON:0003080!1.57e-39!42;UBERON:0001017!3.94e-39!82;UBERON:0005743!8.89e-38!86;UBERON:0002616!9.05e-38!59;UBERON:0000073!4.12e-36!94;UBERON:0001016!4.12e-36!94;UBERON:0000955!9.40e-36!69;UBERON:0006238!9.40e-36!69;UBERON:0001893!1.73e-33!34;UBERON:0002020!3.43e-33!34;UBERON:0003528!3.43e-33!34;UBERON:0002346!1.12e-32!90;UBERON:0002791!2.76e-32!33;UBERON:0001869!6.04e-32!32;UBERON:0003075!2.55e-30!86;UBERON:0007284!2.55e-30!86;UBERON:0002619!6.04e-28!22;UBERON:0003056!2.17e-26!61;UBERON:0001950!1.95e-25!20;UBERON:0000956!1.29e-23!25;UBERON:0000203!1.29e-23!25;UBERON:0000153!2.15e-22!129;UBERON:0007811!2.15e-22!129;UBERON:0000033!6.63e-22!123;UBERON:0000924!4.64e-18!173;UBERON:0006601!4.64e-18!173;UBERON:0004121!2.17e-16!169;UBERON:0002420!1.92e-11!9;UBERON:0007245!1.92e-11!9;UBERON:0010009!1.92e-11!9;UBERON:0010011!1.92e-11!9;UBERON:0000454!1.92e-11!9;UBERON:0000025!2.73e-11!194;UBERON:0002308!5.18e-11!9;UBERON:0000125!5.18e-11!9;UBERON:0004111!5.75e-11!241;UBERON:0001871!1.17e-10!7;UBERON:0009663!4.21e-09!7;UBERON:0000200!1.00e-08!6;UBERON:0001894!1.07e-08!7;UBERON:0006222!1.07e-08!7;UBERON:0003076!3.19e-08!15;UBERON:0003057!3.19e-08!15;UBERON:0000477!5.43e-08!286;UBERON:0000349!1.06e-07!5;UBERON:0001872!2.81e-07!5;UBERON:0000064!3.13e-07!219;UBERON:0002021!4.17e-07!5;UBERON:0000483!6.00e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.04e-65;32!UBERON:0002780;4.16e-64;41!UBERON:0001890;4.16e-64;41!UBERON:0001893;1.32e-62;34!UBERON:0003528;5.47e-62;34!UBERON:0002020;5.47e-62;34!UBERON:0002619;1.65e-61;22!UBERON:0002791;4.10e-61;32!UBERON:0001950;9.15e-56;20!UBERON:0000956;1.28e-53;25!UBERON:0000203;1.28e-53;25!UBERON:0000073;4.26e-52;53!UBERON:0002616;4.26e-52;53!UBERON:0001017;4.18e-38;75!UBERON:0000955;6.21e-37;68!UBERON:0001016;1.07e-32;83!UBERON:0002420;2.11e-20;9!UBERON:0007245;2.11e-20;9!UBERON:0010009;2.11e-20;9!UBERON:0010011;2.11e-20;9!UBERON:0000454;2.11e-20;9!UBERON:0001871;1.69e-19;6!UBERON:0000125;2.15e-19;9!UBERON:0002308;2.15e-19;9!UBERON:0001894;8.85e-18;7!UBERON:0000200;8.88e-18;6!UBERON:0000349;1.77e-15;5!UBERON:0009663;3.63e-15;7!UBERON:0001872;2.15e-14;5!UBERON:0007023;3.12e-14;114!UBERON:0002021;4.01e-14;5!UBERON:0011216;3.35e-13;132!UBERON:0000369;8.36e-13;4!UBERON:0002435;8.36e-13;4!UBERON:0000204;8.36e-13;4!UBERON:0002784;6.56e-11;4!UBERON:0003296;2.47e-10;4!UBERON:0010133;2.47e-10;4!UBERON:0002680;3.32e-10;9!UBERON:0001895;3.32e-10;9!UBERON:0005383;5.61e-10;3!UBERON:0005382;5.61e-10;3!UBERON:0004733;6.24e-10;12!UBERON:0002028;6.24e-10;12!UBERON:0001870;1.02e-09;3!UBERON:0004732;4.35e-09;13!UBERON:0010314;1.13e-08;132!UBERON:0000988;2.71e-08;3!UBERON:0002240;2.71e-08;3!UBERON:0005174;2.71e-08;3!UBERON:0001137;2.71e-08;3!UBERON:0001954;2.60e-07;2!UBERON:0003022;2.60e-07;2!UBERON:0002421;2.60e-07;2!UBERON:0002600;2.60e-07;2!UBERON:0002771;3.10e-07;2!UBERON:0001873;4.29e-07;2!UBERON:0001876;5.18e-07;2!UBERON:0002298;5.81e-07;6!UBERON:0002702;6.72e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.59e-103,56;UBERON:0005068,2.59e-103,56;UBERON:0006241,2.59e-103,56;UBERON:0007135,2.59e-103,56;UBERON:0000073,3.87e-96,53;UBERON:0002616,3.87e-96,53;UBERON:0002780,7.35e-90,41;UBERON:0001890,7.35e-90,41;UBERON:0003080,7.35e-90,41;UBERON:0006240,7.35e-90,41;UBERON:0001017,3.54e-87,81;UBERON:0000955,1.26e-82,68;UBERON:0006238,1.26e-82,68;UBERON:0001016,2.32e-80,89;UBERON:0001893,5.70e-73,34;UBERON:0001869,6.68e-73,32;UBERON:0003528,2.71e-72,34;UBERON:0002020,2.71e-72,34;UBERON:0002791,9.48e-68,32;UBERON:0003075,7.01e-67,82;UBERON:0007284,7.01e-67,82;UBERON:0002346,3.28e-63,86;UBERON:0002619,1.20e-61,22;UBERON:0003056,2.46e-57,61;UBERON:0001950,6.68e-56,20;UBERON:0000956,9.72e-54,25;UBERON:0000203,9.72e-54,25;UBERON:0010371,1.75e-52,104;UBERON:0007023,1.01e-43,114;UBERON:0010314,1.47e-42,132;UBERON:0004121,1.90e-37,171;UBERON:0000924,1.90e-37,171;UBERON:0006601,1.90e-37,171;UBERON:0011216,1.32e-30,223;UBERON:0000025,2.21e-26,192;UBERON:0002420,2.17e-20,9;UBERON:0007245,2.17e-20,9;UBERON:0010009,2.17e-20,9;UBERON:0010011,2.17e-20,9;UBERON:0000454,2.17e-20,9;UBERON:0001871,1.67e-19,6;UBERON:0000125,1.71e-19,9;UBERON:0002308,1.71e-19,9;UBERON:0004111,1.67e-18,240;UBERON:0000200,8.65e-18,6;UBERON:0001894,9.99e-18,7;UBERON:0006222,9.99e-18,7;UBERON:0003076,1.06e-15,15;UBERON:0003057,1.06e-15,15;UBERON:0000349,1.80e-15,5;UBERON:0009663,3.68e-15,7;UBERON:0001872,1.61e-14,5;UBERON:0002021,3.91e-14,5;UBERON:0000369,8.38e-13,4;UBERON:0002435,8.38e-13,4;UBERON:0000204,8.38e-13,4;UBERON:0010082,8.38e-13,4;UBERON:0000483,1.66e-12,306;UBERON:0000119,2.92e-12,309;UBERON:0002784,6.48e-11,4;UBERON:0003296,2.74e-10,4;UBERON:0010133,2.74e-10,4;UBERON:0002680,2.85e-10,9;UBERON:0001895,2.85e-10,9;UBERON:0010092,2.85e-10,9;UBERON:0004733,5.20e-10,12;UBERON:0002028,5.20e-10,12;UBERON:0007277,5.20e-10,12;UBERON:0005383,5.62e-10,3;UBERON:0005382,5.62e-10,3;UBERON:0001870,1.03e-09,3;UBERON:0004732,3.68e-09,13;UBERON:0000988,2.14e-08,3;UBERON:0002240,2.20e-08,3;UBERON:0005174,2.20e-08,3;UBERON:0001137,2.20e-08,3;UBERON:0001954,2.60e-07,2;UBERON:0003022,2.60e-07,2;UBERON:0002421,2.60e-07,2;UBERON:0002600,2.60e-07,2;UBERON:0002771,3.11e-07,2;UBERON:0001873,4.29e-07,2;UBERON:0010122,4.29e-07,2;UBERON:0002298,4.71e-07,6;UBERON:0001876,5.26e-07,2;UBERON:0002702,6.63e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.6019245761871,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.573609190778008,0.121973706129595,0.265059536642971,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.288732895522148,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,1.01637849688985,2.60279707715243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.318852545457645,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,11.9297717731956,17.1616688020826,0,0,0,0.19924798825107,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,20.3559876679996,13.1730699389829,11.9768278800717,0,0,0,0.1137934482855,0,0,1.03423011972439,0.874813840149763,0.694499979733169,9.74315524395223,40.1586140622608,6.10326945268333,5.75012151642368,5.31985714116385,16.6732901837019,0,0.41827123283581,0.307801034015188,0,0,0,0,0,0,0,0,0.31396051279005,0.166211681900156,0,0,0,0,0,0,0,0,0.865554558968364,0,0.0884575645033392,0,0,0,0,3.30265551605317,0,6.09087558885882,0,0,0,0,1.20990716048664,1.22429104652196,0.442306057399416,0.751617097072463,0.311064574191741,0,0,0,0,0,0,0,0.195984794828755,0,0.873633341210151,0,0,0,0,0,0.176512253383001,1.12990370390266,0,0,20.2594547058812,0.195551382734803,0,0,0.19980960958213,0.576361668616424,0.114536596165916,2.74551996579143,0,0.124252535565433,0.235694034616795,0,0,0,0,7.80546375322726,9.17266038576353,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0.446342914883745,1.00775208730089,0,0,0,0,0,0,0,18.290282865614,24.7890199123068,0,0.137539436597234,0,0.2249738915515,0.77380195455795,23.6315775399716,0.670869375198532,0.0788057072991982,0,0,1.07572403599707,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,0.439656701034247,0,1.29282956361551,1.45455861916959,0.513260513652988,0,0.213574825135389,0,0,0,0,0,0.638341257770182,3.26410682021684,2.7575888342497,2.14441903734423,2.29510841496863,2.82697373250422,9.74674997963685,20.6224387684318,15.1481026154865,0,0.443716206147409,1.36612086471044,0.276697269872462,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0057876466629,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0,0,1.40683808434017,0,0.157265941855896,0,0.169732529954025,0.425149840203366,0.123935764259002,0.558644917973244,0,0.0788617450012534,4.00285374142735,0,0,21.4525611822175,5.6678630530234,10.8551024158863,14.9734945895751,1.26035848110859,15.0071237847353,15.3401863350259,0,0,0,0.366857197043358,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,15.2634941237572,13.2783276764354,14.0547021620805,16.7417738911914,1.64092442705466,0,0.496211178389294,0.175871244359621,0.127762427639595,1.60710550763486,1.00885116665647,2.42786241694653,1.13831095675649,0.0887023701626388,0,0,3.19457744991109,14.798874051641,0,0.222462803784138,0.078493092850514,25.7669567462243,0.560544326627578,0,0,0,0.500335809236594,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0.935757853848423,1.19370465096821,0.356760272332706,0.5647304101948,0.659643100472575,0.905777061400041,0,0.437119121007915,2.35158648180761,0.245148321753905,3.06379511232114,1.57046773691956,1.18818560130834,3.3812458206672,0,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,17.9497534104015,3.05445483238264,1.0580536810308,0,0,0,0,0,0,0.203977659483963,0,0,0.250707539292375,0,0,6.63335551567024,7.03344371860887,0,0.476128862927481,0.0645889098360061,0.248298857183432,0.112131862580613,0.0636471582781649,0,0.435433495793923,0,0.134704106029175,0.215166616178029,0,0.407016343054873,0.106727345877715,0,0,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p3@RAPGEF4 | |||
}} |
Revision as of 06:37, 21 January 2014
Short description: | p3@RAPGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAPGEF4_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000264111, NM_007023, uc002uhu.2, uc002uhv.3_5end |
EntrezGene: | RAPGEF4 |
HGNC: | 16626 |
UniProt: | E7EVE5Q8WZA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data