FFCP PHASE1:Hg19::chr17:41167808..41167833,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:41167808..41167833,+ | |||
|id=chr17:41167808..41167833,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.62e-16!248;CL:0000220!3.46e-16!246;CL:0000055!5.30e-15!180;CL:0000222!6.90e-14!119;CL:0000144!3.87e-12!625;CL:0000548!7.06e-12!679;CL:0000004!7.06e-12!679;CL:0000255!7.06e-12!679;CL:0000012!1.81e-11!682;CL:0002371!4.26e-09!591;CL:0000710!1.81e-08!20;CL:0000213!3.52e-08!57;CL:0000215!3.52e-08!57;CL:0000183!4.11e-08!59;CL:0000075!5.25e-08!27;CL:0000066!2.87e-07!254;CL:0000680!5.56e-07!57;CL:0000056!5.56e-07!57;CL:0000355!5.56e-07!57;CL:0002078!8.69e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002570;2.41e-11;8!CL:1000746;3.30e-09;7!CL:1000612;3.30e-09;7!CL:1000449;9.31e-09;15!CL:0002539;3.92e-08;10!CL:0002681;8.55e-08;12!CL:0002584;8.55e-08;12!CL:0000147;1.46e-07;14!CL:0000710;1.77e-07;20!CL:1000497;2.02e-07;17!CL:0002518;2.02e-07;17!CL:0000148;2.21e-07;10!CL:0002188;2.41e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,7.63e-12,8;CL:0000222,2.02e-10,121;CL:1000746,3.44e-09,7;CL:1000612,3.44e-09,7;CL:1000449,1.27e-08,15;CL:0002539,8.54e-08,10;CL:0002681,1.05e-07,12;CL:0002584,1.05e-07,12;CL:0000213,1.06e-07,58;CL:0000215,1.06e-07,58;CL:0000147,1.29e-07,14;CL:1000497,2.63e-07,17;CL:0002518,2.63e-07,17;CL:0000148,2.76e-07,10;CL:0000541,2.76e-07,10;CL:0000710,3.02e-07,20;CL:0002321,4.27e-07,250;CL:0002188,4.58e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000947!2.44e-07!21;UBERON:0010191!2.44e-07!21;UBERON:0000486!3.76e-07!82;UBERON:0005256!4.04e-07!143;UBERON:0002049!4.61e-07!79;UBERON:0007798!4.61e-07!79;UBERON:0004290!9.88e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000074;3.30e-09;7!UBERON:0001229;3.30e-09;7!UBERON:0006555;9.31e-09;15!UBERON:0004819;9.31e-09;15!UBERON:0001285;9.31e-09;15!UBERON:0007684;9.31e-09;15!UBERON:0004237;3.92e-08;10!UBERON:0004695;3.92e-08;10!UBERON:0002111;3.92e-08;10!UBERON:0004178;3.92e-08;10!UBERON:0001225;8.55e-08;12!UBERON:0008987;8.55e-08;12!UBERON:0000353;3.23e-07;15!UBERON:0001013;4.23e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,3.44e-09,7;UBERON:0000074,3.44e-09,7;UBERON:0001229,3.44e-09,7;UBERON:0001230,3.44e-09,7;UBERON:0003220,3.44e-09,7;UBERON:0005749,3.44e-09,7;UBERON:0004199,3.44e-09,7;UBERON:0004209,3.44e-09,7;UBERON:0004198,3.44e-09,7;UBERON:0004211,1.27e-08,15;UBERON:0009773,1.27e-08,15;UBERON:0001231,1.27e-08,15;UBERON:0001285,1.27e-08,15;UBERON:0007684,1.27e-08,15;UBERON:0004208,1.27e-08,15;UBERON:0007503,3.03e-08,78;UBERON:0006555,6.38e-08,16;UBERON:0004819,6.38e-08,16;UBERON:0005103,7.13e-08,8;UBERON:0000083,7.13e-08,8;UBERON:0009201,7.13e-08,8;UBERON:0006553,7.13e-08,8;UBERON:0003074,7.13e-08,8;UBERON:0003060,7.13e-08,8;UBERON:0004237,8.54e-08,10;UBERON:0004695,8.54e-08,10;UBERON:0002111,8.54e-08,10;UBERON:0004178,8.54e-08,10;UBERON:0001225,1.05e-07,12;UBERON:0008987,1.05e-07,12;UBERON:0001013,2.03e-07,14;UBERON:0004876,3.24e-07,11;UBERON:0000353,3.63e-07,15;UBERON:0000080,7.48e-07,9;UBERON:0002120,7.48e-07,9;UBERON:0004875,7.48e-07,9;UBERON:0005721,7.48e-07,9;UBERON:0005754,7.48e-07,9;UBERON:0007297,7.48e-07,9 | |||
|phase1_expression=1.63510541343501,0.214100523890983,0.140954404095971,0,0.893922188854576,0,0,0,0,0.737201809504527,4.18680700783456,0.218441372130172,0.791300934685361,1.36142988256051,1.32558950291166,1.34465029290355,1.20538905604795,4.38186054232424,3.41552959153355,0.246242116153576,0.408001382488506,0.313454721478088,0.572471974262113,0.547497700291537,0.251085279189606,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0.369754010166788,0.0774672005803016,0,0,0,0.401088894940283,0,0.895661896959697,0.647787332037959,0.257575567634187,0.145398238779565,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0,0.541607727530031,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,1.40648818027883,2.89151321907653,0,2.31754430337318,0,0.486634870302636,1.03988298880475,0.886917589850256,0.702678285545008,0.130979075497713,0.364295288292542,0,0.324547393654683,0.522389211897802,0.930705723632056,0,0,0,0,0.860234595106124,0.347140501607594,0.56530794192401,4.61449379830897,4.67700671298115,0.208994966536811,1.8089173141853,0.35576626268671,0,2.01414658554573,0.760272105718513,3.1728067481262,0.735326160691737,2.43042584364528,0.446498641420399,0.44905874525234,0.563057402416611,0,0,0.549605231791222,0,0,0,1.49091585508596,0.886413581652058,1.05927344650575,0.860509862246441,2.4826786753885,1.12135520028461,0,1.97334038733728,0.622422070799533,0.269421344139376,0.490385709340376,0.302714855289863,0,0.70296429550139,2.18512053781224,0.570471821544449,1.19558944441441,0.117434498643765,0.161872944368132,0.421352420106746,0,0,0.309977343527296,0,0.247266929278557,0,1.43723628363248,0.841680569770331,0.625592599359821,0,0,0.612975591598039,0.45071417671979,1.02088964844019,0.358779271377724,0.427114777637135,1.69545520927649,1.20036438433761,0.103052529238439,0.515281080091258,0.558350568994769,0.506328996723799,1.16924406193438,1.51460264546469,0.644349290496095,0.80823028409406,0.355009592516614,0.403008392910561,0.508681776931463,0.773043412653187,0.272746120590835,0.860413786167011,0.975789649036763,0.397589304964456,0.929551542956147,0.932949495138334,0.756962552626885,0,0,0.643240938192885,1.38134921352481,0.464367928031979,5.0531563716871,0.473227200159376,0.674338760312407,0.964044119533928,0.882351781859152,0.217879444092406,0.474541238222193,0.808987848960987,0.784885860501384,0.769494313892781,1.4763109092493,0,0.4115740113314,0,0,0,0,0,0.122988438543114,1.3725424823882,1.42675371031213,0,0.502644862058154,0.555530670951178,0.651616610620649,0,0,0.927443239800615,0.587043471179108,0.866198686566443,1.85194205030644,1.14152491340759,0,0,0.984868024349589,0.468008530278475,0.594524649154913,0,0.503946384596579,0.567100388969546,0.179117045405697,0.290633938513962,0.383382679165211,0,0.176096868026452,0.207328115540772,0.144119953416961,0.50496973370552,4.19086102328316,5.34783795781589,1.17217447210047,3.4214489204541,3.90744472272629,2.40274446275134,5.14487578735041,0.112131084345361,0,0.7333828582095,0.517086863031111,14.3062578340753,2.535908257668,1.06375246633948,2.08014873822732,1.54324424557285,1.41849132023278,0,0.285955987316295,1.08524321078289,0,2.60588947434988,1.06617584622764,0,1.80863626235752,0,0.699810938274399,4.86495122564762,1.00451418286425,2.10833939483032,1.91699884393266,3.44585807502342,0,1.30303176000821,1.2328579353023,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.49076596687656,1.50051156317903,0.542530047399471,2.07970861530807,2.3195768543631,3.46945313074656,0.819989904948992,0,0,1.03473071292505,1.32845119707087,0.368738337083406,1.99832313276591,1.56640925970192,0.686286847621712,0,0.215714200818617,0,0.606255142892519,1.66435439510497,0.907170879989041,1.48864684691266,0.61384789315225,0.841980283299221,0.896974044789907,0.511707249066704,0.965123526861645,1.48418066444991,0.771048469013278,1.59805552781814,1.56041596426237,2.07701771673448,1.16210378459959,0.362578348774867,0.200506470303285,0.368323955743585,1.49258782613989,0.910455840033585,1.04899531967539,0.451199612907412,1.61732207919271,1.56869953835371,0,1.05551628892876,1.13733384070897,1.53084334748864,1.0795795805107,4.62681758070868,1.62567862526312,1.50506932156456,1.01950509218015,0,0.671624264166535,0,0.261435451024901,1.79515087581472,0,0.325378394664303,0,0.0915694648183434,0.247528499761764,0,0,3.21367859688319,1.25671933779759,0.616194468458578,0.460511024178389,0.827019434907183,0.644521469209642,1.0151168573996,0.511359764496605,0.979352392114111,0.495854746082934,0.768760269460425,0.127612712494584,0.2023155617111,4.64845549297286,0.62962469366128,1.3940745403212,1.23213432070436,1.06461206063404,0.869932992075073,0,0,0.372158369359667,0.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| |||
|short_description=p@chr17:41167808..41167833,+ | |||
}} |
Revision as of 15:32, 20 January 2014
Short description: | p@chr17:41167808..41167833, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41167808..41167833, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 7.63e-12 | 8 |
mesodermal cell | 2.02e-10 | 121 |
glomerular cell | 3.44e-09 | 7 |
kidney corpuscule cell | 3.44e-09 | 7 |
epithelial cell of nephron | 1.27e-08 | 15 |
aortic smooth muscle cell | 8.54e-08 | 10 |
kidney cortical cell | 1.05e-07 | 12 |
renal cortical epithelial cell | 1.05e-07 | 12 |
lining cell | 1.06e-07 | 58 |
barrier cell | 1.06e-07 | 58 |
pigment cell | 1.29e-07 | 14 |
kidney cell | 2.63e-07 | 17 |
kidney epithelial cell | 2.63e-07 | 17 |
melanocyte | 2.76e-07 | 10 |
melanoblast | 2.76e-07 | 10 |
neurecto-epithelial cell | 3.02e-07 | 20 |
embryonic cell | 4.27e-07 | 250 |
glomerular endothelial cell | 4.58e-07 | 5 |