FFCP PHASE1:Hg19::chr1:153600120..153600131,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6284 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10490 | |||
|TSSclassifier=strong | |||
|UniProt=Q99584 | |||
|association_with_transcript=-3bp_to_NM_001024211,uc001fch.2_5end | |||
|description=CAGE_peak_9_at_S100A13_5end | |||
|id=chr1:153600120..153600131,- | |||
|ontology_enrichment_celltype=CL:0000222!1.02e-18!119;CL:0000220!3.18e-18!246;CL:0002321!6.90e-18!248;CL:0002078!7.96e-16!44;CL:0000115!2.03e-13!35;CL:0000213!2.37e-10!57;CL:0000215!2.37e-10!57;CL:0000359!3.11e-10!32;CL:0002139!3.18e-10!24;CL:0000066!1.23e-09!254;CL:0000183!3.44e-09!59;CL:0000192!5.34e-09!42;CL:0000514!5.34e-09!42;CL:0000071!1.99e-08!18;CL:0002546!1.99e-08!18;CL:0000680!4.86e-08!57;CL:0000056!4.86e-08!57;CL:0000355!4.86e-08!57;CL:1000449!1.07e-07!16;CL:0002681!1.22e-07!13;CL:0002584!1.22e-07!13;CL:0000187!2.34e-07!54;CL:1000497!4.63e-07!18;CL:0002518!4.63e-07!18;CL:0000055!5.69e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000115;2.07e-14;36!CL:0002078;1.99e-13;45!CL:1000449;1.42e-12;15!CL:0002139;4.91e-12;24!CL:0002681;5.89e-12;12!CL:0002584;5.89e-12;12!CL:1000497;6.40e-12;17!CL:0002518;6.40e-12;17!CL:0000071;1.21e-09;18!CL:0000359;5.56e-09;32!CL:1000507;3.16e-08;10!CL:1000494;3.16e-08;10!CL:1000746;1.36e-07;7!CL:1000612;1.36e-07;7!CL:0000213;4.24e-07;58!CL:0000215;4.24e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,2.65e-19,45;CL:0000115,1.46e-17,36;CL:0000222,1.40e-15,121;CL:1000449,1.95e-12,15;CL:0002321,3.00e-12,250;CL:0002139,6.46e-12,24;CL:1000497,7.37e-12,17;CL:0002518,7.37e-12,17;CL:0002681,8.17e-12,12;CL:0002584,8.17e-12,12;CL:0000213,7.11e-11,58;CL:0000215,7.11e-11,58;CL:0000071,8.93e-10,18;CL:0002546,8.93e-10,18;CL:0000359,1.27e-09,32;CL:1000507,4.96e-08,10;CL:1000494,4.96e-08,10;CL:0000066,7.73e-08,253;CL:1000746,1.28e-07,7;CL:1000612,1.28e-07,7 | |||
|ontology_enrichment_development_v019=CL:0002546;1.21e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!1.15e-18!309;UBERON:0000119!1.67e-18!312;UBERON:0000055!3.30e-17!69;UBERON:0004111!4.61e-17!241;UBERON:0002049!3.84e-16!79;UBERON:0007798!3.84e-16!79;UBERON:0000025!9.10e-16!194;UBERON:0003914!1.16e-15!118;UBERON:0001981!6.24e-15!60;UBERON:0007500!6.24e-15!60;UBERON:0004537!6.24e-15!60;UBERON:0006965!6.24e-15!60;UBERON:0000477!8.59e-14!286;UBERON:0004872!1.35e-13!84;UBERON:0001637!1.77e-13!42;UBERON:0003509!1.77e-13!42;UBERON:0004572!1.77e-13!42;UBERON:0000480!1.76e-11!626;UBERON:0000467!2.15e-11!625;UBERON:0000486!7.30e-11!82;UBERON:0000475!3.25e-10!365;UBERON:0005256!8.86e-10!143;UBERON:0001009!1.36e-09!113;UBERON:0004573!2.32e-09!33;UBERON:0004571!2.32e-09!33;UBERON:0000468!2.78e-09!659;UBERON:0000064!1.07e-08!219;UBERON:0004535!1.22e-08!110;UBERON:0004290!1.57e-08!70;UBERON:0000490!1.68e-08!138;UBERON:0001986!1.99e-08!18;UBERON:0004638!1.99e-08!18;UBERON:0004852!1.99e-08!18;UBERON:0000914!5.34e-08!83;UBERON:0002329!5.34e-08!83;UBERON:0003077!5.34e-08!83;UBERON:0003059!5.34e-08!83;UBERON:0007282!5.34e-08!83;UBERON:0009618!5.34e-08!83;UBERON:0007285!5.34e-08!83;UBERON:0006914!5.52e-08!25;UBERON:0002100!1.04e-07!216;UBERON:0000481!1.05e-07!347;UBERON:0004211!1.07e-07!16;UBERON:0001285!1.07e-07!16;UBERON:0007684!1.07e-07!16;UBERON:0003220!1.07e-07!16;UBERON:0004208!1.07e-07!16;UBERON:0001225!1.22e-07!13;UBERON:0008987!1.22e-07!13;UBERON:0000080!1.26e-07!18;UBERON:0002120!1.26e-07!18;UBERON:0004875!1.26e-07!18;UBERON:0005721!1.26e-07!18;UBERON:0005754!1.26e-07!18;UBERON:0007297!1.26e-07!18;UBERON:0006555!1.31e-07!17;UBERON:0005103!1.31e-07!17;UBERON:0000083!1.31e-07!17;UBERON:0009201!1.31e-07!17;UBERON:0004819!1.31e-07!17;UBERON:0006553!1.31e-07!17;UBERON:0003074!1.31e-07!17;UBERON:0003060!1.31e-07!17;UBERON:0000923!1.65e-07!604;UBERON:0005291!1.65e-07!604;UBERON:0006598!1.65e-07!604;UBERON:0002532!1.65e-07!604;UBERON:0002050!2.49e-07!605;UBERON:0005423!2.49e-07!605;UBERON:0000487!4.53e-07!22;UBERON:0002385!5.22e-07!63;UBERON:0001015!5.22e-07!63;UBERON:0000383!5.22e-07!63;UBERON:0001134!5.63e-07!61;UBERON:0002036!5.63e-07!61;UBERON:0003082!5.63e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.42e-12;15!UBERON:0004819;1.42e-12;15!UBERON:0001285;1.42e-12;15!UBERON:0007684;1.42e-12;15!UBERON:0001225;5.89e-12;12!UBERON:0008987;5.89e-12;12!UBERON:0003914;4.35e-11;74!UBERON:0007500;6.39e-11;56!UBERON:0001981;6.39e-11;56!UBERON:0004537;6.39e-11;56!UBERON:0001637;7.55e-11;42!UBERON:0003509;7.55e-11;42!UBERON:0004572;7.55e-11;42!UBERON:0000353;1.99e-10;15!UBERON:0004638;1.21e-09;18!UBERON:0001986;1.21e-09;18!UBERON:0004852;1.21e-09;18!UBERON:0000055;4.64e-09;65!UBERON:0001851;9.92e-09;15!UBERON:0006914;1.38e-08;25!UBERON:0004211;3.16e-08;10!UBERON:0009773;3.16e-08;10!UBERON:0001231;3.16e-08;10!UBERON:0004810;3.16e-08;10!UBERON:0000025;3.21e-08;93!UBERON:0000487;4.88e-08;22!UBERON:0004573;5.96e-08;33!UBERON:0004571;5.96e-08;33!UBERON:0006554;1.19e-07;30!UBERON:0001008;1.19e-07;30!UBERON:0000074;1.36e-07;7!UBERON:0001229;1.36e-07;7!UBERON:0002049;4.24e-07;75!UBERON:0007798;4.24e-07;75!UBERON:0002113;5.82e-07;24!UBERON:0011143;5.82e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,7.18e-19,68;UBERON:0007500,4.58e-17,59;UBERON:0001981,4.58e-17,59;UBERON:0004537,4.58e-17,59;UBERON:0006965,4.58e-17,59;UBERON:0003914,9.48e-17,117;UBERON:0002049,4.15e-15,78;UBERON:0007798,4.15e-15,78;UBERON:0001637,4.22e-15,42;UBERON:0003509,4.22e-15,42;UBERON:0004572,4.22e-15,42;UBERON:0004872,2.10e-14,83;UBERON:0000025,3.40e-13,192;UBERON:0004211,1.95e-12,15;UBERON:0009773,1.95e-12,15;UBERON:0001231,1.95e-12,15;UBERON:0001285,1.95e-12,15;UBERON:0007684,1.95e-12,15;UBERON:0004208,1.95e-12,15;UBERON:0000483,3.15e-12,306;UBERON:0001225,8.17e-12,12;UBERON:0008987,8.17e-12,12;UBERON:0000119,8.36e-12,309;UBERON:0004111,2.26e-11,240;UBERON:0006555,2.44e-11,16;UBERON:0004819,2.44e-11,16;UBERON:0001009,1.06e-10,112;UBERON:0000353,2.38e-10,15;UBERON:0004638,8.93e-10,18;UBERON:0001986,8.93e-10,18;UBERON:0004852,8.93e-10,18;UBERON:0004535,2.15e-09,109;UBERON:0004573,3.07e-09,33;UBERON:0004571,3.07e-09,33;UBERON:0007503,4.08e-09,78;UBERON:0006914,1.02e-08,25;UBERON:0001851,1.25e-08,15;UBERON:0000486,1.69e-08,83;UBERON:0000487,3.53e-08,22;UBERON:0004810,4.96e-08,10;UBERON:0010532,1.28e-07,7;UBERON:0000074,1.28e-07,7;UBERON:0001229,1.28e-07,7;UBERON:0001230,1.28e-07,7;UBERON:0003220,1.28e-07,7;UBERON:0005749,1.28e-07,7;UBERON:0004199,1.28e-07,7;UBERON:0004209,1.28e-07,7;UBERON:0004198,1.28e-07,7;UBERON:0000490,5.95e-07,148 | |||
|phase1_expression=1.81678379270557,0.214100523890983,0.422863212287913,4.00293193412522,0.893922188854576,0.872338524100369,0,0.631719873426831,0.261185628199839,0.982935746006035,5.58240934377942,3.05817920982241,1.31883489114227,0.247532705920093,0,0,1.20538905604795,0.730310090387373,1.95173119516203,0.738726348460727,1.42800483870977,0,1.43117993565528,0.958120975510189,0.627713197974014,0,0,0.0787107813136792,0,0,0,3.67768489791571,1.50602959389125,0,0,0,0,0,0,0,2.46307021663917,1.94336199611388,1.54545340580512,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0.236482229888585,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,1.44575660953827,2.50668955317945,1.15877215168659,3.1811437882044,0,0.472674085820339,0.443458794925128,0.614843499851882,0.785874452986276,3.64295288292542,1.11235332835329,1.9472843619281,0.696518949197069,1.59549552622638,0.715471872916026,0,0.371457501329565,4.17401055470081,0.860234595106124,0.694281003215189,2.82653970962005,1.67799774483962,1.6507082516404,3.9709043641994,2.32575083252396,1.06729878806013,0.66944122552934,4.02829317109147,10.6438094800592,2.19655851793353,2.94130464276695,3.24056779152704,0.714397826272638,1.34717623575702,1.0135033243499,4.5994991239765,1.89853131913626,1.09921046358244,0,0,3.05265836499774,1.49091585508596,1.2663051166458,0.662045904066094,0.286836620748814,0,1.12135520028461,3.20246987189115,1.72667283892012,0.311211035399766,0.538842688278752,1.30769522490767,0.302714855289863,0.576175924479999,0.234321431833797,1.24864030732128,4.56377457235559,0.149448680551801,0.352303495931295,1.94247533241758,0.561803226808994,1.02077085627447,0.368502951935304,0.413303124703062,0,0.741800787835671,1.82032272387605,0.718618141816238,0.336672227908132,0.500474079487857,0.554128230968366,0.438977620880838,0.612975591598039,0.751190294532984,2.49550802952046,0,0.213557388818567,0,0.300091096084402,1.03052529238439,0,0.18611685633159,0,0.876933046450788,0.252433774244115,0.368199594569197,0,0,0.604512589365842,1.52604533079439,3.86521706326594,4.36393792945335,1.72082757233402,0.121973706129595,0.132529768321485,0,0,0,0.72995471815166,3.12899064659632,1.28648187638577,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.196221465125346,0,0.738155454624648,2.80483547606892,1.2347220339942,0,0,0,1.18157981336281,0,0.983907508344908,0.686271241194102,0.439001141634502,4.49607013030478,0.402115889646523,0.277765335475589,0,3.11980435583874,0,0.34779121492523,0.469634776943287,2.30986316417718,2.31492756288305,1.33177906564219,0,0,0.738651018262192,3.7440682422278,2.22946743433092,2.81201501960331,1.34385702559088,0.141775097242386,0.895585227028483,0.290633938513962,1.15014803749563,0.492663237895943,1.23267807618516,0,0,0.12624243342638,1.90493682876507,0,3.51652341630141,0,0.616964956219941,3.00343057843917,0.571652865261156,0.672786506072164,0,0.66004457238855,0.646358578788889,3.57656445851882,0,1.06375246633948,1.04007436911366,1.02882949704857,0,0,0.142977993658148,1.62786481617433,0,1.30294473717494,0.355391948742546,0.791951872933429,1.50719688529793,0.871533458600294,0.99972991182057,0,0.502257091432126,0,0.239624855491583,1.14861935834114,0,1.15825045334063,1.2328579353023,1.25342674267927,0,0,0,0,0.254094624222463,0,0,1.00509759200609,0,0,0,0,0.36807447515742,0,0,1.24782516918484,0.713715955188647,0.630809660135739,0.35142424497814,0.300946099727719,0,0,0.664225598535437,2.39679919104214,0.347534457872331,2.34961388955289,1.37257369524342,0,0,0,3.63753085735511,8.32177197552485,1.81434175997808,1.98486246255021,0.767309866440312,0.841980283299221,0.640695746278505,0,1.28683136914886,1.48418066444991,1.54209693802656,1.24293207719189,1.39616165223476,1.55776328755086,1.27831416305955,0.846016147141356,0.601519410909855,0.736647911487171,0.229628896329213,0,0.131124414959424,4.06079651616671,2.15642943892361,7.84349769176855,0,2.42768746453614,3.4120015221269,3.06168669497728,1.51141141271498,4.62681758070868,2.16757150035082,2.50844886927427,3.56826782263054,2.49322802678617,2.0148727924996,0,0,0.512900250232778,0,0.976135183992909,0.206082023295445,0.54941678891006,1.15513299888823,1.72279661398852,0,0,0.676695028044854,0.924291702687866,0.767518373630648,0.827019434907183,0.214840489736547,0.435050081742686,0.93749290157711,0.0890320356467374,1.98341898433174,1.53752053892085,0.127612712494584,0.4046311234222,0.464845549297286,0.31481234683064,3.485186350803,2.7723022215848,2.66153015158511,4.34966496037536,3.7064843820784,2.86249773483982,0.744316738719335,0.316379424718726,0.953150969619124,0.511795582622668,0.42793898803392,0.95460974377781,2.35484592059769,0.899362287916574,0.274537029736055,0.235624804691373,3.63928466831969,1.58510321173008,4.63384301862879,0.97526747817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| |||
|short_description=p9@S100A13 | |||
}} |
Revision as of 21:03, 10 January 2014
Short description: | p9@S100A13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_S100A13_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_NM_001024211, uc001fch.2_5end |
EntrezGene: | S100A13 |
HGNC: | 10490 |
UniProt: | Q99584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 2.65e-19 | 45 |
endothelial cell | 1.46e-17 | 36 |
mesodermal cell | 1.40e-15 | 121 |
epithelial cell of nephron | 1.95e-12 | 15 |
embryonic cell | 3.00e-12 | 250 |
endothelial cell of vascular tree | 6.46e-12 | 24 |
kidney cell | 7.37e-12 | 17 |
kidney epithelial cell | 7.37e-12 | 17 |
kidney cortical cell | 8.17e-12 | 12 |
renal cortical epithelial cell | 8.17e-12 | 12 |
lining cell | 7.11e-11 | 58 |
barrier cell | 7.11e-11 | 58 |
blood vessel endothelial cell | 8.93e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.93e-10 | 18 |
vascular associated smooth muscle cell | 1.27e-09 | 32 |
kidney tubule cell | 4.96e-08 | 10 |
nephron tubule epithelial cell | 4.96e-08 | 10 |
epithelial cell | 7.73e-08 | 253 |
glomerular cell | 1.28e-07 | 7 |
kidney corpuscule cell | 1.28e-07 | 7 |