FFCP PHASE1:Mm9::chr3:106285345..106285395,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72121|HGNC=|MCL_coexpression_id=36|UniProt=Q91VV4|association_with_transcript=0bp_to_ENSMUST00000029508,ENSMUST00000149225,NM_001093754,uc008qwa.1,uc012cvr.1_5end|description=CAGE_peak_4_at_Dennd2d_5end|id=chr3:106285345..106285395,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,7.93e-07,32;CL:0002032,7.93e-07,32;CL:0000037,7.93e-07,32;CL:0000837,7.93e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!1.60e-16!70;UBERON:0001041!2.79e-15!92;UBERON:0000077!3.69e-14!97;UBERON:0001007!6.03e-13!128;UBERON:0001555!6.03e-13!128;UBERON:0007026!6.03e-13!128;UBERON:0004921!6.80e-13!126;UBERON:0004185!6.80e-13!126;UBERON:0005057!7.76e-13!51;UBERON:0004119!2.01e-12!130;UBERON:0000925!2.01e-12!130;UBERON:0006595!2.01e-12!130;UBERON:0003104!3.96e-12!131;UBERON:0009142!3.96e-12!131;UBERON:0005911!1.31e-11!69;UBERON:0000949!1.41e-11!72;UBERON:0002193!3.40e-11!48;UBERON:0003929!3.54e-11!55;UBERON:0002390!7.98e-11!45;UBERON:0003061!7.98e-11!45;UBERON:0002530!9.42e-11!65;UBERON:0002368!9.60e-10!60;UBERON:0000490!2.68e-09!66;UBERON:0000926!4.38e-09!193;UBERON:0004120!4.38e-09!193;UBERON:0006603!4.38e-09!193;UBERON:0004177!5.40e-08!29;UBERON:0003408!7.13e-08!24;UBERON:0002370!2.34e-07!23;UBERON:0000974!2.34e-07!23;UBERON:0004807!2.34e-07!23;UBERON:0005058!2.34e-07!23;UBERON:0003351!2.34e-07!23;UBERON:0009113!2.34e-07!23;UBERON:0003295!2.34e-07!23;UBERON:0009722!2.34e-07!23;UBERON:0005562!2.34e-07!23;UBERON:0007690!2.34e-07!23;UBERON:0006562!3.01e-07!24;UBERON:0001557!3.01e-07!24;UBERON:0001042!3.01e-07!24;UBERON:0008814!3.01e-07!24;UBERON:0009145!3.01e-07!24;UBERON:0001004!3.16e-07!42;UBERON:0002365!7.10e-07!25;UBERON:0002330!7.10e-07!25;UBERON:0000065!8.69e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0000949,5.55e-15,72;UBERON:0003929,6.37e-15,55;UBERON:0000490,2.70e-14,66;UBERON:0002530,1.43e-13,65;UBERON:0002390,5.31e-13,45;UBERON:0003061,5.31e-13,45;UBERON:0001041,1.03e-12,80;UBERON:0002193,1.31e-12,48;UBERON:0002405,1.31e-12,48;UBERON:0005911,1.35e-12,69;UBERON:0002368,3.65e-12,60;UBERON:0003408,3.97e-11,24;UBERON:0004921,6.27e-11,114;UBERON:0004177,6.43e-11,29;UBERON:0005057,6.43e-11,29;UBERON:0001007,2.09e-10,116;UBERON:0001555,2.09e-10,116;UBERON:0007026,2.09e-10,116;UBERON:0002370,2.13e-10,23;UBERON:0000974,2.13e-10,23;UBERON:0004807,2.13e-10,23;UBERON:0005058,2.13e-10,23;UBERON:0003351,2.13e-10,23;UBERON:0009113,2.13e-10,23;UBERON:0003295,2.13e-10,23;UBERON:0009722,2.13e-10,23;UBERON:0005562,2.13e-10,23;UBERON:0007690,2.13e-10,23;UBERON:0004119,6.64e-10,118;UBERON:0000925,6.64e-10,118;UBERON:0006595,6.64e-10,118;UBERON:0006562,1.15e-09,24;UBERON:0001557,1.15e-09,24;UBERON:0001042,1.15e-09,24;UBERON:0008814,1.15e-09,24;UBERON:0009145,1.15e-09,24;UBERON:0000077,2.34e-09,35;UBERON:0000072,9.99e-09,27;UBERON:0002365,8.90e-08,25;UBERON:0002330,8.90e-08,25;UBERON:0001004,6.37e-07,42|phase1_expression=0.320297694209588,0,0,1.51232105653415,1.00179145989269,1.34303417529512,1.16806320297763,0.645616617207881,1.12630977721333,0.936258105287974,2.91070545983358,1.59544317990673,1.71200729931206,2.27293046289393,1.99865857089398,2.63217847606774,1.39912375625629,9.77932712610537,11.9289557236993,10.6097412949508,0.595303031057488,3.27660138962921,3.6567970479451,0.639969691173627,0.68822784320151,0,0.430761996159075,0.646413698057667,0.190023419456374,0,0.886922042621219,0.635030673459631,0.61506478758457,0,2.02196133825892,1.16364251750945,0.612508068787107,13.811543814318,14.8453715459522,13.6116173433188,25.8821854733646,19.8083190637949,28.1596004758069,0,0.101376931219515,0,0,0.218025156380447,0.219686182734472,0,0,0,9.73139115134871,0,2.01656279485478,0,0,0,0,1.05798195854407,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0,0.441737081903227,0,0,0,3.30347642998166,0.255374676170375,0.46081959976873,0.131886287730194,0,0.52091337055676,0.558365998002762,0.56276261003168,0.30559649555362,0.294628585473668,0.284743361598206,0,0.151452386666368,0,4.05810284182349,2.58127163094416,1.3599426674155,1.07940638327563,1.29955283489534,0.896053774194671,1.26399978118577,0,0.259786004602869,0,2.39433813620357,0,0,0,0.649473123033642,0,1.51657333504435,1.7127581957859,5.69663344023778,0.148442139064825,0.173485326766136,0,0.691846491768175,0.301445281105245,0.470354828542819,0,0.247194967734374,1.44599356919912,3.5384422077995,0.485300549842228,0.883366073841574,1.93950101254089,0,0,0,1.27728527604296,1.67741174308288,2.99951365496704,1.77898317902291,0.449371918214468,0,0.251308704225729,0,0,0.62336413367868,0.162241263067758,0.203678727700633,1.7416975885413,1.0108910337347,0.420883711772948,0.650602214813519,0.459804208866946,0,0.30140963567143,0.136072998302656,0,0.187403449119458,0,0,0.378212160335639,0.175951124163949,1.31517439456545,0.834141747676794,0.696504333044333,0.823128545631774,0.59710280045548,2.80885274925294,3.08817488537658,2.27330799516474,0.41425154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| ||
|EntrezGene=72121 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=Q91VV4 | |||
|association_with_transcript=0bp_to_ENSMUST00000029508,ENSMUST00000149225,NM_001093754,uc008qwa.1,uc012cvr.1_5end | |||
|description=CAGE_peak_4_at_Dennd2d_5end | |||
|id=chr3:106285345..106285395,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.93e-07,32;CL:0002032,7.93e-07,32;CL:0000037,7.93e-07,32;CL:0000837,7.93e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.60e-16!70;UBERON:0001041!2.79e-15!92;UBERON:0000077!3.69e-14!97;UBERON:0001007!6.03e-13!128;UBERON:0001555!6.03e-13!128;UBERON:0007026!6.03e-13!128;UBERON:0004921!6.80e-13!126;UBERON:0004185!6.80e-13!126;UBERON:0005057!7.76e-13!51;UBERON:0004119!2.01e-12!130;UBERON:0000925!2.01e-12!130;UBERON:0006595!2.01e-12!130;UBERON:0003104!3.96e-12!131;UBERON:0009142!3.96e-12!131;UBERON:0005911!1.31e-11!69;UBERON:0000949!1.41e-11!72;UBERON:0002193!3.40e-11!48;UBERON:0003929!3.54e-11!55;UBERON:0002390!7.98e-11!45;UBERON:0003061!7.98e-11!45;UBERON:0002530!9.42e-11!65;UBERON:0002368!9.60e-10!60;UBERON:0000490!2.68e-09!66;UBERON:0000926!4.38e-09!193;UBERON:0004120!4.38e-09!193;UBERON:0006603!4.38e-09!193;UBERON:0004177!5.40e-08!29;UBERON:0003408!7.13e-08!24;UBERON:0002370!2.34e-07!23;UBERON:0000974!2.34e-07!23;UBERON:0004807!2.34e-07!23;UBERON:0005058!2.34e-07!23;UBERON:0003351!2.34e-07!23;UBERON:0009113!2.34e-07!23;UBERON:0003295!2.34e-07!23;UBERON:0009722!2.34e-07!23;UBERON:0005562!2.34e-07!23;UBERON:0007690!2.34e-07!23;UBERON:0006562!3.01e-07!24;UBERON:0001557!3.01e-07!24;UBERON:0001042!3.01e-07!24;UBERON:0008814!3.01e-07!24;UBERON:0009145!3.01e-07!24;UBERON:0001004!3.16e-07!42;UBERON:0002365!7.10e-07!25;UBERON:0002330!7.10e-07!25;UBERON:0000065!8.69e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000949,5.55e-15,72;UBERON:0003929,6.37e-15,55;UBERON:0000490,2.70e-14,66;UBERON:0002530,1.43e-13,65;UBERON:0002390,5.31e-13,45;UBERON:0003061,5.31e-13,45;UBERON:0001041,1.03e-12,80;UBERON:0002193,1.31e-12,48;UBERON:0002405,1.31e-12,48;UBERON:0005911,1.35e-12,69;UBERON:0002368,3.65e-12,60;UBERON:0003408,3.97e-11,24;UBERON:0004921,6.27e-11,114;UBERON:0004177,6.43e-11,29;UBERON:0005057,6.43e-11,29;UBERON:0001007,2.09e-10,116;UBERON:0001555,2.09e-10,116;UBERON:0007026,2.09e-10,116;UBERON:0002370,2.13e-10,23;UBERON:0000974,2.13e-10,23;UBERON:0004807,2.13e-10,23;UBERON:0005058,2.13e-10,23;UBERON:0003351,2.13e-10,23;UBERON:0009113,2.13e-10,23;UBERON:0003295,2.13e-10,23;UBERON:0009722,2.13e-10,23;UBERON:0005562,2.13e-10,23;UBERON:0007690,2.13e-10,23;UBERON:0004119,6.64e-10,118;UBERON:0000925,6.64e-10,118;UBERON:0006595,6.64e-10,118;UBERON:0006562,1.15e-09,24;UBERON:0001557,1.15e-09,24;UBERON:0001042,1.15e-09,24;UBERON:0008814,1.15e-09,24;UBERON:0009145,1.15e-09,24;UBERON:0000077,2.34e-09,35;UBERON:0000072,9.99e-09,27;UBERON:0002365,8.90e-08,25;UBERON:0002330,8.90e-08,25;UBERON:0001004,6.37e-07,42 | |||
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| |||
|short_description=p4@Dennd2d | |||
}} |
Revision as of 01:08, 14 September 2013
Short description: | p4@Dennd2d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Dennd2d_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000029508, ENSMUST00000149225, NM_001093754, uc008qwa.1, uc012cvr.1_5end |
EntrezGene: | Dennd2d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.93e-07 | 32 |
hematopoietic oligopotent progenitor cell | 7.93e-07 | 32 |
hematopoietic stem cell | 7.93e-07 | 32 |
hematopoietic multipotent progenitor cell | 7.93e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.