FFCP PHASE1:Hg19::chr17:4402161..4402191,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124976 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26992 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVW8 | |||
|association_with_transcript=32bp_to_ENST00000329078,NM_001124758,uc002fxx.2_5end | |||
|coexpression_cluster_id=C3643 | |||
|description=CAGE_peak_1_at_SPNS2_5end | |||
|id=chr17:4402161..4402191,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.22e-12!24;CL:1000497!8.18e-11!18;CL:0002518!8.18e-11!18;CL:0000115!9.28e-11!35;CL:0002078!9.37e-11!44;CL:1000449!6.74e-10!16;CL:0000071!5.38e-08!18;CL:0002546!5.38e-08!18;CL:0002681!8.30e-08!13;CL:0002584!8.30e-08!13;CL:1000507!9.44e-08!12;CL:1000494!9.44e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;1.98e-14;17!CL:0002518;1.98e-14;17!CL:0002139;4.95e-14;24!CL:1000449;2.55e-13;15!CL:0000115;4.46e-12;36!CL:0002681;1.03e-10;12!CL:0002584;1.03e-10;12!CL:1000507;4.91e-10;10!CL:1000494;4.91e-10;10!CL:0000071;2.21e-09;18!CL:0002078;4.87e-09;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.64e-14,36;CL:1000497,2.14e-14,17;CL:0002518,2.14e-14,17;CL:0002139,4.43e-14,24;CL:0002078,1.86e-13,45;CL:1000449,2.62e-13,15;CL:0002681,1.05e-10,12;CL:0002584,1.05e-10,12;CL:1000507,5.01e-10,10;CL:1000494,5.01e-10,10;CL:0000071,2.01e-09,18;CL:0002546,2.01e-09,18;CL:0000213,2.55e-07,58;CL:0000215,2.55e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;2.21e-09;18!UBERON:0006601;2.01e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.78e-40!115;UBERON:0005743!4.34e-21!86;UBERON:0001049!4.57e-21!57;UBERON:0005068!4.57e-21!57;UBERON:0006241!4.57e-21!57;UBERON:0007135!4.57e-21!57;UBERON:0004111!4.12e-20!241;UBERON:0001017!8.52e-19!82;UBERON:0000073!4.26e-18!94;UBERON:0001016!4.26e-18!94;UBERON:0003080!4.50e-17!42;UBERON:0002780!6.23e-17!41;UBERON:0001890!6.23e-17!41;UBERON:0006240!6.23e-17!41;UBERON:0003075!6.57e-17!86;UBERON:0007284!6.57e-17!86;UBERON:0000025!6.80e-17!194;UBERON:0002616!8.99e-17!59;UBERON:0000955!5.18e-16!69;UBERON:0006238!5.18e-16!69;UBERON:0001893!1.72e-15!34;UBERON:0002346!1.97e-15!90;UBERON:0002020!2.75e-15!34;UBERON:0003528!2.75e-15!34;UBERON:0002791!6.12e-15!33;UBERON:0000477!2.21e-14!286;UBERON:0001869!3.34e-14!32;UBERON:0003056!1.99e-13!61;UBERON:0000153!1.66e-12!129;UBERON:0007811!1.66e-12!129;UBERON:0000033!2.24e-12!123;UBERON:0002619!3.00e-12!22;UBERON:0000489!3.05e-12!32;UBERON:0002113!1.37e-11!27;UBERON:0003918!1.37e-11!27;UBERON:0005095!1.37e-11!27;UBERON:0007687!1.37e-11!27;UBERON:0001950!2.25e-11!20;UBERON:0004121!6.52e-11!169;UBERON:0000956!1.08e-10!25;UBERON:0000203!1.08e-10!25;UBERON:0000924!3.21e-10!173;UBERON:0006601!3.21e-10!173;UBERON:0000080!4.06e-10!18;UBERON:0002120!4.06e-10!18;UBERON:0004875!4.06e-10!18;UBERON:0005721!4.06e-10!18;UBERON:0005754!4.06e-10!18;UBERON:0007297!4.06e-10!18;UBERON:0006555!4.30e-10!17;UBERON:0005103!4.30e-10!17;UBERON:0000083!4.30e-10!17;UBERON:0009201!4.30e-10!17;UBERON:0004819!4.30e-10!17;UBERON:0006553!4.30e-10!17;UBERON:0003074!4.30e-10!17;UBERON:0003060!4.30e-10!17;UBERON:0000064!5.16e-10!219;UBERON:0004211!6.74e-10!16;UBERON:0001285!6.74e-10!16;UBERON:0007684!6.74e-10!16;UBERON:0003220!6.74e-10!16;UBERON:0004208!6.74e-10!16;UBERON:0003887!7.44e-10!21;UBERON:0004876!1.72e-09!20;UBERON:0005172!1.25e-08!55;UBERON:0005173!1.25e-08!55;UBERON:0000483!1.54e-08!309;UBERON:0001008!4.69e-08!45;UBERON:0001986!5.38e-08!18;UBERON:0004638!5.38e-08!18;UBERON:0004852!5.38e-08!18;UBERON:0000119!5.44e-08!312;UBERON:0001225!8.30e-08!13;UBERON:0008987!8.30e-08!13;UBERON:0009773!9.44e-08!12;UBERON:0001231!9.44e-08!12;UBERON:0004810!9.44e-08!12;UBERON:0006554!1.03e-07!44;UBERON:0000058!1.88e-07!26;UBERON:0000353!4.47e-07!17;UBERON:0003103!5.00e-07!69;UBERON:0005177!8.85e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.71e-15;34!UBERON:0003528;1.07e-14;34!UBERON:0002020;1.07e-14;34!UBERON:0002619;1.26e-14;22!UBERON:0002791;1.54e-14;32!UBERON:0002780;1.62e-14;41!UBERON:0001890;1.62e-14;41!UBERON:0001869;1.80e-14;32!UBERON:0001950;1.44e-13;20!UBERON:0006555;2.55e-13;15!UBERON:0004819;2.55e-13;15!UBERON:0001285;2.55e-13;15!UBERON:0007684;2.55e-13;15!UBERON:0000489;5.54e-13;29!UBERON:0000073;8.40e-13;53!UBERON:0002616;8.40e-13;53!UBERON:0007023;2.37e-12;114!UBERON:0002113;6.17e-12;24!UBERON:0011143;6.17e-12;24!UBERON:0000956;7.81e-12;25!UBERON:0000203;7.81e-12;25!UBERON:0000353;4.82e-11;15!UBERON:0001225;1.03e-10;12!UBERON:0008987;1.03e-10;12!UBERON:0004211;4.91e-10;10!UBERON:0009773;4.91e-10;10!UBERON:0001231;4.91e-10;10!UBERON:0004810;4.91e-10;10!UBERON:0004638;2.21e-09;18!UBERON:0001986;2.21e-09;18!UBERON:0004852;2.21e-09;18!UBERON:0006554;1.05e-08;30!UBERON:0001008;1.05e-08;30!UBERON:0000955;1.47e-08;68!UBERON:0001017;2.87e-08;75!UBERON:0001851;1.50e-07;15!UBERON:0001016;2.02e-07;83!UBERON:0000487;2.56e-07;22!UBERON:0002420;2.93e-07;9!UBERON:0007245;2.93e-07;9!UBERON:0010009;2.93e-07;9!UBERON:0010011;2.93e-07;9!UBERON:0000454;2.93e-07;9!UBERON:0000125;3.19e-07;9!UBERON:0002308;3.19e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.10e-46,114;UBERON:0004111,2.42e-25,240;UBERON:0001049,7.95e-24,56;UBERON:0005068,7.95e-24,56;UBERON:0006241,7.95e-24,56;UBERON:0007135,7.95e-24,56;UBERON:0000025,2.76e-22,192;UBERON:0000073,3.79e-22,53;UBERON:0002616,3.79e-22,53;UBERON:0002780,1.18e-19,41;UBERON:0001890,1.18e-19,41;UBERON:0003080,1.18e-19,41;UBERON:0006240,1.18e-19,41;UBERON:0001017,5.47e-19,81;UBERON:0003075,6.87e-19,82;UBERON:0007284,6.87e-19,82;UBERON:0001893,1.28e-17,34;UBERON:0000955,1.60e-17,68;UBERON:0006238,1.60e-17,68;UBERON:0003528,2.23e-17,34;UBERON:0002020,2.23e-17,34;UBERON:0002346,5.90e-17,86;UBERON:0001016,1.60e-16,89;UBERON:0002791,3.53e-16,32;UBERON:0001869,4.59e-16,32;UBERON:0010371,2.20e-15,104;UBERON:0003056,9.61e-15,61;UBERON:0002619,1.29e-14,22;UBERON:0011216,1.17e-13,223;UBERON:0001950,1.51e-13,20;UBERON:0006555,1.69e-13,16;UBERON:0004819,1.69e-13,16;UBERON:0000489,2.23e-13,31;UBERON:0004211,2.62e-13,15;UBERON:0009773,2.62e-13,15;UBERON:0001231,2.62e-13,15;UBERON:0001285,2.62e-13,15;UBERON:0007684,2.62e-13,15;UBERON:0004208,2.62e-13,15;UBERON:0002113,2.61e-12,26;UBERON:0003918,2.61e-12,26;UBERON:0011143,2.61e-12,26;UBERON:0005095,2.61e-12,26;UBERON:0007687,2.61e-12,26;UBERON:0000956,7.97e-12,25;UBERON:0000203,7.97e-12,25;UBERON:0000353,4.99e-11,15;UBERON:0001225,1.05e-10,12;UBERON:0008987,1.05e-10,12;UBERON:0004121,2.86e-10,171;UBERON:0000924,2.86e-10,171;UBERON:0006601,2.86e-10,171;UBERON:0004810,5.01e-10,10;UBERON:0000483,5.55e-10,306;UBERON:0005172,1.53e-09,54;UBERON:0005173,1.53e-09,54;UBERON:0000119,1.57e-09,309;UBERON:0004638,2.01e-09,18;UBERON:0001986,2.01e-09,18;UBERON:0004852,2.01e-09,18;UBERON:0010314,2.86e-09,132;UBERON:0003103,3.73e-08,68;UBERON:0001851,1.53e-07,15;UBERON:0002417,2.13e-07,60;UBERON:0000916,2.13e-07,60;UBERON:0000487,2.40e-07,22;UBERON:0002420,2.90e-07,9;UBERON:0007245,2.90e-07,9;UBERON:0010009,2.90e-07,9;UBERON:0010011,2.90e-07,9;UBERON:0000454,2.90e-07,9;UBERON:0000125,3.26e-07,9;UBERON:0002308,3.26e-07,9;UBERON:0005177,6.96e-07,101 | |||
|phase1_expression=0,0,0,0,0,1.74467704820074,0,0,0.522371256399677,2.45733936501509,9.76921635161399,0,0.527533956456907,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,0,0.273748850145768,0.627713197974014,0,0,0,0.393364276848904,0.383829398097213,0,3.67768489791571,0.30120591877825,0,0,0,22.6072338287832,1.10799081706375,0,0.434021741431704,0,0,0,0,0.755751887377619,0,0.464858073811369,0,0.619412741790207,0,0.768482119587302,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0.641858054152187,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,1.24564449799115,0.251248665256743,0.521482918420201,0,4.23779651843358,0,0.316462387440884,0,0,0.209658645508376,0.44931452458598,0.300353785683013,0,0.285012743741249,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0.382273228125229,5.28685314316103,11.2101712596307,10.7987474757782,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0,0,0.657751618414705,0.276350017785848,0.869409257205157,0.14828656316206,0,0,0.226618685395132,0,0,0.506039384039006,0,0,0,0.150575119077773,0,1.24930726552346,0,0,1.00803371612366,0.267440195783507,0,0,0.670700859703636,0.767175371061182,0,0.50133791063589,0.289693037921647,0,0,0.567208902984407,0.221729397462564,0.175669571386252,25.6064092598028,0.364295288292542,0.370784442784429,0,0,0,0.238490624305342,0,0.371457501329565,5.36658499890104,3.4409383804245,11.4556365530506,1.69592382577203,3.35599548967925,8.80377734208216,5.8518590630307,54.5259361847284,42.6919515224052,62.927475199758,37.8659558082598,26.6095237001479,52.9614664879528,4.41195696415042,5.67099363517232,29.4689103337463,28.9642890687759,23.5357994210143,24.5306619945413,15.1882505530901,15.5721482340846,7.9068250461638,11.6334079244498,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0.67355336034844,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.53717327336858,5.72766853240753,2.86804595389004,0.975789649036763,0.662648841607426,1.62671520017326,3.93912009058408,3.5324919122588,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,114.41409546682,29.4507724987236,2.4694440679884,1.47008711385542,3.80265104465493,3.9313088667105,5.90789906681404,0,1.47586126251736,0.857839051492628,1.42675371031213,6.74410519545717,0.100528972411631,1.85176890317059,0,0,0,1.97081688457631,0,42.4437356417557,50.9284063834272,43.9487091661922,2.37061319387782,1.71697232418975,0,0,0,2.81201501960331,0.671928512795438,2.55195175036296,0,0,1.15014803749563,0,0.088048434013226,0.621984346622316,0,0.37872730027914,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,3.57656445851882,1.690605505112,0,0,0,0,0,0.57191197463259,0.542621605391443,0,1.62868092146868,0,0,1.80863626235752,0,2.7992437530976,0,0,0,0,0,0,0.144781306667579,0,0,0,0.591092280605782,0,0.256686072559497,0.76228387266739,7.8083912314573,3.86644406388848,4.69045542936177,3.18969375826582,0.749007023947182,5.9832291840805,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0.606255142892519,0,0,0,0,0,0,0,0,4.45254199334973,0,0,0,0,0,0.241718899183244,1.00253235151642,6.62983120338454,0,0.182091168006717,0.524497659837696,133.103885807686,45.4390488916047,307.465109517327,121.295556462206,45.7038553106152,87.5747057345904,30.6168669497728,16.6255255398647,223.62951640092,20.320982815789,111.375129795777,162.865938475779,236.025586535758,70.7444224922083,0,0.261435451024901,87.9623929149215,44.2819771694603,60.8457598022247,14.0135775840902,4.94475110019054,8.16844049213821,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.661139661443912,0.768760269460425,0.765676274967505,4.75441570021085,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.47775344708365,0,0,0,0.288666338176536,6.03272047982209,0,14.4040015188472,0.43050537267123,0,0.443430153536676,0,0.507447609232169,2.29391162142713,1.13929437434833,0.714695326373367,0.411362273086194,2.59389324477087,1.08006287447623,0,6.62309240990334,0.962479855263359,1.47024129588619,0,0,0.0711418433484141,1.91311527274587,5.18906365725323,37.7265579160762,41.2763486311572,6.49243880549111,10.9510899464249,12.0964379887592,5.17043656050977,102.760135606928,42.1536526725992,0.802940375518498,8.87918711640609,0.851692475380653,10.6486656874287,0.307240764308458,1.11838053946208,1.50164227540718,1.56310476321632,0,2.46174797895425,5.40911356951966,26.9788294078234,7.04935025439248,0,8.35096621849796,0,0,0,0.95497793895076,11.2846578716403,1.84296421259539,23.8595435463912,21.94442896004,0,0,0.422250816255987,10.3608953890556,7.73594963487214,0.503865495708552,0,0,0,4.04407580162971,8.77203755910485,1.53471711068062,5.32674390439441,0,0,24.2333186523805,20.7800539882547,9.98068990005971,0.520855522170466,4.023159999825,3.62499787717397,0.796554137998498,0,1.18193840883968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| |||
|short_description=p1@SPNS2 | |||
}} |
Revision as of 13:11, 20 January 2014
Short description: | p1@SPNS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPNS2_5end |
Coexpression cluster: | C3643_Renal_signet_Hepatic_acute_mesothelioma_Retinal_smallcell |
Association with transcript: | 32bp_to_ENST00000329078, NM_001124758, uc002fxx.2_5end |
EntrezGene: | SPNS2 |
HGNC: | 26992 |
UniProt: | Q8IVW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.64e-14 | 36 |
kidney cell | 2.14e-14 | 17 |
kidney epithelial cell | 2.14e-14 | 17 |
endothelial cell of vascular tree | 4.43e-14 | 24 |
meso-epithelial cell | 1.86e-13 | 45 |
epithelial cell of nephron | 2.62e-13 | 15 |
kidney cortical cell | 1.05e-10 | 12 |
renal cortical epithelial cell | 1.05e-10 | 12 |
kidney tubule cell | 5.01e-10 | 10 |
nephron tubule epithelial cell | 5.01e-10 | 10 |
blood vessel endothelial cell | 2.01e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.01e-09 | 18 |
lining cell | 2.55e-07 | 58 |
barrier cell | 2.55e-07 | 58 |