FFCP PHASE1:Mm9::chr15:27560399..27560469,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=432940|HGNC=|MCL_coexpression_id=504|UniProt=Q3UCV8|association_with_transcript=0bp_to_ENSMUST00000059662,NM_001013792,uc007vjr.1_5end|description=CAGE_peak_1_at_Fam105b_5end|id=chr15:27560399..27560469,-|ontology_enrichment_celltype=CL:0002320!4.26e-15!46;CL:0000134!4.26e-15!46;CL:0000063!4.65e-15!66;CL:0000219!3.69e-13!54;CL:0000988!2.06e-11!32;CL:0002032!2.06e-11!32;CL:0000037!2.06e-11!32;CL:0000566!2.06e-11!32;CL:0000837!2.06e-11!32;CL:0002031!7.32e-11!25;CL:0000738!1.11e-07!17;CL:0002087!1.11e-07!17;CL:0000838!1.46e-07!12;CL:0000084!6.92e-07!11;CL:0000827!6.92e-07!11|ontology_enrichment_celltype_v019_2=CL:0002320,4.26e-15,46;CL:0000134,4.26e-15,46;CL:0000219,3.69e-13,54;CL:0000988,2.06e-11,32;CL:0002032,2.06e-11,32;CL:0000037,2.06e-11,32;CL:0000837,2.06e-11,32;CL:0002031,7.32e-11,25;CL:0000738,1.11e-07,17;CL:0002087,1.11e-07,17;CL:0000838,1.46e-07,12;CL:0000084,6.92e-07,11;CL:0000827,6.92e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!8.58e-21!70;UBERON:0005057!8.37e-16!51;UBERON:0002390!2.65e-15!45;UBERON:0003061!2.65e-15!45;UBERON:0002384!4.26e-15!46;UBERON:0003929!7.93e-15!55;UBERON:0002193!2.58e-14!48;UBERON:0000490!1.69e-13!66;UBERON:0005911!2.61e-12!69;UBERON:0003081!1.46e-11!88;UBERON:0004177!5.70e-10!29;UBERON:0000926!8.84e-10!193;UBERON:0004120!8.84e-10!193;UBERON:0006603!8.84e-10!193;UBERON:0001041!1.11e-09!92;UBERON:0000077!1.29e-09!97;UBERON:0000949!2.24e-09!72;UBERON:0002370!5.23e-09!23;UBERON:0000974!5.23e-09!23;UBERON:0004807!5.23e-09!23;UBERON:0005058!5.23e-09!23;UBERON:0003351!5.23e-09!23;UBERON:0009113!5.23e-09!23;UBERON:0003295!5.23e-09!23;UBERON:0009722!5.23e-09!23;UBERON:0005562!5.23e-09!23;UBERON:0007690!5.23e-09!23;UBERON:0002368!6.12e-09!60;UBERON:0003408!1.20e-08!24;UBERON:0006562!2.14e-08!24;UBERON:0001557!2.14e-08!24;UBERON:0001042!2.14e-08!24;UBERON:0008814!2.14e-08!24;UBERON:0009145!2.14e-08!24;UBERON:0002530!5.69e-08!65;UBERON:0003104!6.54e-08!131;UBERON:0009142!6.54e-08!131;UBERON:0000072!1.04e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.65e-15,45;UBERON:0003061,2.65e-15,45;UBERON:0002384,4.26e-15,46;UBERON:0003929,7.93e-15,55;UBERON:0002193,2.58e-14,48;UBERON:0002405,2.58e-14,48;UBERON:0000490,1.69e-13,66;UBERON:0005911,2.61e-12,69;UBERON:0003081,4.70e-11,87;UBERON:0004177,5.70e-10,29;UBERON:0005057,5.70e-10,29;UBERON:0000077,1.36e-09,35;UBERON:0000949,2.24e-09,72;UBERON:0001041,4.68e-09,80;UBERON:0002370,5.23e-09,23;UBERON:0000974,5.23e-09,23;UBERON:0004807,5.23e-09,23;UBERON:0005058,5.23e-09,23;UBERON:0003351,5.23e-09,23;UBERON:0009113,5.23e-09,23;UBERON:0003295,5.23e-09,23;UBERON:0009722,5.23e-09,23;UBERON:0005562,5.23e-09,23;UBERON:0007690,5.23e-09,23;UBERON:0002368,6.12e-09,60;UBERON:0003408,1.20e-08,24;UBERON:0006562,2.14e-08,24;UBERON:0001557,2.14e-08,24;UBERON:0001042,2.14e-08,24;UBERON:0008814,2.14e-08,24;UBERON:0009145,2.14e-08,24;UBERON:0002530,5.69e-08,65;UBERON:0000072,1.04e-07,27|phase1_expression=23.3817316772999,20.9385244583617,32.3049459966571,32.9685990324445,25.5456822272637,30.3861482160521,28.7343547932497,48.9377395843574,61.5246715802784,50.7920022118726,39.5513506600917,45.2308141503557,54.4418321181234,52.5396618538174,43.6373787978518,34.8257459910501,28.682037003254,80.6005832490297,89.9470684453646,89.1218268775863,19.0496969938396,37.4326886027338,41.2695666839518,17.7591589300681,22.4821095445827,28.711598205751,27.5687677541808,23.4863643627619,16.7220609121609,18.9022597319948,18.4036323843903,33.0215950199008,22.7573971406291,47.5445043046316,30.6182716936351,34.0781022984909,34.300451852078,27.204555997899,27.346737058333,32.9819958703493,30.5880373776127,28.0048648832963,31.0726625939938,25.5570540490422,28.4869176726836,38.3612712017914,28.1660883965294,24.2007923582296,34.2710445065776,24.8870270815083,21.1379496654297,40.250718022192,121.642389391859,53.6767985088395,69.57141642249,23.6678681153071,30.659078073447,24.7522604293172,19.4223802425214,28.5655128806898,45.6358610524449,28.124096161738,34.6824970483344,52.6441334609618,37.576921777545,51.8650483910653,29.6604109413221,29.2005912044381,31.4179525294687,29.0262767413135,29.4454945891935,21.4238238302853,22.7494597180162,25.1106138390656,20.7984672109573,59.7492211296514,8.8092704799511,12.5133591323484,15.9750794586493,19.9148294472593,15.0039735507952,19.7947080811569,15.9134309430787,17.4456409109821,12.5294563176984,17.9723437138937,14.6642831223076,22.1815340532108,21.5819650999575,24.2584707942782,42.6100798391466,59.3692475117157,68.6771047044828,59.3673510801599,66.9269709971099,73.476409483963,33.4257719913569,25.2236877415525,24.1600984280668,24.3804306412135,25.9151892389092,57.746914836443,165.62340580932,234.652012040599,29.4427815775251,25.3359865475099,26.2872711407687,44.9884486093096,79.2349923960345,24.7898372238257,25.6758283613881,19.1813251336649,23.753396217374,23.6634545667617,27.6333461768906,30.5369816931111,44.0007042567185,23.7142945348655,22.115263798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| ||
|EntrezGene=432940 | |||
|HGNC= | |||
|MCL_coexpression_id=504 | |||
|UniProt=Q3UCV8 | |||
|association_with_transcript=0bp_to_ENSMUST00000059662,NM_001013792,uc007vjr.1_5end | |||
|description=CAGE_peak_1_at_Fam105b_5end | |||
|id=chr15:27560399..27560469,- | |||
|ontology_enrichment_celltype=CL:0002320!4.26e-15!46;CL:0000134!4.26e-15!46;CL:0000063!4.65e-15!66;CL:0000219!3.69e-13!54;CL:0000988!2.06e-11!32;CL:0002032!2.06e-11!32;CL:0000037!2.06e-11!32;CL:0000566!2.06e-11!32;CL:0000837!2.06e-11!32;CL:0002031!7.32e-11!25;CL:0000738!1.11e-07!17;CL:0002087!1.11e-07!17;CL:0000838!1.46e-07!12;CL:0000084!6.92e-07!11;CL:0000827!6.92e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,4.26e-15,46;CL:0000134,4.26e-15,46;CL:0000219,3.69e-13,54;CL:0000988,2.06e-11,32;CL:0002032,2.06e-11,32;CL:0000037,2.06e-11,32;CL:0000837,2.06e-11,32;CL:0002031,7.32e-11,25;CL:0000738,1.11e-07,17;CL:0002087,1.11e-07,17;CL:0000838,1.46e-07,12;CL:0000084,6.92e-07,11;CL:0000827,6.92e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!8.58e-21!70;UBERON:0005057!8.37e-16!51;UBERON:0002390!2.65e-15!45;UBERON:0003061!2.65e-15!45;UBERON:0002384!4.26e-15!46;UBERON:0003929!7.93e-15!55;UBERON:0002193!2.58e-14!48;UBERON:0000490!1.69e-13!66;UBERON:0005911!2.61e-12!69;UBERON:0003081!1.46e-11!88;UBERON:0004177!5.70e-10!29;UBERON:0000926!8.84e-10!193;UBERON:0004120!8.84e-10!193;UBERON:0006603!8.84e-10!193;UBERON:0001041!1.11e-09!92;UBERON:0000077!1.29e-09!97;UBERON:0000949!2.24e-09!72;UBERON:0002370!5.23e-09!23;UBERON:0000974!5.23e-09!23;UBERON:0004807!5.23e-09!23;UBERON:0005058!5.23e-09!23;UBERON:0003351!5.23e-09!23;UBERON:0009113!5.23e-09!23;UBERON:0003295!5.23e-09!23;UBERON:0009722!5.23e-09!23;UBERON:0005562!5.23e-09!23;UBERON:0007690!5.23e-09!23;UBERON:0002368!6.12e-09!60;UBERON:0003408!1.20e-08!24;UBERON:0006562!2.14e-08!24;UBERON:0001557!2.14e-08!24;UBERON:0001042!2.14e-08!24;UBERON:0008814!2.14e-08!24;UBERON:0009145!2.14e-08!24;UBERON:0002530!5.69e-08!65;UBERON:0003104!6.54e-08!131;UBERON:0009142!6.54e-08!131;UBERON:0000072!1.04e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.65e-15,45;UBERON:0003061,2.65e-15,45;UBERON:0002384,4.26e-15,46;UBERON:0003929,7.93e-15,55;UBERON:0002193,2.58e-14,48;UBERON:0002405,2.58e-14,48;UBERON:0000490,1.69e-13,66;UBERON:0005911,2.61e-12,69;UBERON:0003081,4.70e-11,87;UBERON:0004177,5.70e-10,29;UBERON:0005057,5.70e-10,29;UBERON:0000077,1.36e-09,35;UBERON:0000949,2.24e-09,72;UBERON:0001041,4.68e-09,80;UBERON:0002370,5.23e-09,23;UBERON:0000974,5.23e-09,23;UBERON:0004807,5.23e-09,23;UBERON:0005058,5.23e-09,23;UBERON:0003351,5.23e-09,23;UBERON:0009113,5.23e-09,23;UBERON:0003295,5.23e-09,23;UBERON:0009722,5.23e-09,23;UBERON:0005562,5.23e-09,23;UBERON:0007690,5.23e-09,23;UBERON:0002368,6.12e-09,60;UBERON:0003408,1.20e-08,24;UBERON:0006562,2.14e-08,24;UBERON:0001557,2.14e-08,24;UBERON:0001042,2.14e-08,24;UBERON:0008814,2.14e-08,24;UBERON:0009145,2.14e-08,24;UBERON:0002530,5.69e-08,65;UBERON:0000072,1.04e-07,27 | |||
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| |||
|short_description=p1@Fam105b | |||
}} |
Revision as of 10:18, 13 September 2013
Short description: | p1@Fam105b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam105b_5end |
Coexpression cluster: | MCL_coexpression_mm9:504 |
Association with transcript: | 0bp_to_ENSMUST00000059662, NM_001013792, uc007vjr.1_5end |
EntrezGene: | Fam105b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 4.26e-15 | 46 |
mesenchymal cell | 4.26e-15 | 46 |
motile cell | 3.69e-13 | 54 |
hematopoietic cell | 2.06e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.06e-11 | 32 |
hematopoietic stem cell | 2.06e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.06e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 7.32e-11 | 25 |
leukocyte | 1.11e-07 | 17 |
nongranular leukocyte | 1.11e-07 | 17 |
lymphoid lineage restricted progenitor cell | 1.46e-07 | 12 |
T cell | 6.92e-07 | 11 |
pro-T cell | 6.92e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.65e-15 | 45 |
blood island | 2.65e-15 | 45 |
connective tissue | 4.26e-15 | 46 |
gut epithelium | 7.93e-15 | 55 |
hemolymphoid system | 2.58e-14 | 48 |
immune system | 2.58e-14 | 48 |
unilaminar epithelium | 1.69e-13 | 66 |
endo-epithelium | 2.61e-12 | 69 |
lateral plate mesoderm | 4.70e-11 | 87 |
hemopoietic organ | 5.70e-10 | 29 |
immune organ | 5.70e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.36e-09 | 35 |
endocrine system | 2.24e-09 | 72 |
foregut | 4.68e-09 | 80 |
thymus | 5.23e-09 | 23 |
neck | 5.23e-09 | 23 |
respiratory system epithelium | 5.23e-09 | 23 |
hemolymphoid system gland | 5.23e-09 | 23 |
pharyngeal epithelium | 5.23e-09 | 23 |
thymic region | 5.23e-09 | 23 |
pharyngeal gland | 5.23e-09 | 23 |
entire pharyngeal arch endoderm | 5.23e-09 | 23 |
thymus primordium | 5.23e-09 | 23 |
early pharyngeal endoderm | 5.23e-09 | 23 |
endocrine gland | 6.12e-09 | 60 |
gland of gut | 1.20e-08 | 24 |
pharynx | 2.14e-08 | 24 |
upper respiratory tract | 2.14e-08 | 24 |
chordate pharynx | 2.14e-08 | 24 |
pharyngeal arch system | 2.14e-08 | 24 |
pharyngeal region of foregut | 2.14e-08 | 24 |
gland | 5.69e-08 | 65 |
segment of respiratory tract | 1.04e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.