FFCP PHASE1:Hg19::chr16:811073..811139,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |||
|association_with_transcript=0bp_to_NM_013404,uc002cjv.1,uc002cjw.1,uc002cjx.1_5end | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_MSLN_5end | |||
|id=chr16:811073..811139,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.43e-15!254;CL:0000077!2.23e-10!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;6.77e-13;19!CL:1000507;1.38e-07;10!CL:1000494;1.38e-07;10!CL:1000449;1.65e-07;15!CL:0000349;5.01e-07;19!CL:0002681;8.00e-07;12!CL:0002584;8.00e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.09e-19,253;CL:0000077,6.30e-13,19;CL:1000507,1.41e-07,10;CL:1000494,1.41e-07,10;CL:1000449,1.69e-07,15;CL:0000349,5.30e-07,19;CL:0002681,8.15e-07,12;CL:0002584,8.15e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.57e-10;29 | |||
|ontology_enrichment_disease=DOID:305!2.71e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.42e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.03e-16!169;UBERON:0000925!2.03e-16!169;UBERON:0006595!2.03e-16!169;UBERON:0000062!6.88e-16!511;UBERON:0000064!1.40e-14!219;UBERON:0000466!2.63e-13!126;UBERON:0000464!7.03e-13!104;UBERON:0000077!2.03e-12!130;UBERON:0004921!2.03e-12!129;UBERON:0004185!2.03e-12!129;UBERON:0001007!2.98e-12!155;UBERON:0001555!2.98e-12!155;UBERON:0007026!2.98e-12!155;UBERON:0001041!3.07e-11!98;UBERON:0001004!1.59e-10!72;UBERON:0005631!1.10e-09!14;UBERON:0000158!1.10e-09!14;UBERON:0008947!1.24e-09!38;UBERON:0003258!1.24e-09!38;UBERON:0000065!3.14e-09!53;UBERON:0002553!3.23e-09!70;UBERON:0007023!4.03e-09!115;UBERON:0005177!6.60e-09!107;UBERON:0001737!9.92e-09!9;UBERON:0003886!4.07e-08!63;UBERON:0000922!7.88e-08!612;UBERON:0003133!7.90e-08!48;UBERON:0002050!8.82e-08!605;UBERON:0005423!8.82e-08!605;UBERON:0003887!9.57e-08!21;UBERON:0000923!1.71e-07!604;UBERON:0005291!1.71e-07!604;UBERON:0006598!1.71e-07!604;UBERON:0002532!1.71e-07!604;UBERON:0000072!3.03e-07!46;UBERON:0000080!5.39e-07!18;UBERON:0002120!5.39e-07!18;UBERON:0004875!5.39e-07!18;UBERON:0005721!5.39e-07!18;UBERON:0005754!5.39e-07!18;UBERON:0007297!5.39e-07!18;UBERON:0000058!5.61e-07!26;UBERON:0004876!7.90e-07!20;UBERON:0003100!9.03e-07!41;UBERON:0000481!9.93e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.86e-11;9!UBERON:0001557;2.86e-11;9!UBERON:0005631;1.41e-08;10!UBERON:0000158;1.41e-08;10!UBERON:0000065;4.81e-08;44!UBERON:0001851;5.49e-08;15!UBERON:0000072;1.34e-07;37!UBERON:0004211;1.38e-07;10!UBERON:0009773;1.38e-07;10!UBERON:0001231;1.38e-07;10!UBERON:0004810;1.38e-07;10!UBERON:0006555;1.65e-07;15!UBERON:0004819;1.65e-07;15!UBERON:0001285;1.65e-07;15!UBERON:0007684;1.65e-07;15!UBERON:0004921;4.60e-07;33!UBERON:0000478;6.75e-07;24!UBERON:0001225;8.00e-07;12!UBERON:0008987;8.00e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.22e-14,160;UBERON:0000925,1.22e-14,160;UBERON:0006595,1.22e-14,160;UBERON:0004921,2.27e-13,118;UBERON:0005631,7.86e-13,14;UBERON:0000158,7.86e-13,14;UBERON:0001041,1.36e-12,87;UBERON:0001007,3.00e-12,145;UBERON:0001555,3.00e-12,145;UBERON:0007026,3.00e-12,145;UBERON:0008947,4.77e-12,38;UBERON:0003258,4.77e-12,38;UBERON:0001737,2.83e-11,9;UBERON:0005177,3.37e-10,101;UBERON:0003133,7.55e-09,48;UBERON:0006555,2.56e-08,16;UBERON:0004819,2.56e-08,16;UBERON:0003100,2.57e-08,41;UBERON:0001008,3.07e-08,48;UBERON:0003124,4.30e-08,7;UBERON:0001851,5.62e-08,15;UBERON:0004175,7.65e-08,25;UBERON:0006554,7.90e-08,47;UBERON:0001004,1.12e-07,74;UBERON:0000065,1.27e-07,54;UBERON:0004810,1.41e-07,10;UBERON:0004211,1.69e-07,15;UBERON:0009773,1.69e-07,15;UBERON:0001231,1.69e-07,15;UBERON:0001285,1.69e-07,15;UBERON:0007684,1.69e-07,15;UBERON:0004208,1.69e-07,15;UBERON:0003134,3.18e-07,37;UBERON:0000474,3.18e-07,37;UBERON:0005156,3.90e-07,59;UBERON:0000990,3.90e-07,59;UBERON:0000478,7.14e-07,24;UBERON:0000072,7.21e-07,47;UBERON:0002553,7.62e-07,61;UBERON:0001225,8.15e-07,12;UBERON:0008987,8.15e-07,12;UBERON:0009569,9.79e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.522371256399677,2.21160542851358,8.37361401566913,82.7892800373353,89.9445395759027,0,0,0,0,0,0,0,0,0,1.43117993565528,1.64249310087461,1.25542639594803,0,0,0,0,0,4.02521920621798,0,5.12050061923025,11.4623743151704,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0,0,0,0,0,0.898893937780338,0,0.320929027076094,0,0,0,2.13112375266347,0,1.13477044938228,1.24564449799115,0,0,1.08594422352558,3.63239701580021,0.368277635987565,1.58231193720442,0,0.212604299965044,0,0,0,0,1.42506371870624,0.59675003159727,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0.50133791063589,2.75208386025565,0,2.91980922181582,0.0945348171640679,0,0.087834785693126,14.145740153753,54.6442932438813,51.9098219898201,0.324547393654683,0.348259474598534,0,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18047026071267,0,0,0.132409180813219,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0.816616685019573,0.122834317311768,0.619954687054593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.4499962275583,0.272746120590835,10.3249654340041,0,0,0,0,0,0,0,0,0,0,0,69.9193188235477,77.5489574359268,75.9184744132968,75.4410773489575,88.0232954133321,68.0966676848847,73.4830629472896,84.5714514690242,76.9494313892781,0,0,8.231480226628,1.47008711385542,0,0,1.18157981336281,0,6.14942192715568,0,1.20725313949488,8.99214026060957,3.61904300681871,13.4253245479868,0,0,0,3.70977295920246,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,12.8964272692102,1.45316969256981,6.51750554580859,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,3.01439377059586,1.74306691720059,10.0972721093878,0,0,4.21667878966063,0,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0.601892199455438,0,8.27784570340039,0,1.47495334833363,0,0,0,0,0,0,130.041728150445,399.445054825193,204.718228584194,0,0,0,0.128139149255701,1.02341449813341,0,1.48418066444991,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,23.9135794840928,7.00839567650174,16.471345152714,7.30696123266303,0.73886140225013,0,0,1.29549549661284,1.54227252690289,18.9662506280697,44.650389873082,13.253566198342,30.7498123303628,2.46262230194396,0,0,0,1.31205858279882,0.325378394664303,12.6740444326698,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0.960950336825531,0.638063562472921,0.910420027699949,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.511795582622668,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0.196498082026242,0,0,0,0,0,0,6.44688155260931,5.3624182042863,15.2447378805852,13.9332825149633,1.29151611801369,1.68471475667626,1.7737206141467,0.918893600827838,0,0,0,0,0,0,0,0,0,0,92.870241856811,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0.403599414382095,106.887405660272,0,0,0,0,0,0,0,0,0,0,40.2352161877673,0,0.121360521749513,0,0,1612.7189944031,141.355188076336,1482.05038762879,0,0.281338832821026,0.111308705022906,0,0,21.3195347428645,12.4327761989016,0,0,0,0,3.59473404589307,71.9665122195949,0,1.67693789582787,0,0,0.969332746095218,1.11321717794222,0,0,0,0.724999575434793,24.1242110365259,0,11.3466087248609,0,0,0,0.885741385813839,0.723578631752448,0,0,0.295547618953547,0,375.293006822921,0,8.92622998644046,0,0.23056390438806,0,0.108647371922008,346.116258309133,2.74792780205587,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,8.84575645033392,8.55442202907076,0,0,0,0.606610196826093,40.1288823649394,0,0,24.066748128647,0,53.2688943846677,13.308978765353,0,0.568679216656392,0,0,0,0,0,0,0.853828638089378,0,1.04135843001079,0,4.44001953560053,34.0717003071959,0,48.6684346384098,42.3918039099876,43.1927304099881,3.006659511141,0,59.43293482528,0,0,0.379864775735272,102.077821787567,9.29842314917791,15.7955216107121,23.5775339306914,68.010676896738,0,0,1.87271237384595,0,245.121796001467,0.135904206073614,0.209205692624666,0,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0,0,4.19325901047881,1.28767814440971,0.669514372325618,1.47803639470798,0,1.16495949527454,0.315132729228895,0.741742725430498,0.404421263125109,0,0,0,0.272406812223151,0,0,0,0,0,0.364497339948148,0,1.02447419488958,10.5433722151346,0,0.717149357331379,33.7770747282224,4.2881719582402,0,0,0,5.18532894720761,0,0,0,0,0,0.293104467356165,1.32506888912221,0,0,0.342173675768659,45.108161428267,189.547657307658,75.4580664478397,137.113127319922,0.992332043623902,0,0,40.2154992395215,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,1.80079568530012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02663857611035,1.34940933649081,0.776314784381297,0,0.797525143673985,10.4349012362347,4.35747066091933,19.0402606084398,4.88244879845594,0,3.7593694964871,0,1.59238355479446,0,0,0,0,71.6545769115168,138.958151210952,5.21988583930423,135.570143456339,47.9251521850336,51.149971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| |||
|short_description=p1@MSLN | |||
}} |
Revision as of 01:43, 12 January 2014
Short description: | p1@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_NM_013404, uc002cjv.1, uc002cjw.1, uc002cjx.1_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.09e-19 | 253 |
mesothelial cell | 6.30e-13 | 19 |
kidney tubule cell | 1.41e-07 | 10 |
nephron tubule epithelial cell | 1.41e-07 | 10 |
epithelial cell of nephron | 1.69e-07 | 15 |
extraembryonic cell | 5.30e-07 | 19 |
kidney cortical cell | 8.15e-07 | 12 |
renal cortical epithelial cell | 8.15e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.42e-10 | 106 |