FFCP PHASE1:Hg19::chr1:20465805..20465824,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64600 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30040 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BZM2 | |||
|association_with_transcript=0bp_to_ENST00000375102,ENST00000465062,NM_022819,uc009vpp.1_5end | |||
|description=CAGE_peak_1_at_PLA2G2F_5end | |||
|id=chr1:20465805..20465824,+ | |||
|ontology_enrichment_celltype=CL:1000507!1.25e-15!12;CL:1000494!1.25e-15!12;CL:1000449!2.59e-11!16;CL:0000239!5.31e-10!3;CL:1000615!5.31e-10!3;CL:0002306!5.31e-10!3;CL:1000497!7.06e-10!18;CL:0002518!7.06e-10!18;CL:0000453!2.46e-09!5;CL:0001014!5.54e-07!2;CL:0001016!5.54e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000507;1.93e-38;10!CL:1000494;1.93e-38;10!CL:1000449;2.16e-25;15!CL:1000497;2.57e-22;17!CL:0002518;2.57e-22;17!CL:0000239;9.78e-12;3!CL:1000615;9.78e-12;3!CL:0002306;9.78e-12;3!CL:0002681;5.28e-11;12!CL:0002584;5.28e-11;12!CL:0000622;6.56e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.88e-38,10;CL:1000494,1.88e-38,10;CL:1000449,2.13e-25,15;CL:1000497,2.53e-22,17;CL:0002518,2.53e-22,17;CL:0000239,9.78e-12,3;CL:1000615,9.78e-12,3;CL:0002306,9.78e-12,3;CL:0002681,5.29e-11,12;CL:0002584,5.29e-11,12;CL:0000622,6.97e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.85e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;7.85e-09;1!DOID:3149;7.85e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,7.27e-09,1;DOID:3149,7.27e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0001008!1.67e-16!45;UBERON:0009773!1.25e-15!12;UBERON:0001231!1.25e-15!12;UBERON:0004810!1.25e-15!12;UBERON:0006554!5.99e-15!44;UBERON:0000489!1.27e-12!32;UBERON:0004211!2.59e-11!16;UBERON:0001285!2.59e-11!16;UBERON:0007684!2.59e-11!16;UBERON:0003220!2.59e-11!16;UBERON:0004208!2.59e-11!16;UBERON:0002113!3.53e-11!27;UBERON:0003918!3.53e-11!27;UBERON:0005095!3.53e-11!27;UBERON:0007687!3.53e-11!27;UBERON:0003064!1.19e-10!37;UBERON:0006555!1.49e-10!17;UBERON:0005103!1.49e-10!17;UBERON:0000083!1.49e-10!17;UBERON:0009201!1.49e-10!17;UBERON:0004819!1.49e-10!17;UBERON:0006553!1.49e-10!17;UBERON:0003074!1.49e-10!17;UBERON:0003060!1.49e-10!17;UBERON:0006853!5.31e-10!3;UBERON:0007685!5.31e-10!3;UBERON:0004134!5.31e-10!3;UBERON:0000080!7.06e-10!18;UBERON:0002120!7.06e-10!18;UBERON:0004875!7.06e-10!18;UBERON:0005721!7.06e-10!18;UBERON:0005754!7.06e-10!18;UBERON:0007297!7.06e-10!18;UBERON:0000161!4.65e-09!35;UBERON:0004876!9.89e-09!20;UBERON:0003887!3.06e-08!21;UBERON:0000058!6.16e-08!26;UBERON:0001042!2.97e-07!10;UBERON:0009145!2.97e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.93e-38;10!UBERON:0009773;1.93e-38;10!UBERON:0001231;1.93e-38;10!UBERON:0004810;1.93e-38;10!UBERON:0006555;2.16e-25;15!UBERON:0004819;2.16e-25;15!UBERON:0001285;2.16e-25;15!UBERON:0007684;2.16e-25;15!UBERON:0006554;7.34e-16;30!UBERON:0001008;7.34e-16;30!UBERON:0002113;1.40e-15;24!UBERON:0011143;1.40e-15;24!UBERON:0000489;9.39e-13;29!UBERON:0006853;9.78e-12;3!UBERON:0007685;9.78e-12;3!UBERON:0004134;9.78e-12;3!UBERON:0001225;5.28e-11;12!UBERON:0008987;5.28e-11;12!UBERON:0007029;2.31e-09;1!UBERON:0002372;2.93e-09;1!UBERON:0001961;2.93e-09;1!UBERON:0001744;2.93e-09;1!UBERON:0001042;2.93e-09;1!UBERON:0001735;2.93e-09;1!UBERON:0000996;7.85e-09;1!UBERON:0001851;7.97e-09;15!UBERON:0000353;7.97e-09;15!UBERON:0000014;1.09e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,1.88e-38,10;UBERON:0004211,2.13e-25,15;UBERON:0009773,2.13e-25,15;UBERON:0001231,2.13e-25,15;UBERON:0001285,2.13e-25,15;UBERON:0007684,2.13e-25,15;UBERON:0004208,2.13e-25,15;UBERON:0006555,9.15e-24,16;UBERON:0004819,9.15e-24,16;UBERON:0001008,7.65e-18,48;UBERON:0006554,4.11e-15,47;UBERON:0002113,2.53e-14,26;UBERON:0003918,2.53e-14,26;UBERON:0011143,2.53e-14,26;UBERON:0005095,2.53e-14,26;UBERON:0007687,2.53e-14,26;UBERON:0000489,7.00e-12,31;UBERON:0006853,9.78e-12,3;UBERON:0007685,9.78e-12,3;UBERON:0004134,9.78e-12,3;UBERON:0001225,5.29e-11,12;UBERON:0008987,5.29e-11,12;UBERON:0007029,2.40e-09,1;UBERON:0002372,2.82e-09,1;UBERON:0001961,2.82e-09,1;UBERON:0001744,2.82e-09,1;UBERON:0001735,2.82e-09,1;UBERON:0001851,7.97e-09,15;UBERON:0000353,7.97e-09,15;UBERON:0000996,8.49e-09,1;UBERON:0000014,1.07e-08,4;UBERON:0001042,1.57e-07,10;UBERON:0009145,1.57e-07,10;UBERON:0000161,3.80e-07,36;UBERON:0006562,6.92e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.309868802321207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.3279748389818,14.863960061152,3.92174884588428,4.38417673959782,3.0609972378934,0,0,0,0,0,0,12.998689925297,5.81753206250107,0.895499018888713,0,0,0,0,0,0.103041011647722,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,1.29151611801369,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8714054040822,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,1.25481369850743,0,0,0.23056390438806,1.70539524378567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.449947783103001,3.0952078182318,0.0607495566580247,1.67717343799633,0.315222829196793,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0.163565394255844,0,0,0,0.999936979274649,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68534503309014,0,0,0,0,0,0.111231401892069,2.98273752831953,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,2.35560560676583,0,0,0,0,4.37139893753226,0,0,0,0,0,0,0.0771741581079447,0,0,2.45148321753905,0,0,0,0,0,0,0,0,0,2.82315897372553,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0.904244737704086,1.73809200028402,0,0,0,2.61260097476354,0.342233301085281,3.56965880977314,0,0,0.0814032686109745,0,0,0,0,0,0,1.33151354837103,0.402547587182052,0 | |||
|short_description=p1@PLA2G2F | |||
}} |
Revision as of 16:46, 10 January 2014
Short description: | p1@PLA2G2F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLA2G2F_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375102, ENST00000465062, NM_022819, uc009vpp.1_5end |
EntrezGene: | PLA2G2F |
HGNC: | 30040 |
UniProt: | Q9BZM2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.88e-38 | 10 |
nephron tubule epithelial cell | 1.88e-38 | 10 |
epithelial cell of nephron | 2.13e-25 | 15 |
kidney cell | 2.53e-22 | 17 |
kidney epithelial cell | 2.53e-22 | 17 |
brush border epithelial cell | 9.78e-12 | 3 |
kidney cortex tubule cell | 9.78e-12 | 3 |
epithelial cell of proximal tubule | 9.78e-12 | 3 |
kidney cortical cell | 5.29e-11 | 12 |
renal cortical epithelial cell | 5.29e-11 | 12 |
acinar cell | 6.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 1.88e-38 | 10 |
nephron epithelium | 2.13e-25 | 15 |
renal tubule | 2.13e-25 | 15 |
nephron tubule | 2.13e-25 | 15 |
nephron | 2.13e-25 | 15 |
uriniferous tubule | 2.13e-25 | 15 |
nephrogenic mesenchyme | 2.13e-25 | 15 |
excretory tube | 9.15e-24 | 16 |
kidney epithelium | 9.15e-24 | 16 |
renal system | 7.65e-18 | 48 |
urinary system structure | 4.11e-15 | 47 |
kidney | 2.53e-14 | 26 |
kidney mesenchyme | 2.53e-14 | 26 |
upper urinary tract | 2.53e-14 | 26 |
kidney rudiment | 2.53e-14 | 26 |
kidney field | 2.53e-14 | 26 |
cavitated compound organ | 7.00e-12 | 31 |
renal cortex tubule | 9.78e-12 | 3 |
region of nephron tubule | 9.78e-12 | 3 |
proximal tubule | 9.78e-12 | 3 |
cortex of kidney | 5.29e-11 | 12 |
renal parenchyma | 5.29e-11 | 12 |
surface | 2.40e-09 | 1 |
tonsil | 2.82e-09 | 1 |
mucosa-associated lymphoid tissue | 2.82e-09 | 1 |
lymphoid tissue | 2.82e-09 | 1 |
tonsillar ring | 2.82e-09 | 1 |
cortex | 7.97e-09 | 15 |
parenchyma | 7.97e-09 | 15 |
vagina | 8.49e-09 | 1 |
zone of skin | 1.07e-08 | 4 |
chordate pharynx | 1.57e-07 | 10 |
pharyngeal region of foregut | 1.57e-07 | 10 |
orifice | 3.80e-07 | 36 |
pharynx | 6.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 7.27e-09 | 1 |
keratoacanthoma | 7.27e-09 | 1 |