FFCP PHASE1:Hg19::chr22:44208092..44208107,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24204|TSSclassifier=S|UniProt=B4DKR4|association_with_transcript=9bp_to_ENST00000358439_5end|coexpression_cluster_id=C111|description=CAGE_peak_3_at_EFCAB6_5end|id=chr22:44208092..44208107,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002535;5.11e-07;2!CL:0000047;8.28e-07;2|ontology_enrichment_celltype_v019_2=CL:0002535,5.11e-07,2|ontology_enrichment_development_v019=UBERON:0010122;8.28e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.00e-21!57;UBERON:0005068!3.00e-21!57;UBERON:0006241!3.00e-21!57;UBERON:0007135!3.00e-21!57;UBERON:0005743!3.24e-20!86;UBERON:0001017!1.04e-19!82;UBERON:0000073!1.48e-19!94;UBERON:0001016!1.48e-19!94;UBERON:0003080!4.79e-18!42;UBERON:0002616!1.57e-17!59;UBERON:0002020!1.95e-17!34;UBERON:0003528!1.95e-17!34;UBERON:0001869!3.19e-17!32;UBERON:0001893!3.64e-17!34;UBERON:0002780!4.05e-17!41;UBERON:0001890!4.05e-17!41;UBERON:0006240!4.05e-17!41;UBERON:0002791!2.53e-16!33;UBERON:0000955!1.05e-15!69;UBERON:0006238!1.05e-15!69;UBERON:0002346!3.03e-15!90;UBERON:0003075!7.46e-15!86;UBERON:0007284!7.46e-15!86;UBERON:0003056!4.24e-14!61;UBERON:0007023!4.10e-13!115;UBERON:0000956!3.97e-11!25;UBERON:0000203!3.97e-11!25;UBERON:0000033!4.49e-11!123;UBERON:0000924!7.43e-11!173;UBERON:0006601!7.43e-11!173;UBERON:0004121!1.94e-10!169;UBERON:0002619!1.96e-10!22;UBERON:0000153!2.28e-10!129;UBERON:0007811!2.28e-10!129;UBERON:0001950!2.52e-10!20;UBERON:0002308!3.24e-08!9;UBERON:0000125!3.24e-08!9;UBERON:0002298!3.54e-07!8|ontology_enrichment_uberon_v019=UBERON:0000007;6.10e-23;2!UBERON:0002114;1.22e-15;2!UBERON:0003296;5.70e-12;4!UBERON:0010133;5.70e-12;4!UBERON:0002108;9.27e-10;4!UBERON:0002780;1.66e-07;41!UBERON:0001890;1.66e-07;41!UBERON:0001894;3.24e-07;7!UBERON:0009663;3.24e-07;7!UBERON:0006955;5.11e-07;2!UBERON:0004801;5.11e-07;2!UBERON:0001873;8.28e-07;2!UBERON:0001875;8.28e-07;2!UBERON:0006514;8.28e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.78e-23,2;UBERON:0002114,1.91e-15,2;UBERON:0003296,3.09e-12,4;UBERON:0010133,3.09e-12,4;UBERON:0002108,1.21e-09,4;UBERON:0000073,2.25e-09,53;UBERON:0002616,2.25e-09,53;UBERON:0002780,3.97e-09,41;UBERON:0001890,3.97e-09,41;UBERON:0003080,3.97e-09,41;UBERON:0006240,3.97e-09,41;UBERON:0001049,7.59e-09,56;UBERON:0005068,7.59e-09,56;UBERON:0006241,7.59e-09,56;UBERON:0007135,7.59e-09,56;UBERON:0001017,1.32e-07,81;UBERON:0001894,2.30e-07,7;UBERON:0006222,2.30e-07,7;UBERON:0009663,2.95e-07,7;UBERON:0000955,4.44e-07,68;UBERON:0006238,4.44e-07,68;UBERON:0006955,5.11e-07,2;UBERON:0004801,5.11e-07,2;UBERON:0001873,6.07e-07,2;UBERON:0010122,6.07e-07,2;UBERON:0001016,9.00e-07,89;UBERON:0001875,9.54e-07,2;UBERON:0006514,9.54e-07,2|phase1_expression=0,0,0,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0.43917392846563,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0,0.252433774244115,0,0.323292113637624,0,0.10075209822764,0,0,0.272746120590835,0.286804595389004,0.609868530647977,0.132529768321485,0,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0,0,0,0,0,0,0.562677665642051,0,0.16480387422676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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24204 | |||
|TSSclassifier=S | |||
|UniProt=B4DKR4 | |||
|association_with_transcript=9bp_to_ENST00000358439_5end | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_3_at_EFCAB6_5end | |||
|id=chr22:44208092..44208107,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002535;5.11e-07;2!CL:0000047;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,5.11e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;8.28e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.00e-21!57;UBERON:0005068!3.00e-21!57;UBERON:0006241!3.00e-21!57;UBERON:0007135!3.00e-21!57;UBERON:0005743!3.24e-20!86;UBERON:0001017!1.04e-19!82;UBERON:0000073!1.48e-19!94;UBERON:0001016!1.48e-19!94;UBERON:0003080!4.79e-18!42;UBERON:0002616!1.57e-17!59;UBERON:0002020!1.95e-17!34;UBERON:0003528!1.95e-17!34;UBERON:0001869!3.19e-17!32;UBERON:0001893!3.64e-17!34;UBERON:0002780!4.05e-17!41;UBERON:0001890!4.05e-17!41;UBERON:0006240!4.05e-17!41;UBERON:0002791!2.53e-16!33;UBERON:0000955!1.05e-15!69;UBERON:0006238!1.05e-15!69;UBERON:0002346!3.03e-15!90;UBERON:0003075!7.46e-15!86;UBERON:0007284!7.46e-15!86;UBERON:0003056!4.24e-14!61;UBERON:0007023!4.10e-13!115;UBERON:0000956!3.97e-11!25;UBERON:0000203!3.97e-11!25;UBERON:0000033!4.49e-11!123;UBERON:0000924!7.43e-11!173;UBERON:0006601!7.43e-11!173;UBERON:0004121!1.94e-10!169;UBERON:0002619!1.96e-10!22;UBERON:0000153!2.28e-10!129;UBERON:0007811!2.28e-10!129;UBERON:0001950!2.52e-10!20;UBERON:0002308!3.24e-08!9;UBERON:0000125!3.24e-08!9;UBERON:0002298!3.54e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.10e-23;2!UBERON:0002114;1.22e-15;2!UBERON:0003296;5.70e-12;4!UBERON:0010133;5.70e-12;4!UBERON:0002108;9.27e-10;4!UBERON:0002780;1.66e-07;41!UBERON:0001890;1.66e-07;41!UBERON:0001894;3.24e-07;7!UBERON:0009663;3.24e-07;7!UBERON:0006955;5.11e-07;2!UBERON:0004801;5.11e-07;2!UBERON:0001873;8.28e-07;2!UBERON:0001875;8.28e-07;2!UBERON:0006514;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.78e-23,2;UBERON:0002114,1.91e-15,2;UBERON:0003296,3.09e-12,4;UBERON:0010133,3.09e-12,4;UBERON:0002108,1.21e-09,4;UBERON:0000073,2.25e-09,53;UBERON:0002616,2.25e-09,53;UBERON:0002780,3.97e-09,41;UBERON:0001890,3.97e-09,41;UBERON:0003080,3.97e-09,41;UBERON:0006240,3.97e-09,41;UBERON:0001049,7.59e-09,56;UBERON:0005068,7.59e-09,56;UBERON:0006241,7.59e-09,56;UBERON:0007135,7.59e-09,56;UBERON:0001017,1.32e-07,81;UBERON:0001894,2.30e-07,7;UBERON:0006222,2.30e-07,7;UBERON:0009663,2.95e-07,7;UBERON:0000955,4.44e-07,68;UBERON:0006238,4.44e-07,68;UBERON:0006955,5.11e-07,2;UBERON:0004801,5.11e-07,2;UBERON:0001873,6.07e-07,2;UBERON:0010122,6.07e-07,2;UBERON:0001016,9.00e-07,89;UBERON:0001875,9.54e-07,2;UBERON:0006514,9.54e-07,2 | |||
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| |||
|short_description=p3@EFCAB6 | |||
}} |
Revision as of 12:17, 12 September 2013
Short description: | p3@EFCAB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_EFCAB6_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 9bp_to_ENST00000358439_5end |
EntrezGene: | EFCAB6 |
HGNC: | 24204 |
UniProt: | B4DKR4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 5.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.78e-23 | 2 |
duodenum | 1.91e-15 | 2 |
gland of diencephalon | 3.09e-12 | 4 |
neuroendocrine gland | 3.09e-12 | 4 |
small intestine | 1.21e-09 | 4 |
regional part of nervous system | 2.25e-09 | 53 |
regional part of brain | 2.25e-09 | 53 |
regional part of forebrain | 3.97e-09 | 41 |
forebrain | 3.97e-09 | 41 |
anterior neural tube | 3.97e-09 | 41 |
future forebrain | 3.97e-09 | 41 |
neural tube | 7.59e-09 | 56 |
neural rod | 7.59e-09 | 56 |
future spinal cord | 7.59e-09 | 56 |
neural keel | 7.59e-09 | 56 |
central nervous system | 1.32e-07 | 81 |
diencephalon | 2.30e-07 | 7 |
future diencephalon | 2.30e-07 | 7 |
telencephalic nucleus | 2.95e-07 | 7 |
brain | 4.44e-07 | 68 |
future brain | 4.44e-07 | 68 |
uterine epithelium | 5.11e-07 | 2 |
cervix epithelium | 5.11e-07 | 2 |
caudate nucleus | 6.07e-07 | 2 |
future caudate nucleus | 6.07e-07 | 2 |
nervous system | 9.00e-07 | 89 |
globus pallidus | 9.54e-07 | 2 |
pallidum | 9.54e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.