FFCP PHASE1:Hg19::chr12:20848377..20848399,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53919 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13819 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NYB5,Q5JPA4,B7Z3Q3,B7Z251,F5GZD6 | |||
|association_with_transcript=0bp_to_ENST00000266509,ENST00000381552,ENST00000540354,NM_001145944,NM_017435,uc001rei.2,uc010sik.1_5end | |||
|coexpression_cluster_id=C1305 | |||
|description=CAGE_peak_5_at_SLCO1C1_5end | |||
|id=chr12:20848377..20848399,+ | |||
|ontology_enrichment_celltype=CL:0002605!4.65e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.45e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.57e-84!57;UBERON:0005068!3.57e-84!57;UBERON:0006241!3.57e-84!57;UBERON:0007135!3.57e-84!57;UBERON:0001017!4.07e-75!82;UBERON:0005743!4.81e-74!86;UBERON:0002616!2.20e-73!59;UBERON:0002780!1.56e-70!41;UBERON:0001890!1.56e-70!41;UBERON:0006240!1.56e-70!41;UBERON:0003080!1.31e-68!42;UBERON:0000073!4.20e-68!94;UBERON:0001016!4.20e-68!94;UBERON:0007023!2.69e-66!115;UBERON:0000955!8.45e-63!69;UBERON:0006238!8.45e-63!69;UBERON:0002346!9.29e-61!90;UBERON:0001893!3.88e-60!34;UBERON:0002020!6.72e-60!34;UBERON:0003528!6.72e-60!34;UBERON:0003075!1.08e-58!86;UBERON:0007284!1.08e-58!86;UBERON:0002791!3.79e-58!33;UBERON:0001869!8.55e-56!32;UBERON:0003056!9.64e-47!61;UBERON:0000956!2.45e-41!25;UBERON:0000203!2.45e-41!25;UBERON:0000924!4.58e-37!173;UBERON:0006601!4.58e-37!173;UBERON:0000153!9.58e-37!129;UBERON:0007811!9.58e-37!129;UBERON:0000033!5.92e-36!123;UBERON:0002619!7.36e-36!22;UBERON:0004121!4.10e-35!169;UBERON:0001950!1.55e-31!20;UBERON:0000025!1.70e-20!194;UBERON:0002420!4.03e-20!9;UBERON:0007245!4.03e-20!9;UBERON:0010009!4.03e-20!9;UBERON:0010011!4.03e-20!9;UBERON:0000454!4.03e-20!9;UBERON:0002308!7.35e-20!9;UBERON:0000125!7.35e-20!9;UBERON:0004111!1.08e-17!241;UBERON:0003076!2.52e-16!15;UBERON:0003057!2.52e-16!15;UBERON:0009663!4.35e-16!7;UBERON:0000477!1.24e-14!286;UBERON:0002298!6.28e-14!8;UBERON:0000349!4.67e-12!5;UBERON:0002021!1.05e-11!5;UBERON:0001894!1.69e-11!7;UBERON:0006222!1.69e-11!7;UBERON:0000475!1.83e-11!365;UBERON:0001872!2.87e-11!5;UBERON:0000483!3.74e-11!309;UBERON:0004733!4.63e-11!12;UBERON:0002028!4.63e-11!12;UBERON:0007277!4.63e-11!12;UBERON:0000119!6.67e-11!312;UBERON:0001871!2.75e-10!7;UBERON:0004732!4.37e-10!13;UBERON:0000064!5.38e-10!219;UBERON:0000200!8.03e-10!6;UBERON:0000369!9.18e-10!4;UBERON:0002435!9.18e-10!4;UBERON:0000204!9.18e-10!4;UBERON:0010082!9.18e-10!4;UBERON:0000481!2.22e-09!347;UBERON:0001896!3.12e-08!3;UBERON:0005290!3.12e-08!3;UBERON:0010096!3.12e-08!3;UBERON:0000062!3.30e-08!511;UBERON:0002771!3.67e-08!3;UBERON:0000922!4.77e-08!612;UBERON:0005383!7.83e-08!3;UBERON:0005382!7.83e-08!3;UBERON:0006331!1.47e-07!3;UBERON:0002240!1.53e-07!3;UBERON:0000988!1.87e-07!3;UBERON:0000923!2.24e-07!604;UBERON:0005291!2.24e-07!604;UBERON:0006598!2.24e-07!604;UBERON:0002532!2.24e-07!604;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000468!5.80e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.13e-54;41!UBERON:0001890;2.13e-54;41!UBERON:0000073;8.75e-52;53!UBERON:0002616;8.75e-52;53!UBERON:0001893;6.49e-51;34!UBERON:0003528;2.27e-48;34!UBERON:0002020;2.27e-48;34!UBERON:0002791;3.49e-48;32!UBERON:0001869;3.85e-47;32!UBERON:0000956;6.93e-35;25!UBERON:0000203;6.93e-35;25!UBERON:0002619;1.01e-34;22!UBERON:0001017;3.10e-30;75!UBERON:0000125;1.02e-29;9!UBERON:0002308;1.02e-29;9!UBERON:0001950;1.03e-27;20!UBERON:0002298;4.36e-26;6!UBERON:0000955;2.95e-25;68!UBERON:0001016;3.41e-23;83!UBERON:0002420;3.60e-23;9!UBERON:0007245;3.60e-23;9!UBERON:0010009;3.60e-23;9!UBERON:0010011;3.60e-23;9!UBERON:0000454;3.60e-23;9!UBERON:0009663;4.61e-22;7!UBERON:0001894;1.26e-15;7!UBERON:0000349;8.91e-15;5!UBERON:0007023;1.44e-14;114!UBERON:0001896;1.74e-14;3!UBERON:0005290;1.74e-14;3!UBERON:0000988;2.22e-13;3!UBERON:0004733;9.45e-13;12!UBERON:0002028;9.45e-13;12!UBERON:0000200;4.21e-12;6!UBERON:0004732;1.01e-11;13!UBERON:0011216;1.04e-10;132!UBERON:0000369;1.59e-10;4!UBERON:0002435;1.59e-10;4!UBERON:0003296;1.59e-10;4!UBERON:0010133;1.59e-10;4!UBERON:0000204;1.59e-10;4!UBERON:0002784;2.06e-10;4!UBERON:0001954;2.42e-10;2!UBERON:0003022;2.42e-10;2!UBERON:0002421;2.42e-10;2!UBERON:0002600;2.42e-10;2!UBERON:0000007;5.48e-10;2!UBERON:0002771;7.84e-10;2!UBERON:0001897;7.84e-10;2!UBERON:0001875;7.84e-10;2!UBERON:0006514;7.84e-10;2!UBERON:0010225;7.84e-10;2!UBERON:0002148;1.73e-09;2!UBERON:0006331;1.73e-09;2!UBERON:0009662;1.73e-09;2!UBERON:0002021;9.30e-09;5!UBERON:0001872;3.22e-08;5!UBERON:0001870;6.36e-07;3!UBERON:0005383;6.36e-07;3!UBERON:0005382;6.36e-07;3!UBERON:0010314;6.60e-07;132 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.684372125364421,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55732473911449,0,2.31986643833309,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0.296964680832639,0,0.994147647766298,2.53204949538923,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,2.04089815956073,0,0,0,0,0,0,0,0,0,0,0.885741385813839,3.73848959738765,0,0.552896299656123,0.591095237907095,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,2.08943512240099,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,1.32952671507345,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,2.19048606227189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,3.67749196501254,0.160753148465019,0,0,0,0,1.70098758642469,0,0.0788057072991982,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,1.19009341568421,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,2.56255156294123,3.1297732676625,6.30750115259078,3.88251680378983,1.4903136705932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,12.0217691331232,0.558644917973244,0,0,0,0,0,1.28458450192919,4.25089728976755,2.55414174491442,1.64093091392604,0.504143392443436,0.96820153449905,1.45328081068666,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,1.2832141077495,1.56215619722769,1.86018116851066,1.45856363445986,0.546974809018219,0,0,1.58284119923659,0,0,1.00885116665647,3.03482802118316,1.36597314810779,0.0887023701626388,0,0,1.4953341254903,0.855046056317038,0,0,0.156986185701028,1.72827148907602,0,0,0,0,4.21711610642272,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,1.76677620403451,1.48523200163543,0.8453114551668,0,0,0,0,0,0,0,0,0,1.86341458096887,0,0.883889372481891,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,1.65833887891756,2.48239190068549,0.213233981900981,0.714193294391221,0,0,0,0.25458863311266,0,0,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p5@SLCO1C1 | |||
}} |
Revision as of 12:34, 11 January 2014
Short description: | p5@SLCO1C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLCO1C1_5end |
Coexpression cluster: | C1305_neuroectodermal_medulla_retina_peripheral_hippocampus_caudate_pituitary |
Association with transcript: | 0bp_to_ENST00000266509, ENST00000381552, ENST00000540354, NM_001145944, NM_017435, uc001rei.2, uc010sik.1_5end |
EntrezGene: | SLCO1C1 |
HGNC: | 13819 |
UniProt: | Q9NYB5Q5JPA4B7Z3Q3B7Z251F5GZD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data