FFCP PHASE1:Hg19::chr2:165698497..165698518,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=22837|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23571|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_ENST00000483743_5end|coexpression_cluster_id=C148|description=CAGE_peak_8_at_COBLL1_5end|id=chr2:165698497..165698518,-|ontology_enrichment_celltype=CL:1000507!8.76e-09!12;CL:1000494!8.76e-09!12|ontology_enrichment_celltype_v019=CL:1000507;2.93e-16;10!CL:1000494;2.93e-16;10!CL:1000449;8.92e-11;15!CL:0000239;7.63e-10;3!CL:1000615;7.63e-10;3!CL:0002306;7.63e-10;3!CL:0002541;1.35e-09;3!CL:1000497;1.76e-09;17!CL:0002518;1.76e-09;17!CL:0002681;5.00e-09;12!CL:0002584;5.00e-09;12!CL:0000222;1.26e-07;1!CL:0000313;1.26e-07;1|ontology_enrichment_celltype_v019_2=CL:1000507,2.89e-16,10;CL:1000494,2.89e-16,10;CL:1000449,8.84e-11,15;CL:0000239,7.81e-10,3;CL:1000615,7.81e-10,3;CL:0002306,7.81e-10,3;CL:0002541,1.26e-09,3;CL:1000497,1.74e-09,17;CL:0002518,1.74e-09,17;CL:0002681,5.17e-09,12;CL:0002584,5.17e-09,12;CL:0000313,1.75e-07,1|ontology_enrichment_development_v019=UBERON:0003124;3.10e-08;1|ontology_enrichment_disease=DOID:120!3.46e-09!27;DOID:193!3.19e-08!29;DOID:2394!2.80e-07!14|ontology_enrichment_disease_v019=DOID:2152;1.26e-07;1|ontology_enrichment_disease_v019_2=DOID:2152,1.75e-07,1|ontology_enrichment_uberon=UBERON:0003886!1.58e-09!63;UBERON:0009773!8.76e-09!12;UBERON:0001231!8.76e-09!12;UBERON:0004810!8.76e-09!12;UBERON:0002553!9.57e-08!70;UBERON:0003064!2.34e-07!37;UBERON:0002417!3.28e-07!61;UBERON:0000916!3.28e-07!61;UBERON:0003887!4.28e-07!21;UBERON:0005156!5.26e-07!59;UBERON:0000990!5.26e-07!59;UBERON:0003133!5.32e-07!48;UBERON:0006555!6.23e-07!17;UBERON:0005103!6.23e-07!17;UBERON:0000083!6.23e-07!17;UBERON:0009201!6.23e-07!17;UBERON:0004819!6.23e-07!17;UBERON:0006553!6.23e-07!17;UBERON:0003074!6.23e-07!17;UBERON:0003060!6.23e-07!17;UBERON:0004876!9.21e-07!20|ontology_enrichment_uberon_v019=UBERON:0004211;2.93e-16;10!UBERON:0009773;2.93e-16;10!UBERON:0001231;2.93e-16;10!UBERON:0004810;2.93e-16;10!UBERON:0006554;6.08e-13;30!UBERON:0001008;6.08e-13;30!UBERON:0002113;9.39e-13;24!UBERON:0011143;9.39e-13;24!UBERON:0006555;8.92e-11;15!UBERON:0004819;8.92e-11;15!UBERON:0001285;8.92e-11;15!UBERON:0007684;8.92e-11;15!UBERON:0000489;2.10e-10;29!UBERON:0006853;7.63e-10;3!UBERON:0007685;7.63e-10;3!UBERON:0004134;7.63e-10;3!UBERON:0003124;1.35e-09;3!UBERON:0000920;1.35e-09;3!UBERON:0001225;5.00e-09;12!UBERON:0008987;5.00e-09;12!UBERON:0001301;5.15e-08;1!UBERON:0004911;1.26e-07;1!UBERON:0001851;3.08e-07;15!UBERON:0000353;3.08e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.89e-16,10;UBERON:0002113,3.18e-15,26;UBERON:0003918,3.18e-15,26;UBERON:0011143,3.18e-15,26;UBERON:0005095,3.18e-15,26;UBERON:0007687,3.18e-15,26;UBERON:0006555,2.68e-14,16;UBERON:0004819,2.68e-14,16;UBERON:0000489,1.40e-12,31;UBERON:0006554,2.22e-12,47;UBERON:0001008,4.38e-12,48;UBERON:0004211,8.84e-11,15;UBERON:0009773,8.84e-11,15;UBERON:0001231,8.84e-11,15;UBERON:0001285,8.84e-11,15;UBERON:0007684,8.84e-11,15;UBERON:0004208,8.84e-11,15;UBERON:0006853,7.81e-10,3;UBERON:0007685,7.81e-10,3;UBERON:0004134,7.81e-10,3;UBERON:0000920,1.26e-09,3;UBERON:0003124,4.47e-09,7;UBERON:0001225,5.17e-09,12;UBERON:0008987,5.17e-09,12;UBERON:0005172,1.85e-08,54;UBERON:0005173,1.85e-08,54;UBERON:0001301,5.33e-08,1;UBERON:0004911,1.75e-07,1;UBERON:0002417,1.81e-07,60;UBERON:0000916,1.81e-07,60;UBERON:0001851,3.16e-07,15;UBERON:0000353,3.16e-07,15|phase1_expression=0.363356758541113,0,0.422863212287913,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,1.72425731986345,0.661044872784862,1.90810750907073,0.569212969109448,0.587237189370939,0.764546456250458,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,4.51877810467109,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.860919069801795,0,0.219500570817251,1.1240175325762,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0.829312462163088,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.630809660135739,0.35142424497814,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0.482561763430822,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0,0,0,0.902399225814824,3.77375151811632,0,1.46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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=22837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23571 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000483743_5end | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_8_at_COBLL1_5end | |||
|id=chr2:165698497..165698518,- | |||
|ontology_enrichment_celltype=CL:1000507!8.76e-09!12;CL:1000494!8.76e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:1000507;2.93e-16;10!CL:1000494;2.93e-16;10!CL:1000449;8.92e-11;15!CL:0000239;7.63e-10;3!CL:1000615;7.63e-10;3!CL:0002306;7.63e-10;3!CL:0002541;1.35e-09;3!CL:1000497;1.76e-09;17!CL:0002518;1.76e-09;17!CL:0002681;5.00e-09;12!CL:0002584;5.00e-09;12!CL:0000222;1.26e-07;1!CL:0000313;1.26e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,2.89e-16,10;CL:1000494,2.89e-16,10;CL:1000449,8.84e-11,15;CL:0000239,7.81e-10,3;CL:1000615,7.81e-10,3;CL:0002306,7.81e-10,3;CL:0002541,1.26e-09,3;CL:1000497,1.74e-09,17;CL:0002518,1.74e-09,17;CL:0002681,5.17e-09,12;CL:0002584,5.17e-09,12;CL:0000313,1.75e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.10e-08;1 | |||
|ontology_enrichment_disease=DOID:120!3.46e-09!27;DOID:193!3.19e-08!29;DOID:2394!2.80e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.26e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.75e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003886!1.58e-09!63;UBERON:0009773!8.76e-09!12;UBERON:0001231!8.76e-09!12;UBERON:0004810!8.76e-09!12;UBERON:0002553!9.57e-08!70;UBERON:0003064!2.34e-07!37;UBERON:0002417!3.28e-07!61;UBERON:0000916!3.28e-07!61;UBERON:0003887!4.28e-07!21;UBERON:0005156!5.26e-07!59;UBERON:0000990!5.26e-07!59;UBERON:0003133!5.32e-07!48;UBERON:0006555!6.23e-07!17;UBERON:0005103!6.23e-07!17;UBERON:0000083!6.23e-07!17;UBERON:0009201!6.23e-07!17;UBERON:0004819!6.23e-07!17;UBERON:0006553!6.23e-07!17;UBERON:0003074!6.23e-07!17;UBERON:0003060!6.23e-07!17;UBERON:0004876!9.21e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;2.93e-16;10!UBERON:0009773;2.93e-16;10!UBERON:0001231;2.93e-16;10!UBERON:0004810;2.93e-16;10!UBERON:0006554;6.08e-13;30!UBERON:0001008;6.08e-13;30!UBERON:0002113;9.39e-13;24!UBERON:0011143;9.39e-13;24!UBERON:0006555;8.92e-11;15!UBERON:0004819;8.92e-11;15!UBERON:0001285;8.92e-11;15!UBERON:0007684;8.92e-11;15!UBERON:0000489;2.10e-10;29!UBERON:0006853;7.63e-10;3!UBERON:0007685;7.63e-10;3!UBERON:0004134;7.63e-10;3!UBERON:0003124;1.35e-09;3!UBERON:0000920;1.35e-09;3!UBERON:0001225;5.00e-09;12!UBERON:0008987;5.00e-09;12!UBERON:0001301;5.15e-08;1!UBERON:0004911;1.26e-07;1!UBERON:0001851;3.08e-07;15!UBERON:0000353;3.08e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.89e-16,10;UBERON:0002113,3.18e-15,26;UBERON:0003918,3.18e-15,26;UBERON:0011143,3.18e-15,26;UBERON:0005095,3.18e-15,26;UBERON:0007687,3.18e-15,26;UBERON:0006555,2.68e-14,16;UBERON:0004819,2.68e-14,16;UBERON:0000489,1.40e-12,31;UBERON:0006554,2.22e-12,47;UBERON:0001008,4.38e-12,48;UBERON:0004211,8.84e-11,15;UBERON:0009773,8.84e-11,15;UBERON:0001231,8.84e-11,15;UBERON:0001285,8.84e-11,15;UBERON:0007684,8.84e-11,15;UBERON:0004208,8.84e-11,15;UBERON:0006853,7.81e-10,3;UBERON:0007685,7.81e-10,3;UBERON:0004134,7.81e-10,3;UBERON:0000920,1.26e-09,3;UBERON:0003124,4.47e-09,7;UBERON:0001225,5.17e-09,12;UBERON:0008987,5.17e-09,12;UBERON:0005172,1.85e-08,54;UBERON:0005173,1.85e-08,54;UBERON:0001301,5.33e-08,1;UBERON:0004911,1.75e-07,1;UBERON:0002417,1.81e-07,60;UBERON:0000916,1.81e-07,60;UBERON:0001851,3.16e-07,15;UBERON:0000353,3.16e-07,15 | |||
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|short_description=p8@COBLL1 | |||
}} |
Revision as of 14:27, 12 September 2013
Short description: | p8@COBLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_COBLL1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | -3bp_to_ENST00000483743_5end |
EntrezGene: | COBLL1 |
HGNC: | 23571 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 2.89e-16 | 10 |
nephron tubule epithelial cell | 2.89e-16 | 10 |
epithelial cell of nephron | 8.84e-11 | 15 |
brush border epithelial cell | 7.81e-10 | 3 |
kidney cortex tubule cell | 7.81e-10 | 3 |
epithelial cell of proximal tubule | 7.81e-10 | 3 |
chorionic membrane mesenchymal stem cell | 1.26e-09 | 3 |
kidney cell | 1.74e-09 | 17 |
kidney epithelial cell | 1.74e-09 | 17 |
kidney cortical cell | 5.17e-09 | 12 |
renal cortical epithelial cell | 5.17e-09 | 12 |
serous secreting cell | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.89e-16 | 10 |
kidney | 3.18e-15 | 26 |
kidney mesenchyme | 3.18e-15 | 26 |
upper urinary tract | 3.18e-15 | 26 |
kidney rudiment | 3.18e-15 | 26 |
kidney field | 3.18e-15 | 26 |
excretory tube | 2.68e-14 | 16 |
kidney epithelium | 2.68e-14 | 16 |
cavitated compound organ | 1.40e-12 | 31 |
urinary system structure | 2.22e-12 | 47 |
renal system | 4.38e-12 | 48 |
nephron epithelium | 8.84e-11 | 15 |
renal tubule | 8.84e-11 | 15 |
nephron tubule | 8.84e-11 | 15 |
nephron | 8.84e-11 | 15 |
uriniferous tubule | 8.84e-11 | 15 |
nephrogenic mesenchyme | 8.84e-11 | 15 |
renal cortex tubule | 7.81e-10 | 3 |
region of nephron tubule | 7.81e-10 | 3 |
proximal tubule | 7.81e-10 | 3 |
egg chorion | 1.26e-09 | 3 |
chorion | 4.47e-09 | 7 |
cortex of kidney | 5.17e-09 | 12 |
renal parenchyma | 5.17e-09 | 12 |
abdomen element | 1.85e-08 | 54 |
abdominal segment element | 1.85e-08 | 54 |
epididymis | 5.33e-08 | 1 |
epithelium of female gonad | 1.75e-07 | 1 |
abdominal segment of trunk | 1.81e-07 | 60 |
abdomen | 1.81e-07 | 60 |
cortex | 3.16e-07 | 15 |
parenchyma | 3.16e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.75e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.