FFCP PHASE1:Hg19::chr19:1450112..1450187,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24036 | |||
|TSSclassifier=strong | |||
|UniProt=O95996,B5MDS5 | |||
|association_with_transcript=0bp_to_ENST00000233607,ENST00000238483,NM_005883,uc002lsr.1,uc002lss.1_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_APC2_5end | |||
|id=chr19:1450112..1450187,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.85e-08!25;CL:0000133!8.76e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.07e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.16e-07,8;CL:0002319,6.33e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.50e-19;82!UBERON:0006215;8.76e-08;3!UBERON:0006241;1.13e-07;3!UBERON:0003057;1.13e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.49e-65!94;UBERON:0001016!2.49e-65!94;UBERON:0001017!2.65e-64!82;UBERON:0005743!5.80e-64!86;UBERON:0001049!1.97e-61!57;UBERON:0005068!1.97e-61!57;UBERON:0006241!1.97e-61!57;UBERON:0007135!1.97e-61!57;UBERON:0000955!3.00e-53!69;UBERON:0006238!3.00e-53!69;UBERON:0002616!9.55e-53!59;UBERON:0003075!1.44e-47!86;UBERON:0007284!1.44e-47!86;UBERON:0002780!5.62e-47!41;UBERON:0001890!5.62e-47!41;UBERON:0006240!5.62e-47!41;UBERON:0003080!1.69e-45!42;UBERON:0002346!2.02e-44!90;UBERON:0001893!1.40e-39!34;UBERON:0002020!1.53e-39!34;UBERON:0003528!1.53e-39!34;UBERON:0002791!2.20e-38!33;UBERON:0003056!1.48e-37!61;UBERON:0001869!5.52e-37!32;UBERON:0004121!2.43e-33!169;UBERON:0000924!6.28e-32!173;UBERON:0006601!6.28e-32!173;UBERON:0000033!3.00e-30!123;UBERON:0000153!9.01e-29!129;UBERON:0007811!9.01e-29!129;UBERON:0000956!1.08e-28!25;UBERON:0000203!1.08e-28!25;UBERON:0007023!1.61e-27!115;UBERON:0002619!1.06e-25!22;UBERON:0001950!1.73e-23!20;UBERON:0003076!2.20e-16!15;UBERON:0003057!2.20e-16!15;UBERON:0000025!7.16e-15!194;UBERON:0004732!5.21e-14!13;UBERON:0004733!1.05e-12!12;UBERON:0002028!1.05e-12!12;UBERON:0007277!1.05e-12!12;UBERON:0002308!3.49e-12!9;UBERON:0000125!3.49e-12!9;UBERON:0002420!5.41e-12!9;UBERON:0007245!5.41e-12!9;UBERON:0010009!5.41e-12!9;UBERON:0010011!5.41e-12!9;UBERON:0000454!5.41e-12!9;UBERON:0004111!1.27e-11!241;UBERON:0000475!1.59e-10!365;UBERON:0000483!4.36e-10!309;UBERON:0009663!8.65e-10!7;UBERON:0000119!9.19e-10!312;UBERON:0002680!2.79e-09!9;UBERON:0001895!2.79e-09!9;UBERON:0010092!2.79e-09!9;UBERON:0000064!3.27e-09!219;UBERON:0000477!5.74e-09!286;UBERON:0000922!6.61e-09!612;UBERON:0001894!1.17e-08!7;UBERON:0006222!1.17e-08!7;UBERON:0002298!1.83e-08!8;UBERON:0000200!2.36e-08!6;UBERON:0001871!2.47e-08!7;UBERON:0000468!3.72e-08!659;UBERON:0000467!9.26e-08!625;UBERON:0002021!1.06e-07!5;UBERON:0000480!1.09e-07!626;UBERON:0001872!1.99e-07!5;UBERON:0000062!2.74e-07!511;UBERON:0000349!3.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.93e-54;34!UBERON:0003528;7.95e-54;34!UBERON:0002020;7.95e-54;34!UBERON:0002780;2.41e-53;41!UBERON:0001890;2.41e-53;41!UBERON:0002791;2.68e-53;32!UBERON:0001869;3.47e-53;32!UBERON:0000073;2.49e-52;53!UBERON:0002616;2.49e-52;53!UBERON:0000956;1.19e-45;25!UBERON:0000203;1.19e-45;25!UBERON:0002619;8.21e-41;22!UBERON:0001950;3.09e-37;20!UBERON:0000955;2.50e-36;68!UBERON:0001017;1.27e-33;75!UBERON:0001016;5.69e-32;83!UBERON:0004732;7.64e-19;13!UBERON:0000125;1.30e-18;9!UBERON:0002308;1.30e-18;9!UBERON:0002420;2.63e-18;9!UBERON:0007245;2.63e-18;9!UBERON:0010009;2.63e-18;9!UBERON:0010011;2.63e-18;9!UBERON:0000454;2.63e-18;9!UBERON:0004733;8.53e-17;12!UBERON:0002028;8.53e-17;12!UBERON:0009663;9.07e-15;7!UBERON:0002298;4.89e-13;6!UBERON:0001894;7.30e-13;7!UBERON:0011216;1.27e-12;132!UBERON:0000200;1.73e-12;6!UBERON:0007023;1.07e-11;114!UBERON:0002021;1.95e-11;5!UBERON:0002680;2.01e-11;9!UBERON:0001895;2.01e-11;9!UBERON:0001872;5.26e-11;5!UBERON:0001871;5.33e-11;6!UBERON:0000349;1.29e-10;5!UBERON:0000369;7.47e-09;4!UBERON:0002435;7.47e-09;4!UBERON:0000204;7.47e-09;4!UBERON:0002784;4.06e-08;4!UBERON:0010314;6.34e-08;132!UBERON:0002240;1.13e-07;3!UBERON:0005174;1.13e-07;3!UBERON:0001137;1.13e-07;3!UBERON:0000988;1.98e-07;3!UBERON:0001896;2.90e-07;3!UBERON:0005290;2.90e-07;3!UBERON:0003296;2.93e-07;4!UBERON:0010133;2.93e-07;4!UBERON:0005383;5.94e-07;3!UBERON:0005382;5.94e-07;3!UBERON:0001870;6.00e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.76e-98,56;UBERON:0005068,5.76e-98,56;UBERON:0006241,5.76e-98,56;UBERON:0007135,5.76e-98,56;UBERON:0001016,1.41e-93,89;UBERON:0001017,2.15e-92,81;UBERON:0000073,1.70e-91,53;UBERON:0002616,1.70e-91,53;UBERON:0000955,1.35e-79,68;UBERON:0006238,1.35e-79,68;UBERON:0002780,2.78e-75,41;UBERON:0001890,2.78e-75,41;UBERON:0003080,2.78e-75,41;UBERON:0006240,2.78e-75,41;UBERON:0003075,3.99e-75,82;UBERON:0007284,3.99e-75,82;UBERON:0002346,7.37e-71,86;UBERON:0001893,2.68e-63,34;UBERON:0003528,3.09e-63,34;UBERON:0002020,3.09e-63,34;UBERON:0002791,3.23e-59,32;UBERON:0001869,4.30e-59,32;UBERON:0010371,7.98e-58,104;UBERON:0003056,2.88e-57,61;UBERON:0004121,3.34e-46,171;UBERON:0000924,3.34e-46,171;UBERON:0006601,3.34e-46,171;UBERON:0000956,1.16e-45,25;UBERON:0000203,1.16e-45,25;UBERON:0010314,4.14e-42,132;UBERON:0002619,7.91e-41,22;UBERON:0011216,3.92e-38,223;UBERON:0001950,3.01e-37,20;UBERON:0007023,2.54e-35,114;UBERON:0003076,1.39e-22,15;UBERON:0003057,1.39e-22,15;UBERON:0000025,2.32e-21,192;UBERON:0004732,8.13e-19,13;UBERON:0000125,1.20e-18,9;UBERON:0002308,1.20e-18,9;UBERON:0002420,2.43e-18,9;UBERON:0007245,2.43e-18,9;UBERON:0010009,2.43e-18,9;UBERON:0010011,2.43e-18,9;UBERON:0000454,2.43e-18,9;UBERON:0004733,9.06e-17,12;UBERON:0002028,9.06e-17,12;UBERON:0007277,9.06e-17,12;UBERON:0009663,8.53e-15,7;UBERON:0004111,1.02e-14,240;UBERON:0002298,4.79e-13,6;UBERON:0001894,5.57e-13,7;UBERON:0006222,5.57e-13,7;UBERON:0000200,1.73e-12,6;UBERON:0002021,1.91e-11,5;UBERON:0002680,2.11e-11,9;UBERON:0001895,2.11e-11,9;UBERON:0010092,2.11e-11,9;UBERON:0000483,3.08e-11,306;UBERON:0001872,5.26e-11,5;UBERON:0001871,5.28e-11,6;UBERON:0000119,5.62e-11,309;UBERON:0000349,1.23e-10,5;UBERON:0000922,9.13e-10,592;UBERON:0000369,7.32e-09,4;UBERON:0002435,7.32e-09,4;UBERON:0000204,7.32e-09,4;UBERON:0010082,7.32e-09,4;UBERON:0005423,9.75e-09,581;UBERON:0000923,2.82e-08,560;UBERON:0010316,2.82e-08,560;UBERON:0005291,2.82e-08,560;UBERON:0006598,2.82e-08,560;UBERON:0010317,2.82e-08,560;UBERON:0002532,2.82e-08,560;UBERON:0002784,3.65e-08,4;UBERON:0002050,4.54e-08,564;UBERON:0002240,1.14e-07,3;UBERON:0005174,1.14e-07,3;UBERON:0001137,1.14e-07,3;UBERON:0000988,1.91e-07,3;UBERON:0003296,2.27e-07,4;UBERON:0010133,2.27e-07,4;UBERON:0001896,2.93e-07,3;UBERON:0005290,2.93e-07,3;UBERON:0010096,2.93e-07,3;UBERON:0001870,5.94e-07,3;UBERON:0005383,5.94e-07,3;UBERON:0005382,5.94e-07,3 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984968464614303,0,5.32873026512749,9.15955158819382,5.47497700291537,7.03038781730896,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,6.7454223881322,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0,0.600182192168805,0,0,0,0.168776332241266,0.584622030967192,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0,0.731842236777572,1.98794652482228,0.813357600086629,1.86589899027667,0.252320850875628,1.09493207722749,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.651616610620649,0,0,2.08674728955138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1226108042442,36.4391590801341,52.5836392688833,69.184217583086,52.3109776355594,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0.664225598535437,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.48335359146061,0,0,0,0,0,0,0.712256285173899,0,0,0,0,0,1.5740617341532,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.989838023675989,0,0,0,0,0,0,0,0,0,0,0.785992328104969,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,4.16613877397145,20.2120769605305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,18.8888053075597,32.2132963580074,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,40.7119753359992,33.674819632752,169.671728301015,0,0,0,0,0,0,0,0,13.7163745997301,24.8007588027875,25.6870414272119,38.1454340792708,40.361429874897,51.4252856979173,14.6988216093162,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,5.63390144493182,4.3247378631276,3.02823653565821,46.2371772247444,0,40.5277491104837,0,0,0,0.394584402849391,0,112.022630756759,0.442306057399416,0.450970258243478,0,0,0,0,0,0,8.87517907284087,0,0,0,0.17472666824203,0,0,0,0,0,17.2099447048425,5.87549926029384,0,0,27.9833718124984,0,0,0,0,0,1.14536596165916,0,0,0,0,0,0,0,0,36.6256376112972,38.744222226434,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,21.4712016248512,26.968274410092,0,0.825236619583403,0,0,0,35.1739933049963,0,0,0,0,0,0,0,0,4.068296602476,0,0,0,0,0,0,0,0,0,31.2864754394952,38.7441523106082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3795681392407,19.2801498545102,27.6671956861365,21.2161402405326,29.8399148634133,43.7779640736753,0.415045904808692,0.124980407962107,0.151649117541648,0,0,0,4.34763085832475,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.1081481341394,0,0.132864840313363,0.163565394255844,0,0,0,0.39997479170986,0,0,0,0.184105950251841,0,0,21.8699374929244,15.2032984069321,0,18.5656384926424,0,0,0,0,0,0,0.80057074828547,1.41070377476274,0.3062454773532,32.564217123905,21.2544864488377,40.8662679186307,28.5111746294649,113.180191603551,41.2177224686739,32.1336534807384,105.649370991774,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7296010013696,14.8404838736631,29.142838306667,29.6785991707484,91.3447931060427,0,0,0,0,1.60710550763486,2.35398605553177,1.82089681270989,1.59363533945908,0,0,0,33.916896755439,35.6488432710642,0,0,0.078493092850514,24.9813787966443,0,10.9579046461139,0,0,2.57315559035963,1.10609528212909,0.464965701472501,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,3.9769708788558,18.1045205396845,2.2594817247738,0,0,1.20770274853339,0,1.09279780251979,0,0,0.707029641304878,30.6241208699315,46.0421920506983,46.9147857617574,0,0,0.322289439867886,0,0,0,0,0,0,38.2716687014375,0.788857810965923,46.9141282317311,122.178193295306,0.5290268405154,0,0,0,0.126166424835079,0,0,0.101988829741982,1.60330443159336,0,0,0.227336094654718,0,19.9000665470107,36.6152805351109,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@APC2 | |||
}} |
Revision as of 20:16, 20 January 2014
Short description: | p1@APC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APC2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000233607, ENST00000238483, NM_005883, uc002lsr.1, uc002lss.1_5end |
EntrezGene: | APC2 |
HGNC: | 24036 |
UniProt: | O95996B5MDS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.16e-07 | 8 |
neural cell | 6.33e-07 | 25 |