FFCP PHASE1:Mm9::chr1:61034784..61034801,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54167|HGNC=|MCL_coexpression_id=170|UniProt=Q5SUZ8,Q9WVS0|association_with_transcript=13bp_to_ENSMUST00000027162,ENSMUST00000102827_5end|description=CAGE_peak_2_at_Icos_5end|id=chr1:61034784..61034801,+|ontology_enrichment_celltype=CL:0000838!9.81e-15!12;CL:0000084!2.96e-14!11;CL:0000827!2.96e-14!11;CL:0000542!2.63e-13!13;CL:0000051!2.63e-13!13;CL:0000791!1.34e-12!9;CL:0000789!1.34e-12!9;CL:0002420!1.34e-12!9;CL:0002419!1.34e-12!9;CL:0000790!1.34e-12!9;CL:0000624!3.01e-11!8;CL:0002031!4.44e-10!25;CL:0000738!2.63e-09!17;CL:0002087!2.63e-09!17;CL:0000893!1.23e-08!6;CL:0002489!1.23e-08!6;CL:0000898!1.23e-08!6;CL:0000809!1.23e-08!6;CL:0000810!1.23e-08!6;CL:0000895!1.23e-08!6;CL:0000808!1.23e-08!6;CL:0000894!1.23e-08!6;CL:0000806!1.23e-08!6;CL:0000807!1.23e-08!6;CL:0000805!1.23e-08!6;CL:0002425!1.23e-08!6;CL:0002436!1.23e-08!6;CL:0002427!1.23e-08!6;CL:0002428!1.23e-08!6;CL:0002429!1.23e-08!6;CL:0002433!1.23e-08!6;CL:0002431!1.23e-08!6;CL:0002432!1.23e-08!6;CL:0000988!1.15e-07!32;CL:0002032!1.15e-07!32;CL:0000037!1.15e-07!32;CL:0000566!1.15e-07!32;CL:0000837!1.15e-07!32|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-24,9;CL:0000789,1.43e-24,9;CL:0002420,1.43e-24,9;CL:0002419,1.43e-24,9;CL:0000790,1.43e-24,9;CL:0000624,3.70e-21,8;CL:0000084,7.04e-20,11;CL:0000827,7.04e-20,11;CL:0000838,4.06e-18,12;CL:0000542,1.26e-16,13;CL:0000051,1.26e-16,13;CL:0000893,1.31e-14,6;CL:0002489,1.31e-14,6;CL:0000898,1.31e-14,6;CL:0000809,1.31e-14,6;CL:0000810,1.31e-14,6;CL:0000895,1.31e-14,6;CL:0000808,1.31e-14,6;CL:0000894,1.31e-14,6;CL:0000806,1.31e-14,6;CL:0000807,1.31e-14,6;CL:0000805,1.31e-14,6;CL:0002425,1.31e-14,6;CL:0002436,1.31e-14,6;CL:0002427,1.31e-14,6;CL:0002428,1.31e-14,6;CL:0002429,1.31e-14,6;CL:0002433,1.31e-14,6;CL:0002431,1.31e-14,6;CL:0002432,1.31e-14,6;CL:0000738,2.04e-12,17;CL:0002087,2.04e-12,17;CL:0002031,3.03e-12,25;CL:0000988,3.59e-09,32;CL:0002032,3.59e-09,32;CL:0000037,3.59e-09,32;CL:0000837,3.59e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.63e-22!29;UBERON:0002370!9.29e-21!23;UBERON:0000974!9.29e-21!23;UBERON:0004807!9.29e-21!23;UBERON:0005058!9.29e-21!23;UBERON:0003351!9.29e-21!23;UBERON:0009113!9.29e-21!23;UBERON:0003295!9.29e-21!23;UBERON:0009722!9.29e-21!23;UBERON:0005562!9.29e-21!23;UBERON:0007690!9.29e-21!23;UBERON:0006562!1.36e-19!24;UBERON:0003408!1.36e-19!24;UBERON:0001557!1.36e-19!24;UBERON:0001042!1.36e-19!24;UBERON:0008814!1.36e-19!24;UBERON:0009145!1.36e-19!24;UBERON:0005057!2.46e-19!51;UBERON:0002405!6.62e-17!70;UBERON:0000065!7.58e-17!41;UBERON:0002390!1.10e-16!45;UBERON:0003061!1.10e-16!45;UBERON:0000072!1.25e-16!27;UBERON:0002193!1.33e-16!48;UBERON:0001004!3.12e-16!42;UBERON:0005911!3.26e-14!69;UBERON:0000077!1.03e-13!97;UBERON:0001041!2.38e-13!92;UBERON:0000063!1.43e-12!35;UBERON:0003929!2.23e-12!55;UBERON:0002530!6.61e-12!65;UBERON:0002368!1.33e-11!60;UBERON:0004119!7.19e-09!130;UBERON:0000925!7.19e-09!130;UBERON:0006595!7.19e-09!130;UBERON:0000490!7.34e-09!66;UBERON:0004921!7.39e-09!126;UBERON:0004185!7.39e-09!126;UBERON:0003081!1.15e-08!88;UBERON:0001007!1.59e-08!128;UBERON:0001555!1.59e-08!128;UBERON:0007026!1.59e-08!128;UBERON:0000949!3.39e-08!72;UBERON:0003104!4.36e-08!131;UBERON:0009142!4.36e-08!131;UBERON:0001048!1.31e-07!147;UBERON:0000926!2.99e-07!193;UBERON:0004120!2.99e-07!193;UBERON:0006603!2.99e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.90e-44,23;UBERON:0000974,4.90e-44,23;UBERON:0004807,4.90e-44,23;UBERON:0005058,4.90e-44,23;UBERON:0003351,4.90e-44,23;UBERON:0009113,4.90e-44,23;UBERON:0003295,4.90e-44,23;UBERON:0009722,4.90e-44,23;UBERON:0005562,4.90e-44,23;UBERON:0007690,4.90e-44,23;UBERON:0006562,4.67e-42,24;UBERON:0003408,4.67e-42,24;UBERON:0001557,4.67e-42,24;UBERON:0001042,4.67e-42,24;UBERON:0008814,4.67e-42,24;UBERON:0009145,4.67e-42,24;UBERON:0004177,4.58e-38,29;UBERON:0005057,4.58e-38,29;UBERON:0000072,5.36e-37,27;UBERON:0000077,6.49e-31,35;UBERON:0002193,1.27e-29,48;UBERON:0002405,1.27e-29,48;UBERON:0002390,1.16e-28,45;UBERON:0003061,1.16e-28,45;UBERON:0007811,7.20e-27,36;UBERON:0000065,3.68e-23,41;UBERON:0001004,1.59e-22,42;UBERON:0000153,6.44e-22,43;UBERON:0003929,2.34e-16,55;UBERON:0002368,1.08e-14,60;UBERON:0003081,2.34e-14,87;UBERON:0002530,2.74e-13,65;UBERON:0000490,4.94e-13,66;UBERON:0005911,2.61e-12,69;UBERON:0000949,1.20e-11,72;UBERON:0001041,2.00e-11,80;UBERON:0000926,2.28e-10,120;UBERON:0004120,2.28e-10,120;UBERON:0006603,2.28e-10,120;UBERON:0004921,6.75e-07,114|phase1_expression=0,0,0,0,0,0,0,10.2007425518845,19.9919985455367,3.5109678948299,10.4442960617558,0.558405112967355,23.4545000005752,2.27293046289393,0,0.404950534779652,0,1.26184866143295,1.91960207048034,0.84877930359606,0,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,36.9934692425786,37.9785993030984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0985774622397,0.593768556259299,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.763877555344259,0,0.162135226775035,0,0,0.744281895337007,0.936113019343682,0,0,0.482443521363367,0.923765950833023,0,0,0,0,0.335012514883631,0,0,0,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0.119372344003136,0,0,0,1.19609616558497,0,0,0.376736914009382,0.683471138605126,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,4.4241556887945,1.21635129174099,1.84879722896689,1.42912905275575,0.716106782669926,3.77494574084403,2.88469078847925,2.36303243479324,2.72609414859999,2.28620419965,3.52891647978942,4.48306251402861,3.84847366561318,3.03879945672079,0,0,0,0,0.19318959403219,2.064507229963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0.695603506861264|short_description=p2@Icos}} | ||
|EntrezGene=54167 | |||
|HGNC= | |||
|MCL_coexpression_id=170 | |||
|UniProt=Q5SUZ8,Q9WVS0 | |||
|association_with_transcript=13bp_to_ENSMUST00000027162,ENSMUST00000102827_5end | |||
|description=CAGE_peak_2_at_Icos_5end | |||
|id=chr1:61034784..61034801,+ | |||
|ontology_enrichment_celltype=CL:0000838!9.81e-15!12;CL:0000084!2.96e-14!11;CL:0000827!2.96e-14!11;CL:0000542!2.63e-13!13;CL:0000051!2.63e-13!13;CL:0000791!1.34e-12!9;CL:0000789!1.34e-12!9;CL:0002420!1.34e-12!9;CL:0002419!1.34e-12!9;CL:0000790!1.34e-12!9;CL:0000624!3.01e-11!8;CL:0002031!4.44e-10!25;CL:0000738!2.63e-09!17;CL:0002087!2.63e-09!17;CL:0000893!1.23e-08!6;CL:0002489!1.23e-08!6;CL:0000898!1.23e-08!6;CL:0000809!1.23e-08!6;CL:0000810!1.23e-08!6;CL:0000895!1.23e-08!6;CL:0000808!1.23e-08!6;CL:0000894!1.23e-08!6;CL:0000806!1.23e-08!6;CL:0000807!1.23e-08!6;CL:0000805!1.23e-08!6;CL:0002425!1.23e-08!6;CL:0002436!1.23e-08!6;CL:0002427!1.23e-08!6;CL:0002428!1.23e-08!6;CL:0002429!1.23e-08!6;CL:0002433!1.23e-08!6;CL:0002431!1.23e-08!6;CL:0002432!1.23e-08!6;CL:0000988!1.15e-07!32;CL:0002032!1.15e-07!32;CL:0000037!1.15e-07!32;CL:0000566!1.15e-07!32;CL:0000837!1.15e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.43e-24,9;CL:0000789,1.43e-24,9;CL:0002420,1.43e-24,9;CL:0002419,1.43e-24,9;CL:0000790,1.43e-24,9;CL:0000624,3.70e-21,8;CL:0000084,7.04e-20,11;CL:0000827,7.04e-20,11;CL:0000838,4.06e-18,12;CL:0000542,1.26e-16,13;CL:0000051,1.26e-16,13;CL:0000893,1.31e-14,6;CL:0002489,1.31e-14,6;CL:0000898,1.31e-14,6;CL:0000809,1.31e-14,6;CL:0000810,1.31e-14,6;CL:0000895,1.31e-14,6;CL:0000808,1.31e-14,6;CL:0000894,1.31e-14,6;CL:0000806,1.31e-14,6;CL:0000807,1.31e-14,6;CL:0000805,1.31e-14,6;CL:0002425,1.31e-14,6;CL:0002436,1.31e-14,6;CL:0002427,1.31e-14,6;CL:0002428,1.31e-14,6;CL:0002429,1.31e-14,6;CL:0002433,1.31e-14,6;CL:0002431,1.31e-14,6;CL:0002432,1.31e-14,6;CL:0000738,2.04e-12,17;CL:0002087,2.04e-12,17;CL:0002031,3.03e-12,25;CL:0000988,3.59e-09,32;CL:0002032,3.59e-09,32;CL:0000037,3.59e-09,32;CL:0000837,3.59e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.63e-22!29;UBERON:0002370!9.29e-21!23;UBERON:0000974!9.29e-21!23;UBERON:0004807!9.29e-21!23;UBERON:0005058!9.29e-21!23;UBERON:0003351!9.29e-21!23;UBERON:0009113!9.29e-21!23;UBERON:0003295!9.29e-21!23;UBERON:0009722!9.29e-21!23;UBERON:0005562!9.29e-21!23;UBERON:0007690!9.29e-21!23;UBERON:0006562!1.36e-19!24;UBERON:0003408!1.36e-19!24;UBERON:0001557!1.36e-19!24;UBERON:0001042!1.36e-19!24;UBERON:0008814!1.36e-19!24;UBERON:0009145!1.36e-19!24;UBERON:0005057!2.46e-19!51;UBERON:0002405!6.62e-17!70;UBERON:0000065!7.58e-17!41;UBERON:0002390!1.10e-16!45;UBERON:0003061!1.10e-16!45;UBERON:0000072!1.25e-16!27;UBERON:0002193!1.33e-16!48;UBERON:0001004!3.12e-16!42;UBERON:0005911!3.26e-14!69;UBERON:0000077!1.03e-13!97;UBERON:0001041!2.38e-13!92;UBERON:0000063!1.43e-12!35;UBERON:0003929!2.23e-12!55;UBERON:0002530!6.61e-12!65;UBERON:0002368!1.33e-11!60;UBERON:0004119!7.19e-09!130;UBERON:0000925!7.19e-09!130;UBERON:0006595!7.19e-09!130;UBERON:0000490!7.34e-09!66;UBERON:0004921!7.39e-09!126;UBERON:0004185!7.39e-09!126;UBERON:0003081!1.15e-08!88;UBERON:0001007!1.59e-08!128;UBERON:0001555!1.59e-08!128;UBERON:0007026!1.59e-08!128;UBERON:0000949!3.39e-08!72;UBERON:0003104!4.36e-08!131;UBERON:0009142!4.36e-08!131;UBERON:0001048!1.31e-07!147;UBERON:0000926!2.99e-07!193;UBERON:0004120!2.99e-07!193;UBERON:0006603!2.99e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.90e-44,23;UBERON:0000974,4.90e-44,23;UBERON:0004807,4.90e-44,23;UBERON:0005058,4.90e-44,23;UBERON:0003351,4.90e-44,23;UBERON:0009113,4.90e-44,23;UBERON:0003295,4.90e-44,23;UBERON:0009722,4.90e-44,23;UBERON:0005562,4.90e-44,23;UBERON:0007690,4.90e-44,23;UBERON:0006562,4.67e-42,24;UBERON:0003408,4.67e-42,24;UBERON:0001557,4.67e-42,24;UBERON:0001042,4.67e-42,24;UBERON:0008814,4.67e-42,24;UBERON:0009145,4.67e-42,24;UBERON:0004177,4.58e-38,29;UBERON:0005057,4.58e-38,29;UBERON:0000072,5.36e-37,27;UBERON:0000077,6.49e-31,35;UBERON:0002193,1.27e-29,48;UBERON:0002405,1.27e-29,48;UBERON:0002390,1.16e-28,45;UBERON:0003061,1.16e-28,45;UBERON:0007811,7.20e-27,36;UBERON:0000065,3.68e-23,41;UBERON:0001004,1.59e-22,42;UBERON:0000153,6.44e-22,43;UBERON:0003929,2.34e-16,55;UBERON:0002368,1.08e-14,60;UBERON:0003081,2.34e-14,87;UBERON:0002530,2.74e-13,65;UBERON:0000490,4.94e-13,66;UBERON:0005911,2.61e-12,69;UBERON:0000949,1.20e-11,72;UBERON:0001041,2.00e-11,80;UBERON:0000926,2.28e-10,120;UBERON:0004120,2.28e-10,120;UBERON:0006603,2.28e-10,120;UBERON:0004921,6.75e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,10.2007425518845,19.9919985455367,3.5109678948299,10.4442960617558,0.558405112967355,23.4545000005752,2.27293046289393,0,0.404950534779652,0,1.26184866143295,1.91960207048034,0.84877930359606,0,0.397163804803541,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,36.9934692425786,37.9785993030984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0985774622397,0.593768556259299,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,0,0,0,0.510914110417183,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43839146485515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0.166845105716094,0,0.224862112384854,0.405720242777006,0,0.763877555344259,0,0.162135226775035,0,0,0.744281895337007,0.936113019343682,0,0,0.482443521363367,0.923765950833023,0,0,0,0,0.335012514883631,0,0,0,0.44292937929755,0.318909537314974,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,0,0,0,0,0,0.119372344003136,0,0,0,1.19609616558497,0,0,0.376736914009382,0.683471138605126,0.457556346413045,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,4.4241556887945,1.21635129174099,1.84879722896689,1.42912905275575,0.716106782669926,3.77494574084403,2.88469078847925,2.36303243479324,2.72609414859999,2.28620419965,3.52891647978942,4.48306251402861,3.84847366561318,3.03879945672079,0,0,0,0,0.19318959403219,2.064507229963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467863216890817,0,0,0,0.695603506861264 | |||
|short_description=p2@Icos | |||
}} |
Revision as of 20:40, 13 September 2013
Short description: | p2@Icos |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Icos_5end |
Coexpression cluster: | MCL_coexpression_mm9:170 |
Association with transcript: | 13bp_to_ENSMUST00000027162, ENSMUST00000102827_5end |
EntrezGene: | Icos |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.