FFCP PHASE1:Hg19::chr7:94953836..94953850,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5444|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9204|TSSclassifier=S|UniProt=P27169|association_with_transcript=33bp_to_NM_000446,uc003uns.2_5end|coexpression_cluster_id=C5|description=CAGE_peak_2_at_PON1_5end|id=chr7:94953836..94953850,-|ontology_enrichment_celltype=CL:0000181!1.32e-17!12;CL:0000417!1.32e-17!12;CL:0000668!1.32e-17!12;CL:0000414!1.32e-17!12;CL:0000412!1.32e-17!12;CL:0000182!1.32e-17!12;CL:0002322!2.60e-08!5|ontology_enrichment_celltype_v019=CL:0000182;2.86e-12;12|ontology_enrichment_celltype_v019_2=CL:0000182,2.86e-12,12|ontology_enrichment_development_v019=UBERON:0006965;8.74e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!7.03e-23!26;UBERON:0002368!3.26e-22!35;UBERON:0002107!5.95e-18!19;UBERON:0006925!5.95e-18!19;UBERON:0008836!5.95e-18!19;UBERON:0000949!1.44e-16!45;UBERON:0007023!3.53e-16!115;UBERON:0002530!1.08e-15!59;UBERON:0008835!2.81e-15!22;UBERON:0003894!2.81e-15!22;UBERON:0009854!1.53e-14!23;UBERON:0007499!3.03e-13!25;UBERON:0009497!3.03e-13!25;UBERON:0000015!3.03e-13!25;UBERON:0002423!3.03e-13!25;UBERON:0006235!3.03e-13!25;UBERON:0004161!3.03e-13!25;UBERON:0003929!4.01e-13!54;UBERON:0009856!1.13e-12!26;UBERON:0005172!5.81e-11!55;UBERON:0005173!5.81e-11!55;UBERON:0002365!2.31e-10!31;UBERON:0002330!2.31e-10!31;UBERON:0002417!1.30e-09!61;UBERON:0000916!1.30e-09!61;UBERON:0005911!1.28e-07!82|ontology_enrichment_uberon_v019=UBERON:0002370;4.36e-31;2!UBERON:0005058;4.36e-31;2!UBERON:0009113;4.36e-31;2!UBERON:0002107;2.15e-20;19!UBERON:0006925;2.15e-20;19!UBERON:0002368;5.69e-19;33!UBERON:0002423;1.60e-15;25!UBERON:0000949;5.12e-14;43!UBERON:0004177;4.52e-13;5!UBERON:0005057;4.52e-13;5!UBERON:0002365;1.65e-12;31!UBERON:0002330;1.65e-12;31!UBERON:0002530;1.90e-08;57|ontology_enrichment_uberon_v019_2=UBERON:0002368,4.66e-21,35;UBERON:0002107,2.15e-20,19;UBERON:0006925,2.15e-20,19;UBERON:0008836,2.15e-20,19;UBERON:0008835,1.25e-17,22;UBERON:0003894,1.25e-17,22;UBERON:0009854,7.26e-17,23;UBERON:0000949,2.69e-16,45;UBERON:0002370,4.51e-16,4;UBERON:0005058,4.51e-16,4;UBERON:0009113,4.51e-16,4;UBERON:0003295,4.51e-16,4;UBERON:0005562,4.51e-16,4;UBERON:0007499,1.60e-15,25;UBERON:0009497,1.60e-15,25;UBERON:0000015,1.60e-15,25;UBERON:0002423,1.60e-15,25;UBERON:0006235,1.60e-15,25;UBERON:0004161,1.60e-15,25;UBERON:0009856,6.29e-15,26;UBERON:0003929,1.64e-13,54;UBERON:0002365,1.58e-12,31;UBERON:0002330,1.58e-12,31;UBERON:0002530,2.49e-12,59;UBERON:0003351,4.84e-11,6;UBERON:0004177,1.35e-09,7;UBERON:0005057,1.35e-09,7;UBERON:0005911,9.75e-09,82;UBERON:0001041,3.32e-08,87;UBERON:0005172,3.52e-07,54;UBERON:0005173,3.52e-07,54;UBERON:0000974,5.59e-07,10;UBERON:0003408,5.59e-07,10;UBERON:0001042,5.59e-07,10;UBERON:0009145,5.59e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,310.549835313486,118.922093217993,129.382989563228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,126.534362303403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,142.533714376044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1451842469678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0.315132729228895,0,0.0674035438541849,0.295282444544246,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,155.345367698767,25.1763088933221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,2.64463213453628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,6.91101335245265,5.71087371521893,0,0.0636471582781649,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0|short_description=p2@PON1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9204 | |||
|TSSclassifier=S | |||
|UniProt=P27169 | |||
|association_with_transcript=33bp_to_NM_000446,uc003uns.2_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_PON1_5end | |||
|id=chr7:94953836..94953850,- | |||
|ontology_enrichment_celltype=CL:0000181!1.32e-17!12;CL:0000417!1.32e-17!12;CL:0000668!1.32e-17!12;CL:0000414!1.32e-17!12;CL:0000412!1.32e-17!12;CL:0000182!1.32e-17!12;CL:0002322!2.60e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.86e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.86e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.74e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.03e-23!26;UBERON:0002368!3.26e-22!35;UBERON:0002107!5.95e-18!19;UBERON:0006925!5.95e-18!19;UBERON:0008836!5.95e-18!19;UBERON:0000949!1.44e-16!45;UBERON:0007023!3.53e-16!115;UBERON:0002530!1.08e-15!59;UBERON:0008835!2.81e-15!22;UBERON:0003894!2.81e-15!22;UBERON:0009854!1.53e-14!23;UBERON:0007499!3.03e-13!25;UBERON:0009497!3.03e-13!25;UBERON:0000015!3.03e-13!25;UBERON:0002423!3.03e-13!25;UBERON:0006235!3.03e-13!25;UBERON:0004161!3.03e-13!25;UBERON:0003929!4.01e-13!54;UBERON:0009856!1.13e-12!26;UBERON:0005172!5.81e-11!55;UBERON:0005173!5.81e-11!55;UBERON:0002365!2.31e-10!31;UBERON:0002330!2.31e-10!31;UBERON:0002417!1.30e-09!61;UBERON:0000916!1.30e-09!61;UBERON:0005911!1.28e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.36e-31;2!UBERON:0005058;4.36e-31;2!UBERON:0009113;4.36e-31;2!UBERON:0002107;2.15e-20;19!UBERON:0006925;2.15e-20;19!UBERON:0002368;5.69e-19;33!UBERON:0002423;1.60e-15;25!UBERON:0000949;5.12e-14;43!UBERON:0004177;4.52e-13;5!UBERON:0005057;4.52e-13;5!UBERON:0002365;1.65e-12;31!UBERON:0002330;1.65e-12;31!UBERON:0002530;1.90e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002368,4.66e-21,35;UBERON:0002107,2.15e-20,19;UBERON:0006925,2.15e-20,19;UBERON:0008836,2.15e-20,19;UBERON:0008835,1.25e-17,22;UBERON:0003894,1.25e-17,22;UBERON:0009854,7.26e-17,23;UBERON:0000949,2.69e-16,45;UBERON:0002370,4.51e-16,4;UBERON:0005058,4.51e-16,4;UBERON:0009113,4.51e-16,4;UBERON:0003295,4.51e-16,4;UBERON:0005562,4.51e-16,4;UBERON:0007499,1.60e-15,25;UBERON:0009497,1.60e-15,25;UBERON:0000015,1.60e-15,25;UBERON:0002423,1.60e-15,25;UBERON:0006235,1.60e-15,25;UBERON:0004161,1.60e-15,25;UBERON:0009856,6.29e-15,26;UBERON:0003929,1.64e-13,54;UBERON:0002365,1.58e-12,31;UBERON:0002330,1.58e-12,31;UBERON:0002530,2.49e-12,59;UBERON:0003351,4.84e-11,6;UBERON:0004177,1.35e-09,7;UBERON:0005057,1.35e-09,7;UBERON:0005911,9.75e-09,82;UBERON:0001041,3.32e-08,87;UBERON:0005172,3.52e-07,54;UBERON:0005173,3.52e-07,54;UBERON:0000974,5.59e-07,10;UBERON:0003408,5.59e-07,10;UBERON:0001042,5.59e-07,10;UBERON:0009145,5.59e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265059536642971,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,310.549835313486,118.922093217993,129.382989563228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,126.534362303403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,142.533714376044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1451842469678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81599647657131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.429226048136571,0.223171457441873,0,0,0,0.315132729228895,0,0.0674035438541849,0.295282444544246,0,0,0,0,0.137539436597234,0.83088067605837,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,155.345367698767,25.1763088933221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0,0,0.171488009437418,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,2.64463213453628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,6.91101335245265,5.71087371521893,0,0.0636471582781649,0,0,0,0,0.358611026963382,0,0,0,0,0,0,0.122241444182866,0,0,1.00636896795513,0 | |||
|short_description=p2@PON1 | |||
}} |
Revision as of 02:35, 14 September 2013
Short description: | p2@PON1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PON1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 33bp_to_NM_000446, uc003uns.2_5end |
EntrezGene: | PON1 |
HGNC: | 9204 |
UniProt: | P27169 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.86e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
endocrine gland | 4.66e-21 | 35 |
liver | 2.15e-20 | 19 |
digestive gland | 2.15e-20 | 19 |
liver bud | 2.15e-20 | 19 |
hepatic diverticulum | 1.25e-17 | 22 |
liver primordium | 1.25e-17 | 22 |
digestive tract diverticulum | 7.26e-17 | 23 |
endocrine system | 2.69e-16 | 45 |
thymus | 4.51e-16 | 4 |
hemolymphoid system gland | 4.51e-16 | 4 |
thymic region | 4.51e-16 | 4 |
pharyngeal gland | 4.51e-16 | 4 |
thymus primordium | 4.51e-16 | 4 |
epithelial sac | 1.60e-15 | 25 |
epithelium of foregut-midgut junction | 1.60e-15 | 25 |
anatomical boundary | 1.60e-15 | 25 |
hepatobiliary system | 1.60e-15 | 25 |
foregut-midgut junction | 1.60e-15 | 25 |
septum transversum | 1.60e-15 | 25 |
sac | 6.29e-15 | 26 |
gut epithelium | 1.64e-13 | 54 |
exocrine gland | 1.58e-12 | 31 |
exocrine system | 1.58e-12 | 31 |
gland | 2.49e-12 | 59 |
pharyngeal epithelium | 4.84e-11 | 6 |
hemopoietic organ | 1.35e-09 | 7 |
immune organ | 1.35e-09 | 7 |
endo-epithelium | 9.75e-09 | 82 |
foregut | 3.32e-08 | 87 |
abdomen element | 3.52e-07 | 54 |
abdominal segment element | 3.52e-07 | 54 |
neck | 5.59e-07 | 10 |
gland of gut | 5.59e-07 | 10 |
chordate pharynx | 5.59e-07 | 10 |
pharyngeal region of foregut | 5.59e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.