FFCP PHASE1:Hg19::chr18:77104123..77104150,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374868 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13541 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-114bp_to_uc002lna.2_5end | |||
|description=CAGE_peak_5_at_ATP9B_5end | |||
|id=chr18:77104123..77104150,+ | |||
|ontology_enrichment_celltype=CL:1000497!5.23e-16!18;CL:0002518!5.23e-16!18;CL:1000449!1.28e-14!16;CL:1000507!3.06e-12!12;CL:1000494!3.06e-12!12;CL:0002681!2.28e-11!13;CL:0002584!2.28e-11!13;CL:0000239!6.62e-11!3;CL:1000615!6.62e-11!3;CL:0002306!6.62e-11!3;CL:0000066!3.82e-10!254 | |||
|ontology_enrichment_celltype_v019=CL:0000239;1.17e-26;3!CL:1000615;1.17e-26;3!CL:0002306;1.17e-26;3!CL:1000497;5.35e-18;17!CL:0002518;5.35e-18;17!CL:0002681;6.43e-18;12!CL:0002584;6.43e-18;12!CL:1000449;2.56e-14;15!CL:1000507;4.70e-14;10!CL:1000494;4.70e-14;10!CL:0000244;8.82e-10;4!CL:0000731;8.82e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-26,3;CL:1000615,1.22e-26,3;CL:0002306,1.22e-26,3;CL:1000497,5.52e-18,17;CL:0002518,5.52e-18,17;CL:0002681,6.67e-18,12;CL:0002584,6.67e-18,12;CL:1000449,2.64e-14,15;CL:1000507,4.62e-14,10;CL:1000494,4.62e-14,10;CL:0000244,7.57e-10,4;CL:0000731,7.57e-10,4;CL:0000066,2.46e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:299!5.17e-16!25;DOID:305!2.92e-12!106;DOID:0050687!3.12e-10!143;DOID:4929!1.46e-07!2;DOID:3493!2.52e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:299;1.60e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:299,1.64e-08,25;DOID:305,3.34e-08,106;DOID:0050687,4.21e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0006554!1.43e-16!44;UBERON:0001008!4.16e-16!45;UBERON:0000058!2.24e-15!26;UBERON:0004921!7.04e-15!129;UBERON:0004185!7.04e-15!129;UBERON:0004211!1.28e-14!16;UBERON:0001285!1.28e-14!16;UBERON:0007684!1.28e-14!16;UBERON:0003220!1.28e-14!16;UBERON:0004208!1.28e-14!16;UBERON:0002113!3.83e-14!27;UBERON:0003918!3.83e-14!27;UBERON:0005095!3.83e-14!27;UBERON:0007687!3.83e-14!27;UBERON:0006555!1.19e-13!17;UBERON:0005103!1.19e-13!17;UBERON:0000083!1.19e-13!17;UBERON:0009201!1.19e-13!17;UBERON:0004819!1.19e-13!17;UBERON:0006553!1.19e-13!17;UBERON:0003074!1.19e-13!17;UBERON:0003060!1.19e-13!17;UBERON:0000489!1.62e-13!32;UBERON:0004119!1.79e-13!169;UBERON:0000925!1.79e-13!169;UBERON:0006595!1.79e-13!169;UBERON:0001007!4.19e-13!155;UBERON:0001555!4.19e-13!155;UBERON:0007026!4.19e-13!155;UBERON:0003887!4.66e-13!21;UBERON:0000080!8.55e-13!18;UBERON:0002120!8.55e-13!18;UBERON:0004875!8.55e-13!18;UBERON:0005721!8.55e-13!18;UBERON:0005754!8.55e-13!18;UBERON:0007297!8.55e-13!18;UBERON:0009773!3.06e-12!12;UBERON:0001231!3.06e-12!12;UBERON:0004810!3.06e-12!12;UBERON:0005409!1.41e-11!35;UBERON:0005177!1.45e-11!107;UBERON:0001225!2.28e-11!13;UBERON:0008987!2.28e-11!13;UBERON:0004876!2.45e-11!20;UBERON:0000466!4.40e-11!126;UBERON:0006853!6.62e-11!3;UBERON:0007685!6.62e-11!3;UBERON:0004134!6.62e-11!3;UBERON:0005172!1.25e-10!55;UBERON:0005173!1.25e-10!55;UBERON:0000077!1.75e-10!130;UBERON:0003104!3.40e-10!238;UBERON:0009142!3.40e-10!238;UBERON:0003064!1.07e-09!37;UBERON:0005911!2.92e-09!82;UBERON:0002417!3.22e-09!61;UBERON:0000916!3.22e-09!61;UBERON:0000481!4.55e-09!347;UBERON:0001851!4.98e-09!16;UBERON:0000464!9.31e-09!104;UBERON:0009569!1.27e-08!113;UBERON:0000353!1.96e-08!17;UBERON:0002394!2.45e-08!4;UBERON:0003928!2.45e-08!4;UBERON:0002294!7.38e-08!7;UBERON:0001173!7.38e-08!7;UBERON:0004912!7.38e-08!7;UBERON:0001041!9.47e-08!98;UBERON:0000160!2.53e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;1.17e-26;3!UBERON:0007685;1.17e-26;3!UBERON:0004134;1.17e-26;3!UBERON:0002394;2.09e-20;4!UBERON:0003928;2.09e-20;4!UBERON:0001225;6.43e-18;12!UBERON:0008987;6.43e-18;12!UBERON:0006554;1.38e-17;30!UBERON:0001008;1.38e-17;30!UBERON:0001851;2.56e-14;15!UBERON:0006555;2.56e-14;15!UBERON:0000353;2.56e-14;15!UBERON:0004819;2.56e-14;15!UBERON:0001285;2.56e-14;15!UBERON:0007684;2.56e-14;15!UBERON:0004211;4.70e-14;10!UBERON:0009773;4.70e-14;10!UBERON:0001231;4.70e-14;10!UBERON:0004810;4.70e-14;10!UBERON:0002113;1.26e-12;24!UBERON:0011143;1.26e-12;24!UBERON:0002294;6.51e-12;7!UBERON:0001173;6.51e-12;7!UBERON:0000489;2.26e-10;29!UBERON:0004913;8.24e-10;1!UBERON:0003703;8.24e-10;1!UBERON:0001174;8.24e-10;1!UBERON:0004914;8.24e-10;1!UBERON:0000058;1.72e-08;10!UBERON:0000365;5.40e-08;5!UBERON:0000945;1.06e-07;5!UBERON:0010039;1.06e-07;5!UBERON:0005910;8.51e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,1.22e-26,3;UBERON:0007685,1.22e-26,3;UBERON:0004134,1.22e-26,3;UBERON:0001225,6.67e-18,12;UBERON:0008987,6.67e-18,12;UBERON:0001851,2.64e-14,15;UBERON:0004211,2.64e-14,15;UBERON:0009773,2.64e-14,15;UBERON:0000353,2.64e-14,15;UBERON:0001231,2.64e-14,15;UBERON:0001285,2.64e-14,15;UBERON:0007684,2.64e-14,15;UBERON:0004208,2.64e-14,15;UBERON:0004810,4.62e-14,10;UBERON:0002394,9.09e-14,6;UBERON:0003928,9.09e-14,6;UBERON:0006554,9.80e-14,47;UBERON:0001008,2.01e-13,48;UBERON:0006555,2.10e-13,16;UBERON:0004819,2.10e-13,16;UBERON:0002113,1.30e-11,26;UBERON:0003918,1.30e-11,26;UBERON:0011143,1.30e-11,26;UBERON:0005095,1.30e-11,26;UBERON:0007687,1.30e-11,26;UBERON:0004913,8.99e-10,1;UBERON:0003703,8.99e-10,1;UBERON:0001174,8.99e-10,1;UBERON:0004914,8.99e-10,1;UBERON:0000489,1.15e-09,31;UBERON:0002294,2.35e-09,9;UBERON:0001173,2.35e-09,9;UBERON:0004912,2.35e-09,9;UBERON:0000365,4.78e-08,5;UBERON:0000058,1.42e-07,19;UBERON:0005172,3.84e-07,54;UBERON:0005173,3.84e-07,54;UBERON:0005910,7.69e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,1.35359883872224,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,3.56826782263054,2.49322802678617,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,2.58303223602738,0,3.99087138183008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4741189093918,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,3.14539229015644,10.9202916552122,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12202650606892,0.848118428603645,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0.561111741760736,0,0,1.72908500584927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06697711180972,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4628181382501,0.704815022316672,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.63731340893483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,1.19349733269765,0,0,0,0,0,1.18284868973636,0,0,0,0,0,0,0,1.05522746615772,0.638812138197976,0,0,0,0,0,0,0,0,0,1.89110145414349,0,0,0,0.280272163313789,0,4.10262423315381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0.111855431797792,0.392600934460972,1.09726132484042,0,0,0,0,0,0,0,0.11294608203896,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,1.46067277649303,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0.988077223172456,0,0,0.406896178315738,0,0,0 | |||
|short_description=p5@ATP9B | |||
}} |
Revision as of 20:01, 20 January 2014
Short description: | p5@ATP9B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ATP9B_5end |
Coexpression cluster: | NA |
Association with transcript: | -114bp_to_uc002lna.2_5end |
EntrezGene: | ATP9B |
HGNC: | 13541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.22e-26 | 3 |
kidney cortex tubule cell | 1.22e-26 | 3 |
epithelial cell of proximal tubule | 1.22e-26 | 3 |
kidney cell | 5.52e-18 | 17 |
kidney epithelial cell | 5.52e-18 | 17 |
kidney cortical cell | 6.67e-18 | 12 |
renal cortical epithelial cell | 6.67e-18 | 12 |
epithelial cell of nephron | 2.64e-14 | 15 |
kidney tubule cell | 4.62e-14 | 10 |
nephron tubule epithelial cell | 4.62e-14 | 10 |
transitional epithelial cell | 7.57e-10 | 4 |
urothelial cell | 7.57e-10 | 4 |
epithelial cell | 2.46e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 1.64e-08 | 25 |
carcinoma | 3.34e-08 | 106 |
cell type cancer | 4.21e-08 | 143 |