FFCP PHASE1:Mm9::chr6:41091296..41091306,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=508|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:41091296..41091306,+|id=chr6:41091296..41091306,+|ontology_enrichment_celltype=CL:0000791!3.77e-31!9;CL:0000789!3.77e-31!9;CL:0002420!3.77e-31!9;CL:0002419!3.77e-31!9;CL:0000790!3.77e-31!9;CL:0000624!5.19e-28!8;CL:0000084!3.07e-25!11;CL:0000827!3.07e-25!11;CL:0000838!5.07e-23!12;CL:0000893!1.35e-21!6;CL:0002489!1.35e-21!6;CL:0000898!1.35e-21!6;CL:0000809!1.35e-21!6;CL:0000810!1.35e-21!6;CL:0000895!1.35e-21!6;CL:0000808!1.35e-21!6;CL:0000894!1.35e-21!6;CL:0000806!1.35e-21!6;CL:0000807!1.35e-21!6;CL:0000805!1.35e-21!6;CL:0002425!1.35e-21!6;CL:0002436!1.35e-21!6;CL:0002427!1.35e-21!6;CL:0002428!1.35e-21!6;CL:0002429!1.35e-21!6;CL:0002433!1.35e-21!6;CL:0002431!1.35e-21!6;CL:0002432!1.35e-21!6;CL:0000542!3.82e-21!13;CL:0000051!3.82e-21!13;CL:0000738!7.72e-16!17;CL:0002087!7.72e-16!17;CL:0002031!2.58e-10!25;CL:0000988!9.52e-08!32;CL:0002032!9.52e-08!32;CL:0000037!9.52e-08!32;CL:0000566!9.52e-08!32;CL:0000837!9.52e-08!32|ontology_enrichment_celltype_v019_2=CL:0000893,5.34e-07,6;CL:0002489,5.34e-07,6;CL:0000898,5.34e-07,6;CL:0000809,5.34e-07,6;CL:0000810,5.34e-07,6;CL:0000895,5.34e-07,6;CL:0000808,5.34e-07,6;CL:0000894,5.34e-07,6;CL:0000806,5.34e-07,6;CL:0000807,5.34e-07,6;CL:0000805,5.34e-07,6;CL:0002425,5.34e-07,6;CL:0002436,5.34e-07,6;CL:0002427,5.34e-07,6;CL:0002428,5.34e-07,6;CL:0002429,5.34e-07,6;CL:0002433,5.34e-07,6;CL:0002431,5.34e-07,6;CL:0002432,5.34e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!1.81e-54!23;UBERON:0000974!1.81e-54!23;UBERON:0004807!1.81e-54!23;UBERON:0005058!1.81e-54!23;UBERON:0003351!1.81e-54!23;UBERON:0009113!1.81e-54!23;UBERON:0003295!1.81e-54!23;UBERON:0009722!1.81e-54!23;UBERON:0005562!1.81e-54!23;UBERON:0007690!1.81e-54!23;UBERON:0006562!4.65e-52!24;UBERON:0003408!4.65e-52!24;UBERON:0001557!4.65e-52!24;UBERON:0001042!4.65e-52!24;UBERON:0008814!4.65e-52!24;UBERON:0009145!4.65e-52!24;UBERON:0000072!6.69e-46!27;UBERON:0004177!1.68e-42!29;UBERON:0000063!1.25e-34!35;UBERON:0000065!4.68e-29!41;UBERON:0001004!2.78e-28!42;UBERON:0002390!3.65e-26!45;UBERON:0003061!3.65e-26!45;UBERON:0002193!2.60e-24!48;UBERON:0005057!1.13e-22!51;UBERON:0003929!9.07e-21!55;UBERON:0002368!9.62e-19!60;UBERON:0002530!5.00e-17!65;UBERON:0000490!1.02e-16!66;UBERON:0005911!7.81e-16!69;UBERON:0002405!1.48e-15!70;UBERON:0000949!5.03e-15!72;UBERON:0003081!1.35e-14!88;UBERON:0007811!5.41e-12!86;UBERON:0001041!5.65e-11!92;UBERON:0000153!1.16e-10!94;UBERON:0000077!3.20e-10!97;UBERON:0000064!6.09e-10!99;UBERON:0001048!3.62e-07!147;UBERON:0004921!4.99e-07!126;UBERON:0004185!4.99e-07!126;UBERON:0001007!7.33e-07!128;UBERON:0001555!7.33e-07!128;UBERON:0007026!7.33e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.39e-37,23;UBERON:0000974,1.39e-37,23;UBERON:0004807,1.39e-37,23;UBERON:0005058,1.39e-37,23;UBERON:0003351,1.39e-37,23;UBERON:0009113,1.39e-37,23;UBERON:0003295,1.39e-37,23;UBERON:0009722,1.39e-37,23;UBERON:0005562,1.39e-37,23;UBERON:0007690,1.39e-37,23;UBERON:0006562,5.24e-36,24;UBERON:0003408,5.24e-36,24;UBERON:0001557,5.24e-36,24;UBERON:0001042,5.24e-36,24;UBERON:0008814,5.24e-36,24;UBERON:0009145,5.24e-36,24;UBERON:0000072,5.59e-32,27;UBERON:0004177,9.35e-30,29;UBERON:0005057,9.35e-30,29;UBERON:0000077,1.33e-24,35;UBERON:0007811,6.53e-24,36;UBERON:0000065,5.93e-21,41;UBERON:0001004,1.91e-20,42;UBERON:0000153,5.82e-20,43;UBERON:0002390,4.66e-19,45;UBERON:0003061,4.66e-19,45;UBERON:0002193,7.66e-18,48;UBERON:0002405,7.66e-18,48;UBERON:0003929,1.62e-15,55;UBERON:0002368,3.46e-14,60;UBERON:0002530,4.65e-13,65;UBERON:0000490,7.46e-13,66;UBERON:0005911,2.84e-12,69;UBERON:0000949,9.68e-12,72;UBERON:0001041,1.63e-10,80;UBERON:0003081,1.27e-09,87;UBERON:0004921,3.40e-07,114;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,5.91312633037,1.87251621057595,0.68487187290202,0.239316476986009,0.856003649656029,0.262261207256992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.389762468933385,0.179026695667481,0.79472541912506,1.56254084375959,1.62458479892035,1.9183625490148,1.21930890648,1.61321896218945,1.75424185331554,1.6356013078856,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:41091296..41091306,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=508 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:41091296..41091306,+ | |||
|id=chr6:41091296..41091306,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.77e-31!9;CL:0000789!3.77e-31!9;CL:0002420!3.77e-31!9;CL:0002419!3.77e-31!9;CL:0000790!3.77e-31!9;CL:0000624!5.19e-28!8;CL:0000084!3.07e-25!11;CL:0000827!3.07e-25!11;CL:0000838!5.07e-23!12;CL:0000893!1.35e-21!6;CL:0002489!1.35e-21!6;CL:0000898!1.35e-21!6;CL:0000809!1.35e-21!6;CL:0000810!1.35e-21!6;CL:0000895!1.35e-21!6;CL:0000808!1.35e-21!6;CL:0000894!1.35e-21!6;CL:0000806!1.35e-21!6;CL:0000807!1.35e-21!6;CL:0000805!1.35e-21!6;CL:0002425!1.35e-21!6;CL:0002436!1.35e-21!6;CL:0002427!1.35e-21!6;CL:0002428!1.35e-21!6;CL:0002429!1.35e-21!6;CL:0002433!1.35e-21!6;CL:0002431!1.35e-21!6;CL:0002432!1.35e-21!6;CL:0000542!3.82e-21!13;CL:0000051!3.82e-21!13;CL:0000738!7.72e-16!17;CL:0002087!7.72e-16!17;CL:0002031!2.58e-10!25;CL:0000988!9.52e-08!32;CL:0002032!9.52e-08!32;CL:0000037!9.52e-08!32;CL:0000566!9.52e-08!32;CL:0000837!9.52e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,5.34e-07,6;CL:0002489,5.34e-07,6;CL:0000898,5.34e-07,6;CL:0000809,5.34e-07,6;CL:0000810,5.34e-07,6;CL:0000895,5.34e-07,6;CL:0000808,5.34e-07,6;CL:0000894,5.34e-07,6;CL:0000806,5.34e-07,6;CL:0000807,5.34e-07,6;CL:0000805,5.34e-07,6;CL:0002425,5.34e-07,6;CL:0002436,5.34e-07,6;CL:0002427,5.34e-07,6;CL:0002428,5.34e-07,6;CL:0002429,5.34e-07,6;CL:0002433,5.34e-07,6;CL:0002431,5.34e-07,6;CL:0002432,5.34e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.81e-54!23;UBERON:0000974!1.81e-54!23;UBERON:0004807!1.81e-54!23;UBERON:0005058!1.81e-54!23;UBERON:0003351!1.81e-54!23;UBERON:0009113!1.81e-54!23;UBERON:0003295!1.81e-54!23;UBERON:0009722!1.81e-54!23;UBERON:0005562!1.81e-54!23;UBERON:0007690!1.81e-54!23;UBERON:0006562!4.65e-52!24;UBERON:0003408!4.65e-52!24;UBERON:0001557!4.65e-52!24;UBERON:0001042!4.65e-52!24;UBERON:0008814!4.65e-52!24;UBERON:0009145!4.65e-52!24;UBERON:0000072!6.69e-46!27;UBERON:0004177!1.68e-42!29;UBERON:0000063!1.25e-34!35;UBERON:0000065!4.68e-29!41;UBERON:0001004!2.78e-28!42;UBERON:0002390!3.65e-26!45;UBERON:0003061!3.65e-26!45;UBERON:0002193!2.60e-24!48;UBERON:0005057!1.13e-22!51;UBERON:0003929!9.07e-21!55;UBERON:0002368!9.62e-19!60;UBERON:0002530!5.00e-17!65;UBERON:0000490!1.02e-16!66;UBERON:0005911!7.81e-16!69;UBERON:0002405!1.48e-15!70;UBERON:0000949!5.03e-15!72;UBERON:0003081!1.35e-14!88;UBERON:0007811!5.41e-12!86;UBERON:0001041!5.65e-11!92;UBERON:0000153!1.16e-10!94;UBERON:0000077!3.20e-10!97;UBERON:0000064!6.09e-10!99;UBERON:0001048!3.62e-07!147;UBERON:0004921!4.99e-07!126;UBERON:0004185!4.99e-07!126;UBERON:0001007!7.33e-07!128;UBERON:0001555!7.33e-07!128;UBERON:0007026!7.33e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.39e-37,23;UBERON:0000974,1.39e-37,23;UBERON:0004807,1.39e-37,23;UBERON:0005058,1.39e-37,23;UBERON:0003351,1.39e-37,23;UBERON:0009113,1.39e-37,23;UBERON:0003295,1.39e-37,23;UBERON:0009722,1.39e-37,23;UBERON:0005562,1.39e-37,23;UBERON:0007690,1.39e-37,23;UBERON:0006562,5.24e-36,24;UBERON:0003408,5.24e-36,24;UBERON:0001557,5.24e-36,24;UBERON:0001042,5.24e-36,24;UBERON:0008814,5.24e-36,24;UBERON:0009145,5.24e-36,24;UBERON:0000072,5.59e-32,27;UBERON:0004177,9.35e-30,29;UBERON:0005057,9.35e-30,29;UBERON:0000077,1.33e-24,35;UBERON:0007811,6.53e-24,36;UBERON:0000065,5.93e-21,41;UBERON:0001004,1.91e-20,42;UBERON:0000153,5.82e-20,43;UBERON:0002390,4.66e-19,45;UBERON:0003061,4.66e-19,45;UBERON:0002193,7.66e-18,48;UBERON:0002405,7.66e-18,48;UBERON:0003929,1.62e-15,55;UBERON:0002368,3.46e-14,60;UBERON:0002530,4.65e-13,65;UBERON:0000490,7.46e-13,66;UBERON:0005911,2.84e-12,69;UBERON:0000949,9.68e-12,72;UBERON:0001041,1.63e-10,80;UBERON:0003081,1.27e-09,87;UBERON:0004921,3.40e-07,114;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,5.91312633037,1.87251621057595,0.68487187290202,0.239316476986009,0.856003649656029,0.262261207256992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26404448251271,0,0.102710957164827,0.389762468933385,0.179026695667481,0.79472541912506,1.56254084375959,1.62458479892035,1.9183625490148,1.21930890648,1.61321896218945,1.75424185331554,1.6356013078856,0.818138315270983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:41091296..41091306,+ | |||
}} |
Revision as of 09:52, 14 September 2013
Short description: | p@chr6:41091296..41091306, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:41091296..41091306, + |
Coexpression cluster: | MCL_coexpression_mm9:508 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 5.34e-07 | 6 |
double negative thymocyte | 5.34e-07 | 6 |
naive T cell | 5.34e-07 | 6 |
double-positive, alpha-beta thymocyte | 5.34e-07 | 6 |
CD4-positive, alpha-beta thymocyte | 5.34e-07 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.34e-07 | 6 |
DN4 thymocyte | 5.34e-07 | 6 |
DN1 thymic pro-T cell | 5.34e-07 | 6 |
DN2 thymocyte | 5.34e-07 | 6 |
DN3 thymocyte | 5.34e-07 | 6 |
immature single positive thymocyte | 5.34e-07 | 6 |
early T lineage precursor | 5.34e-07 | 6 |
mature CD4 single-positive thymocyte | 5.34e-07 | 6 |
resting double-positive thymocyte | 5.34e-07 | 6 |
double-positive blast | 5.34e-07 | 6 |
CD69-positive double-positive thymocyte | 5.34e-07 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 5.34e-07 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.34e-07 | 6 |
CD24-positive, CD4 single-positive thymocyte | 5.34e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.