FFCP PHASE1:Hg19::chr1:20465872..20465881,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30040 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZM2 | |||
|association_with_transcript=49bp_to_ENST00000465062,NM_022819,uc009vpp.1_5end | |||
|description=CAGE_peak_2_at_PLA2G2F_5end | |||
|id=chr1:20465872..20465881,+ | |||
|ontology_enrichment_celltype=CL:1000507!3.17e-54!12;CL:1000494!3.17e-54!12;CL:1000449!1.04e-40!16;CL:1000497!3.39e-36!18;CL:0002518!3.39e-36!18;CL:0000239!2.99e-25!3;CL:1000615!2.99e-25!3;CL:0002306!2.99e-25!3;CL:0002681!7.26e-23!13;CL:0002584!7.26e-23!13;CL:0002535!2.49e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.10e-59;10!CL:1000494;1.10e-59;10!CL:0002681;5.59e-50;12!CL:0002584;5.59e-50;12!CL:1000449;2.90e-40;15!CL:1000497;1.09e-35;17!CL:0002518;1.09e-35;17!CL:0000239;4.09e-23;3!CL:1000615;4.09e-23;3!CL:0002306;4.09e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.10e-59,10;CL:1000494,1.10e-59,10;CL:0002681,5.59e-50,12;CL:0002584,5.59e-50,12;CL:1000449,2.90e-40,15;CL:1000497,1.09e-35,17;CL:0002518,1.09e-35,17;CL:0000239,4.09e-23,3;CL:1000615,4.09e-23,3;CL:0002306,4.09e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!4.34e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009773!3.17e-54!12;UBERON:0001231!3.17e-54!12;UBERON:0004810!3.17e-54!12;UBERON:0004211!1.04e-40!16;UBERON:0001285!1.04e-40!16;UBERON:0007684!1.04e-40!16;UBERON:0003220!1.04e-40!16;UBERON:0004208!1.04e-40!16;UBERON:0006555!2.55e-38!17;UBERON:0005103!2.55e-38!17;UBERON:0000083!2.55e-38!17;UBERON:0009201!2.55e-38!17;UBERON:0004819!2.55e-38!17;UBERON:0006553!2.55e-38!17;UBERON:0003074!2.55e-38!17;UBERON:0003060!2.55e-38!17;UBERON:0000080!3.39e-36!18;UBERON:0002120!3.39e-36!18;UBERON:0004875!3.39e-36!18;UBERON:0005721!3.39e-36!18;UBERON:0005754!3.39e-36!18;UBERON:0007297!3.39e-36!18;UBERON:0004876!1.38e-32!20;UBERON:0003887!4.89e-31!21;UBERON:0000489!1.88e-27!32;UBERON:0006853!2.99e-25!3;UBERON:0007685!2.99e-25!3;UBERON:0004134!2.99e-25!3;UBERON:0000058!4.47e-25!26;UBERON:0002113!3.79e-24!27;UBERON:0003918!3.79e-24!27;UBERON:0005095!3.79e-24!27;UBERON:0007687!3.79e-24!27;UBERON:0003064!1.01e-23!37;UBERON:0001225!7.26e-23!13;UBERON:0008987!7.26e-23!13;UBERON:0006554!6.47e-20!44;UBERON:0001008!1.81e-19!45;UBERON:0002372!5.62e-19!1;UBERON:0001961!5.62e-19!1;UBERON:0001744!5.62e-19!1;UBERON:0001735!5.62e-19!1;UBERON:0001851!1.16e-18!16;UBERON:0000353!1.37e-17!17;UBERON:0003886!7.85e-14!63;UBERON:0003103!1.33e-12!69;UBERON:0002553!2.04e-12!70;UBERON:0005172!8.13e-12!55;UBERON:0005173!8.13e-12!55;UBERON:0002417!1.22e-10!61;UBERON:0000916!1.22e-10!61;UBERON:0006955!2.49e-10!2;UBERON:0004801!2.49e-10!2;UBERON:0001255!2.99e-10!2;UBERON:0001556!2.99e-10!2;UBERON:0000464!3.08e-08!104;UBERON:0005177!5.38e-08!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.10e-59;10!UBERON:0009773;1.10e-59;10!UBERON:0001231;1.10e-59;10!UBERON:0004810;1.10e-59;10!UBERON:0001225;5.59e-50;12!UBERON:0008987;5.59e-50;12!UBERON:0001851;2.90e-40;15!UBERON:0006555;2.90e-40;15!UBERON:0000353;2.90e-40;15!UBERON:0004819;2.90e-40;15!UBERON:0001285;2.90e-40;15!UBERON:0007684;2.90e-40;15!UBERON:0002113;1.16e-25;24!UBERON:0011143;1.16e-25;24!UBERON:0006853;4.09e-23;3!UBERON:0007685;4.09e-23;3!UBERON:0004134;4.09e-23;3!UBERON:0000489;1.88e-21;29!UBERON:0006554;8.88e-21;30!UBERON:0001008;8.88e-21;30!UBERON:0005172;1.40e-10;52!UBERON:0005173;1.40e-10;52!UBERON:0005177;3.52e-09;99!UBERON:0002417;2.06e-08;58!UBERON:0000916;2.06e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.10e-59,10;UBERON:0001225,5.59e-50,12;UBERON:0008987,5.59e-50,12;UBERON:0001851,2.90e-40,15;UBERON:0004211,2.90e-40,15;UBERON:0009773,2.90e-40,15;UBERON:0000353,2.90e-40,15;UBERON:0001231,2.90e-40,15;UBERON:0001285,2.90e-40,15;UBERON:0007684,2.90e-40,15;UBERON:0004208,2.90e-40,15;UBERON:0006555,7.83e-38,16;UBERON:0004819,7.83e-38,16;UBERON:0002113,8.76e-24,26;UBERON:0003918,8.76e-24,26;UBERON:0011143,8.76e-24,26;UBERON:0005095,8.76e-24,26;UBERON:0007687,8.76e-24,26;UBERON:0006853,4.09e-23,3;UBERON:0007685,4.09e-23,3;UBERON:0004134,4.09e-23,3;UBERON:0000489,3.79e-20,31;UBERON:0006554,1.10e-13,47;UBERON:0001008,2.00e-13,48;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0003103,8.58e-10,68;UBERON:0005177,6.45e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41439535488894,5.31405826020462,0.784349769176855,0,0.316654886678627,0,0,0,0,0,0,2.03901018436031,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@PLA2G2F | |||
}} |
Revision as of 16:46, 10 January 2014
Short description: | p2@PLA2G2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLA2G2F_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000465062, NM_022819, uc009vpp.1_5end |
EntrezGene: | PLA2G2F |
HGNC: | 30040 |
UniProt: | Q9BZM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.10e-59 | 10 |
nephron tubule epithelial cell | 1.10e-59 | 10 |
kidney cortical cell | 5.59e-50 | 12 |
renal cortical epithelial cell | 5.59e-50 | 12 |
epithelial cell of nephron | 2.90e-40 | 15 |
kidney cell | 1.09e-35 | 17 |
kidney epithelial cell | 1.09e-35 | 17 |
brush border epithelial cell | 4.09e-23 | 3 |
kidney cortex tubule cell | 4.09e-23 | 3 |
epithelial cell of proximal tubule | 4.09e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.10e-59 | 10 |
cortex of kidney | 5.59e-50 | 12 |
renal parenchyma | 5.59e-50 | 12 |
cortex | 2.90e-40 | 15 |
nephron epithelium | 2.90e-40 | 15 |
renal tubule | 2.90e-40 | 15 |
parenchyma | 2.90e-40 | 15 |
nephron tubule | 2.90e-40 | 15 |
nephron | 2.90e-40 | 15 |
uriniferous tubule | 2.90e-40 | 15 |
nephrogenic mesenchyme | 2.90e-40 | 15 |
excretory tube | 7.83e-38 | 16 |
kidney epithelium | 7.83e-38 | 16 |
kidney | 8.76e-24 | 26 |
kidney mesenchyme | 8.76e-24 | 26 |
upper urinary tract | 8.76e-24 | 26 |
kidney rudiment | 8.76e-24 | 26 |
kidney field | 8.76e-24 | 26 |
renal cortex tubule | 4.09e-23 | 3 |
region of nephron tubule | 4.09e-23 | 3 |
proximal tubule | 4.09e-23 | 3 |
cavitated compound organ | 3.79e-20 | 31 |
urinary system structure | 1.10e-13 | 47 |
renal system | 2.00e-13 | 48 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
compound organ | 8.58e-10 | 68 |
trunk region element | 6.45e-07 | 101 |