FFCP PHASE1:Mm9::chr6:145070247..145070268,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16970|HGNC=|MCL_coexpression_id=36|UniProt=G5E880,Q3TVR1,Q3V3H7,Q3U583|association_with_transcript=0bp_to_ENSMUST00000032396,ENSMUST00000149244,NM_008511,uc009eqx.2,uc009eqy.2,uc009eqz.2_5end|description=CAGE_peak_3_at_Lrmp_5end|id=chr6:145070247..145070268,+|ontology_enrichment_celltype=CL:0000988!1.64e-11!32;CL:0002032!1.64e-11!32;CL:0000037!1.64e-11!32;CL:0000566!1.64e-11!32;CL:0000837!1.64e-11!32;CL:0002031!8.96e-10!25;CL:0000838!5.85e-08!12;CL:0002320!2.41e-07!46;CL:0000134!2.41e-07!46;CL:0000084!3.11e-07!11;CL:0000827!3.11e-07!11;CL:0000542!7.58e-07!13;CL:0000051!7.58e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,6.48e-18,32;CL:0002032,6.48e-18,32;CL:0000037,6.48e-18,32;CL:0000837,6.48e-18,32;CL:0002031,1.67e-14,25;CL:0002320,1.09e-12,46;CL:0000134,1.09e-12,46;CL:0000838,3.90e-12,12;CL:0000084,6.10e-11,11;CL:0000827,6.10e-11,11;CL:0000542,6.43e-11,13;CL:0000051,6.43e-11,13;CL:0000219,1.62e-09,54;CL:0000791,8.02e-09,9;CL:0000789,8.02e-09,9;CL:0002420,8.02e-09,9;CL:0002419,8.02e-09,9;CL:0000790,8.02e-09,9;CL:0000738,1.07e-08,17;CL:0002087,1.07e-08,17;CL:0000049,1.60e-08,19;CL:0000624,4.92e-08,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.18e-17!70;UBERON:0002193!5.25e-17!48;UBERON:0002390!1.23e-15!45;UBERON:0003061!1.23e-15!45;UBERON:0005057!1.08e-11!51;UBERON:0004177!2.06e-11!29;UBERON:0003081!3.47e-10!88;UBERON:0001041!1.59e-09!92;UBERON:0002370!6.82e-09!23;UBERON:0000974!6.82e-09!23;UBERON:0004807!6.82e-09!23;UBERON:0005058!6.82e-09!23;UBERON:0003351!6.82e-09!23;UBERON:0009113!6.82e-09!23;UBERON:0003295!6.82e-09!23;UBERON:0009722!6.82e-09!23;UBERON:0005562!6.82e-09!23;UBERON:0007690!6.82e-09!23;UBERON:0006562!1.16e-08!24;UBERON:0001557!1.16e-08!24;UBERON:0001042!1.16e-08!24;UBERON:0008814!1.16e-08!24;UBERON:0009145!1.16e-08!24;UBERON:0000077!2.28e-08!97;UBERON:0003408!4.38e-08!24;UBERON:0000926!2.11e-07!193;UBERON:0004120!2.11e-07!193;UBERON:0006603!2.11e-07!193;UBERON:0003104!2.29e-07!131;UBERON:0009142!2.29e-07!131;UBERON:0002384!2.41e-07!46;UBERON:0000949!5.00e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.48e-25,48;UBERON:0002405,4.48e-25,48;UBERON:0002390,7.61e-23,45;UBERON:0003061,7.61e-23,45;UBERON:0004177,1.47e-19,29;UBERON:0005057,1.47e-19,29;UBERON:0000077,7.37e-16,35;UBERON:0002370,2.41e-15,23;UBERON:0000974,2.41e-15,23;UBERON:0004807,2.41e-15,23;UBERON:0005058,2.41e-15,23;UBERON:0003351,2.41e-15,23;UBERON:0009113,2.41e-15,23;UBERON:0003295,2.41e-15,23;UBERON:0009722,2.41e-15,23;UBERON:0005562,2.41e-15,23;UBERON:0007690,2.41e-15,23;UBERON:0006562,1.99e-14,24;UBERON:0003408,1.99e-14,24;UBERON:0001557,1.99e-14,24;UBERON:0001042,1.99e-14,24;UBERON:0008814,1.99e-14,24;UBERON:0009145,1.99e-14,24;UBERON:0002384,1.09e-12,46;UBERON:0000072,4.17e-12,27;UBERON:0003081,1.80e-11,87;UBERON:0000949,9.01e-11,72;UBERON:0000490,2.49e-10,66;UBERON:0003929,5.32e-10,55;UBERON:0001041,1.13e-09,80;UBERON:0002368,1.89e-08,60;UBERON:0000065,3.43e-08,41;UBERON:0005911,4.30e-08,69;UBERON:0001004,7.66e-08,42;UBERON:0002530,8.64e-08,65;UBERON:0007811,1.42e-07,36;UBERON:0000926,4.51e-07,120;UBERON:0004120,4.51e-07,120;UBERON:0006603,4.51e-07,120;UBERON:0002204,7.13e-07,32|phase1_expression=0,0,0,0,0,0,0,11.2337291394171,2.25261955442667,2.10658073689794,5.30775701499065,1.35612670292072,7.19043065711064,8.30493822980475,4.33042690360362,3.44207954562704,0.699561878128147,16.5617636813075,12.8887567589394,8.91218268775863,0.510259740906419,7.64540324246817,11.4927907221132,1.43993180514066,1.60586496747019,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,8.89042942843484,11.0711661765223,0,0,0,0,9.62622750694888,11.720030167857,14.6586648312664,11.1763982725893,16.3930916390027,14.0798002379035,0,0,0,0,0,0,0,0.139986421625363,0,14.2615215149076,10.1550699881588,4.36921938885203,0,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0,0,0.899899717281399,0.988866362566974,2.8419204597844,0.599200221036809,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,1.15945795480671,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,11.9111426477699,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0.722996784599558,5.30766331169925,1.29413479957927,8.17113618303456,7.75800405016355,0,0,0.209446706813455,0.255457055208591,3.35482348616577,2.39961092397363,3.93917703926501,0,0,0,0,0.255715457330331,0,0.162241263067758,0.305518091550949,5.84712761867437,0.252722758433675,0,0,0,0.180062129805349,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,2.1066395619397,3.08817488537658,3.40996199274711,0,0,0,0.473489471170421,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.493679549740441,0,0.324275238183423,0.584799949701329,0.219550115291051,0,0,0,0.991256348951394,0,0,0,0,0,0.222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| ||
|EntrezGene=16970 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=G5E880,Q3TVR1,Q3V3H7,Q3U583 | |||
|association_with_transcript=0bp_to_ENSMUST00000032396,ENSMUST00000149244,NM_008511,uc009eqx.2,uc009eqy.2,uc009eqz.2_5end | |||
|description=CAGE_peak_3_at_Lrmp_5end | |||
|id=chr6:145070247..145070268,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.64e-11!32;CL:0002032!1.64e-11!32;CL:0000037!1.64e-11!32;CL:0000566!1.64e-11!32;CL:0000837!1.64e-11!32;CL:0002031!8.96e-10!25;CL:0000838!5.85e-08!12;CL:0002320!2.41e-07!46;CL:0000134!2.41e-07!46;CL:0000084!3.11e-07!11;CL:0000827!3.11e-07!11;CL:0000542!7.58e-07!13;CL:0000051!7.58e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.48e-18,32;CL:0002032,6.48e-18,32;CL:0000037,6.48e-18,32;CL:0000837,6.48e-18,32;CL:0002031,1.67e-14,25;CL:0002320,1.09e-12,46;CL:0000134,1.09e-12,46;CL:0000838,3.90e-12,12;CL:0000084,6.10e-11,11;CL:0000827,6.10e-11,11;CL:0000542,6.43e-11,13;CL:0000051,6.43e-11,13;CL:0000219,1.62e-09,54;CL:0000791,8.02e-09,9;CL:0000789,8.02e-09,9;CL:0002420,8.02e-09,9;CL:0002419,8.02e-09,9;CL:0000790,8.02e-09,9;CL:0000738,1.07e-08,17;CL:0002087,1.07e-08,17;CL:0000049,1.60e-08,19;CL:0000624,4.92e-08,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.18e-17!70;UBERON:0002193!5.25e-17!48;UBERON:0002390!1.23e-15!45;UBERON:0003061!1.23e-15!45;UBERON:0005057!1.08e-11!51;UBERON:0004177!2.06e-11!29;UBERON:0003081!3.47e-10!88;UBERON:0001041!1.59e-09!92;UBERON:0002370!6.82e-09!23;UBERON:0000974!6.82e-09!23;UBERON:0004807!6.82e-09!23;UBERON:0005058!6.82e-09!23;UBERON:0003351!6.82e-09!23;UBERON:0009113!6.82e-09!23;UBERON:0003295!6.82e-09!23;UBERON:0009722!6.82e-09!23;UBERON:0005562!6.82e-09!23;UBERON:0007690!6.82e-09!23;UBERON:0006562!1.16e-08!24;UBERON:0001557!1.16e-08!24;UBERON:0001042!1.16e-08!24;UBERON:0008814!1.16e-08!24;UBERON:0009145!1.16e-08!24;UBERON:0000077!2.28e-08!97;UBERON:0003408!4.38e-08!24;UBERON:0000926!2.11e-07!193;UBERON:0004120!2.11e-07!193;UBERON:0006603!2.11e-07!193;UBERON:0003104!2.29e-07!131;UBERON:0009142!2.29e-07!131;UBERON:0002384!2.41e-07!46;UBERON:0000949!5.00e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.48e-25,48;UBERON:0002405,4.48e-25,48;UBERON:0002390,7.61e-23,45;UBERON:0003061,7.61e-23,45;UBERON:0004177,1.47e-19,29;UBERON:0005057,1.47e-19,29;UBERON:0000077,7.37e-16,35;UBERON:0002370,2.41e-15,23;UBERON:0000974,2.41e-15,23;UBERON:0004807,2.41e-15,23;UBERON:0005058,2.41e-15,23;UBERON:0003351,2.41e-15,23;UBERON:0009113,2.41e-15,23;UBERON:0003295,2.41e-15,23;UBERON:0009722,2.41e-15,23;UBERON:0005562,2.41e-15,23;UBERON:0007690,2.41e-15,23;UBERON:0006562,1.99e-14,24;UBERON:0003408,1.99e-14,24;UBERON:0001557,1.99e-14,24;UBERON:0001042,1.99e-14,24;UBERON:0008814,1.99e-14,24;UBERON:0009145,1.99e-14,24;UBERON:0002384,1.09e-12,46;UBERON:0000072,4.17e-12,27;UBERON:0003081,1.80e-11,87;UBERON:0000949,9.01e-11,72;UBERON:0000490,2.49e-10,66;UBERON:0003929,5.32e-10,55;UBERON:0001041,1.13e-09,80;UBERON:0002368,1.89e-08,60;UBERON:0000065,3.43e-08,41;UBERON:0005911,4.30e-08,69;UBERON:0001004,7.66e-08,42;UBERON:0002530,8.64e-08,65;UBERON:0007811,1.42e-07,36;UBERON:0000926,4.51e-07,120;UBERON:0004120,4.51e-07,120;UBERON:0006603,4.51e-07,120;UBERON:0002204,7.13e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,11.2337291394171,2.25261955442667,2.10658073689794,5.30775701499065,1.35612670292072,7.19043065711064,8.30493822980475,4.33042690360362,3.44207954562704,0.699561878128147,16.5617636813075,12.8887567589394,8.91218268775863,0.510259740906419,7.64540324246817,11.4927907221132,1.43993180514066,1.60586496747019,0,0,0,0.380046838912748,0.504060259519861,0.221730510655305,8.89042942843484,11.0711661765223,0,0,0,0,9.62622750694888,11.720030167857,14.6586648312664,11.1763982725893,16.3930916390027,14.0798002379035,0,0,0,0,0,0,0,0.139986421625363,0,14.2615215149076,10.1550699881588,4.36921938885203,0,0.286533439938757,1.03134418455488,0.202316460859598,0,0,0,0,0.899899717281399,0.988866362566974,2.8419204597844,0.599200221036809,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0.15279824777681,0,0,0,0,0,1.15945795480671,1.72084775396277,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,11.9111426477699,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0,0.722996784599558,5.30766331169925,1.29413479957927,8.17113618303456,7.75800405016355,0,0,0.209446706813455,0.255457055208591,3.35482348616577,2.39961092397363,3.93917703926501,0,0,0,0,0.255715457330331,0,0.162241263067758,0.305518091550949,5.84712761867437,0.252722758433675,0,0,0,0.180062129805349,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0,0,0.696504333044333,0.411564272815887,0.199034266818493,2.1066395619397,3.08817488537658,3.40996199274711,0,0,0,0.473489471170421,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0.493679549740441,0,0.324275238183423,0.584799949701329,0.219550115291051,0,0,0,0.991256348951394,0,0,0,0,0,0.22237804384487,0,1.42358718463353,0,0.251335208800269,0,0.38992817423824,0,0,0.398282546508734,0,0,0,0,0,0,0.126473074248515,0.295220295959204,0.156998727841375,0,0.296452627087149,0.83422552858047,1.17935397067922,0.899448449539415,0.811440485554012,2.41177159752417,2.80088436959562,2.30156909960649,3.24270453550071,1.09824565275233,5.75072826109418,2.23284568601102,1.87222603868736,0,0.358794827043824,0,2.03228509183265,0,0.325929952884052,0,0.234690248288502,0.502518772325447,0,0.195133647857799,0,0.44292937929755,0.318909537314974,1.63863314715738,1.72684981865896,0.433947175744535,0,1.63171705145613,0.491764273019036,1.65562047782839,0.481651769963376,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0.404810701674894,0,0,0.321321316421807,0,0.534196811001766,0.325773918707152,0.329940245945071,0,0,0.302323556964751,1.50884063804718,1.18120757152309,1.84461088766356,0.516856586336442,1.09060118843252,2.49548164869305,2.52829406348653,2.10837217149998,2.06271086496374,0,0,0,0,0,0,0.329098041204242,0.304464949114599,0.23467170806371,0,0,0.65954501176592,0.645857706783622,0.361877549568935,0.596861720015682,0.164140899745061,0,0,4.61351378154202,1.23832120777933,2.03713980106683,3.20226376907975,4.37421528707281,3.88922894451088,5.26933132980952,5.03825228365169,7.18639863783004,0,0.158167996790568,0.609958401380546,0.324016022465404,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0,0.117357238645754,0,0.104859344425711,0,0,6.95224465381992,3.24360344464263,3.80030541509861,3.63778304337826,6.44496104402933,7.54989148168807,6.97133607215819,6.64602872285597,8.17828244579996,5.02964923922999,7.4611377001262,7.50425681696094,9.71739600567328,8.88264456579924,0.226730383615211,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.170733605754134,0,0.209613162627982,0,0.222246727801615,0.412070114477788,0.320919209591815,0.505394423527595,0,0,0.37456602987953,0.320125762024346,0.516919220600519,0.476293691283074,0.463537303779422,0.77163688185482,0,0.735994600671987,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.507687647350059,0.548783918618318,0,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0,0.309873682371932,0.964533054905707,0.499621155875892,0.467863216890817,0.214871054048298,0,0.882365676478062,1.62307484934295 | |||
|short_description=p3@Lrmp | |||
}} |
Revision as of 09:21, 14 September 2013
Short description: | p3@Lrmp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lrmp_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000032396, ENSMUST00000149244, NM_008511, uc009eqx.2, uc009eqy.2, uc009eqz.2_5end |
EntrezGene: | Lrmp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.48e-18 | 32 |
hematopoietic oligopotent progenitor cell | 6.48e-18 | 32 |
hematopoietic stem cell | 6.48e-18 | 32 |
hematopoietic multipotent progenitor cell | 6.48e-18 | 32 |
hematopoietic lineage restricted progenitor cell | 1.67e-14 | 25 |
connective tissue cell | 1.09e-12 | 46 |
mesenchymal cell | 1.09e-12 | 46 |
lymphoid lineage restricted progenitor cell | 3.90e-12 | 12 |
T cell | 6.10e-11 | 11 |
pro-T cell | 6.10e-11 | 11 |
lymphocyte | 6.43e-11 | 13 |
common lymphoid progenitor | 6.43e-11 | 13 |
motile cell | 1.62e-09 | 54 |
mature alpha-beta T cell | 8.02e-09 | 9 |
alpha-beta T cell | 8.02e-09 | 9 |
immature T cell | 8.02e-09 | 9 |
mature T cell | 8.02e-09 | 9 |
immature alpha-beta T cell | 8.02e-09 | 9 |
leukocyte | 1.07e-08 | 17 |
nongranular leukocyte | 1.07e-08 | 17 |
common myeloid progenitor | 1.60e-08 | 19 |
CD4-positive, alpha-beta T cell | 4.92e-08 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.