FFCP PHASE1:Hg19::chr19:41094612..41094654,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:41094612..41094654,+ | |||
|id=chr19:41094612..41094654,+ | |||
|ontology_enrichment_celltype=CL:0000548!2.59e-15!679;CL:0000004!2.59e-15!679;CL:0000255!2.59e-15!679;CL:0000012!1.08e-14!682;CL:0002371!1.43e-14!591;CL:0002139!8.97e-14!24;CL:0000144!1.00e-13!625;CL:0000066!1.79e-13!254;CL:0000063!2.28e-13!578;CL:0000115!2.99e-13!35;CL:0002078!5.63e-12!44;CL:0000213!1.70e-11!57;CL:0000215!1.70e-11!57;CL:1000449!5.51e-11!16;CL:0000071!6.54e-11!18;CL:0002546!6.54e-11!18;CL:0000076!7.94e-11!62;CL:0000220!1.29e-10!246;CL:0002321!3.43e-10!248;CL:0000003!6.15e-10!722;CL:0002681!2.89e-09!13;CL:0002584!2.89e-09!13;CL:1000497!8.03e-09!18;CL:0002518!8.03e-09!18;CL:1000507!1.10e-08!12;CL:1000494!1.10e-08!12;CL:1000413!2.04e-07!9;CL:0000222!9.70e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.27e-23;24!CL:0000115;2.99e-20;36!CL:0000071;1.21e-19;18!CL:0002078;2.30e-15;45!CL:1000449;1.56e-13;15!CL:1000413;1.98e-12;9!CL:0000213;2.86e-12;58!CL:0000215;2.86e-12;58!CL:0002681;4.19e-12;12!CL:0002584;4.19e-12;12!CL:1000497;1.75e-11;17!CL:0002518;1.75e-11;17!CL:1000507;1.14e-09;10!CL:1000494;1.14e-09;10!CL:0000076;4.06e-09;63!CL:0002543;1.02e-08;6!CL:0002544;1.80e-08;6!CL:1000746;5.43e-08;7!CL:1000612;5.43e-08;7!CL:0002559;1.92e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,8.11e-24,45;CL:0002139,1.59e-23,24;CL:0000115,1.67e-23,36;CL:0000213,2.00e-20,58;CL:0000215,2.00e-20,58;CL:0000071,5.64e-20,18;CL:0002546,5.64e-20,18;CL:0000066,4.38e-17,253;CL:0000076,4.15e-15,63;CL:1000449,1.57e-13,15;CL:1000413,1.26e-12,9;CL:0002681,4.27e-12,12;CL:0002584,4.27e-12,12;CL:0002321,1.10e-11,250;CL:0000222,1.13e-11,121;CL:1000497,1.76e-11,17;CL:0002518,1.76e-11,17;CL:1000507,1.20e-09,10;CL:1000494,1.20e-09,10;CL:0002543,8.40e-09,6;CL:0002544,1.12e-08,6;CL:1000746,5.43e-08,7;CL:1000612,5.43e-08,7;CL:0002559,1.46e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;1.21e-19;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004211!5.51e-11!16;UBERON:0001285!5.51e-11!16;UBERON:0007684!5.51e-11!16;UBERON:0003220!5.51e-11!16;UBERON:0004208!5.51e-11!16;UBERON:0001986!6.54e-11!18;UBERON:0004638!6.54e-11!18;UBERON:0004852!6.54e-11!18;UBERON:0000080!7.18e-10!18;UBERON:0002120!7.18e-10!18;UBERON:0004875!7.18e-10!18;UBERON:0005721!7.18e-10!18;UBERON:0005754!7.18e-10!18;UBERON:0007297!7.18e-10!18;UBERON:0006555!7.87e-10!17;UBERON:0005103!7.87e-10!17;UBERON:0000083!7.87e-10!17;UBERON:0009201!7.87e-10!17;UBERON:0004819!7.87e-10!17;UBERON:0006553!7.87e-10!17;UBERON:0003074!7.87e-10!17;UBERON:0003060!7.87e-10!17;UBERON:0000487!1.29e-09!22;UBERON:0001225!2.89e-09!13;UBERON:0008987!2.89e-09!13;UBERON:0009773!1.10e-08!12;UBERON:0001231!1.10e-08!12;UBERON:0004810!1.10e-08!12;UBERON:0003887!2.39e-08!21;UBERON:0000058!2.47e-08!26;UBERON:0004876!4.93e-08!20;UBERON:0001851!1.40e-07!16;UBERON:0000353!1.95e-07!17;UBERON:0003915!2.04e-07!9;UBERON:0004700!2.04e-07!9;UBERON:0001917!2.04e-07!9;UBERON:0006914!2.39e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.21e-19;18!UBERON:0001986;1.21e-19;18!UBERON:0004852;1.21e-19;18!UBERON:0000487;4.79e-15;22!UBERON:0006555;1.56e-13;15!UBERON:0004819;1.56e-13;15!UBERON:0001285;1.56e-13;15!UBERON:0007684;1.56e-13;15!UBERON:0000490;9.17e-13;33!UBERON:0006914;1.37e-12;25!UBERON:0003915;1.98e-12;9!UBERON:0004700;1.98e-12;9!UBERON:0001917;1.98e-12;9!UBERON:0001225;4.19e-12;12!UBERON:0008987;4.19e-12;12!UBERON:0001851;1.15e-10;15!UBERON:0000353;1.15e-10;15!UBERON:0004211;1.14e-09;10!UBERON:0009773;1.14e-09;10!UBERON:0001231;1.14e-09;10!UBERON:0004810;1.14e-09;10!UBERON:0000074;5.43e-08;7!UBERON:0001229;5.43e-08;7!UBERON:0002073;1.92e-07;5!UBERON:0001473;2.14e-07;8!UBERON:0004536;2.14e-07;8!UBERON:0006558;2.14e-07;8!UBERON:0002113;4.48e-07;24!UBERON:0011143;4.48e-07;24!UBERON:0001638;5.63e-07;9!UBERON:0003920;5.63e-07;9!UBERON:0004582;5.63e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,5.64e-20,18;UBERON:0001986,5.64e-20,18;UBERON:0004852,5.64e-20,18;UBERON:0000487,2.63e-15,22;UBERON:0004211,1.57e-13,15;UBERON:0009773,1.57e-13,15;UBERON:0001231,1.57e-13,15;UBERON:0001285,1.57e-13,15;UBERON:0007684,1.57e-13,15;UBERON:0004208,1.57e-13,15;UBERON:0006914,8.21e-13,25;UBERON:0003915,1.26e-12,9;UBERON:0004700,1.26e-12,9;UBERON:0001917,1.26e-12,9;UBERON:0006555,1.94e-12,16;UBERON:0004819,1.94e-12,16;UBERON:0001225,4.27e-12,12;UBERON:0008987,4.27e-12,12;UBERON:0001851,9.69e-11,15;UBERON:0000353,1.11e-10,15;UBERON:0004810,1.20e-09,10;UBERON:0010532,5.43e-08,7;UBERON:0000074,5.43e-08,7;UBERON:0001229,5.43e-08,7;UBERON:0001230,5.43e-08,7;UBERON:0003220,5.43e-08,7;UBERON:0005749,5.43e-08,7;UBERON:0004199,5.43e-08,7;UBERON:0004209,5.43e-08,7;UBERON:0004198,5.43e-08,7;UBERON:0002073,1.46e-07,5;UBERON:0005086,1.46e-07,5;UBERON:0001473,2.44e-07,8;UBERON:0004536,2.44e-07,8;UBERON:0006558,2.44e-07,8;UBERON:0001638,3.74e-07,9;UBERON:0003920,3.74e-07,9;UBERON:0004582,3.74e-07,9;UBERON:0005103,7.78e-07,8;UBERON:0000083,7.78e-07,8;UBERON:0009201,7.78e-07,8;UBERON:0006553,7.78e-07,8;UBERON:0003074,7.78e-07,8;UBERON:0003060,7.78e-07,8 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0.245733936501509,0.697801167972428,0.873765488520689,1.84636884759917,2.84662611808107,1.65698687863958,0,0.602694528023977,0,0,0.61560529038394,0.816002764977012,0.626909442956176,0,0.136874425072884,0.251085279189606,0.152826811495903,0.410502947249729,0,0.393364276848904,0,0.154816123316076,2.75826367343678,4.819294700452,2.58827807116751,0,0.142169232487422,0,0,0.601633342410425,0.217010870715852,0,0,0,0.726991193897824,0,1.4555043671269,0.697287110717054,0.411167888021826,0.309706370895104,0.575384784644301,0.768482119587302,0.47296445977717,0.689491361473237,0.645484683583826,0,1.31769637679823,2.72906150057846,0.674170453335254,0.918251677112708,0.641858054152187,0.639337125799041,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,1.13477044938228,0,1.00499466102697,1.5644487552606,0,0,0,1.26584954976354,0,0.425208599930087,0,0.112328631146495,0.150176892841506,0.16072558669708,0.285012743741249,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0.296573126324121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,1.34140171940727,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.43917392846563,0.130979075497713,1.09288586487763,0.370784442784429,0,0.174129737299267,0,0,0,0,1.98762407366705,6.02164216574287,10.0670745466202,2.82653970962005,20.9749718104953,9.90424950984243,4.17989933073621,3.87625138753993,3.20189636418039,2.00832367658802,1.61131726843659,0,2.4406205754817,8.45625084795498,5.67099363517232,3.39338967479503,6.73588117878509,5.74318550464943,4.5994991239765,5.69559395740877,4.76324534219059,0,3.87780264148325,4.36094052142534,0,0,0.132409180813219,0,0,0.560677600142307,2.1349799145941,0.98667019366864,0,2.42479209725439,0.817309515567294,0.302714855289863,0,0.70296429550139,0.936480230490962,2.2818872861778,0,0.939475989150119,1.45685649931318,1.68540968042698,0.408308342509787,3.0708579327942,0.413303124703062,0,0,1.82032272387605,7.18618141816238,1.5150250255866,1.50142223846357,0,1.31693286264251,2.14541457059314,0.901428353439581,0.113432183160021,0.89694817844431,0.427114777637135,0.423863802319124,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0.355009592516614,0.403008392910561,1.01736355386293,2.12586938479627,0.818238361772504,1.14721838155602,0,0,0.232387885739037,0.10366105501537,0,0,6.25798129319264,1.92972281457866,9.66944449467364,6.50115099244771,5.0531563716871,0,0,0,0.110293972732394,0,0,0,0,0,1.4763109092493,0,0.8231480226628,0,0,0,0.590789906681404,0,0.245976877086227,0,0.878002283269004,8.99214026060957,0.502644862058154,1.01847289674383,0.325808305310325,0,0,0,0.234817388471643,2.16549671641611,0.925971025153221,2.28304982681518,0,0,0.492434012174795,0,0.148631162288728,0.93733833986777,0.671928512795438,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0.063497894292169,1.52795370223311,0,1.71072446022705,0.411309970813294,0.600686115687835,0,0.672786506072164,0,0.66004457238855,0.517086863031111,3.57656445851882,5.071816515336,0.26593811658487,1.04007436911366,1.02882949704857,2.83698264046557,1.5985330740966,0,2.71310802695722,2.46972101034231,0.65147236858747,0,0.791951872933429,0,0,0.099972991182057,2.43247561282381,0.502257091432126,0,2.39624855491583,1.14861935834114,0,0.144781306667579,1.02738161275192,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,2.99161459204025,0,1.47229790062968,6.00204625271613,1.35632511849868,0,0,0.946214490203608,0,0.902838299183157,0,0,3.98535359121262,0.921845842708516,0.260650843404249,4.50342662164303,1.37257369524342,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,1.03850885836724,0.116210378459959,0.120859449591622,1.40354529212299,0.276242966807689,0.229628896329213,0.182091168006717,0.262248829918848,11.7311899355927,0.616122696835318,12.5495963068297,8.76835347919564,0.949964660035881,10.2360045663807,5.95327968467805,5.39789790255348,27.7609054842521,6.23176806350862,7.5253466078228,9.17554582962138,12.4661401339309,11.8653620002755,0.219259876645935,0,0,0.656029291399411,0.650756789328606,0.206082023295445,0,0,1.14853107599234,6.50060246036521,0,0.193341436584244,0.308097234229289,0,0.689182862422653,0.859361958946189,0,0.340906509664404,0.0890320356467374,0.991709492165869,2.69066094311149,0.765676274967505,0.30347334256665,0,0,0,0,0,0,0,0,0,1.89827654831236,2.09693213316207,4.09436466098134,1.28381696410176,0,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0,0,0,1.31178950409327,0,0,0.281695602532241,0.717056761020258,1.96498082026242,0.35667105148125,0,0,0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| |||
|short_description=p@chr19:41094612..41094654,+ | |||
}} |
Revision as of 20:42, 11 September 2013
Short description: | p@chr19:41094612..41094654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41094612..41094654, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 8.11e-24 | 45 |
endothelial cell of vascular tree | 1.59e-23 | 24 |
endothelial cell | 1.67e-23 | 36 |
lining cell | 2.00e-20 | 58 |
barrier cell | 2.00e-20 | 58 |
blood vessel endothelial cell | 5.64e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.64e-20 | 18 |
epithelial cell | 4.38e-17 | 253 |
squamous epithelial cell | 4.15e-15 | 63 |
epithelial cell of nephron | 1.57e-13 | 15 |
endothelial cell of artery | 1.26e-12 | 9 |
kidney cortical cell | 4.27e-12 | 12 |
renal cortical epithelial cell | 4.27e-12 | 12 |
embryonic cell | 1.10e-11 | 250 |
mesodermal cell | 1.13e-11 | 121 |
kidney cell | 1.76e-11 | 17 |
kidney epithelial cell | 1.76e-11 | 17 |
kidney tubule cell | 1.20e-09 | 10 |
nephron tubule epithelial cell | 1.20e-09 | 10 |
vein endothelial cell | 8.40e-09 | 6 |
aortic endothelial cell | 1.12e-08 | 6 |
glomerular cell | 5.43e-08 | 7 |
kidney corpuscule cell | 5.43e-08 | 7 |
hair follicle cell | 1.46e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.