FFCP PHASE1:Hg19::chr19:1286097..1286145,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1943|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3222|TSSclassifier=S|UniProt=O43921|association_with_transcript=-7bp_to_NM_001405_5end|coexpression_cluster_id=C25|description=CAGE_peak_1_at_EFNA2_5end|id=chr19:1286097..1286145,+|ontology_enrichment_celltype=CL:0002319!6.96e-07!25|ontology_enrichment_celltype_v019=CL:0000182;6.10e-10;12!CL:0000064;8.93e-09;3!CL:0000067;8.93e-09;3!CL:0005012;8.93e-09;3!CL:0002304;8.93e-09;3!CL:0002322;5.27e-08;5!CL:0000075;1.41e-07;27!CL:0002319;2.70e-07;25|ontology_enrichment_celltype_v019_2=CL:0000182,7.06e-10,12;CL:0000133,9.54e-09,59;CL:0000064,9.58e-09,3;CL:0000067,9.58e-09,3;CL:0005012,9.58e-09,3;CL:0002304,9.58e-09,3;CL:0002322,6.11e-08,5;CL:0000075,1.14e-07,27;CL:0002319,2.87e-07,25;CL:0000306,9.97e-07,4;CL:0002222,9.97e-07,4;CL:0002224,9.97e-07,4|ontology_enrichment_development_v019=UBERON:0004161;7.14e-11;11!UBERON:0009497;5.04e-09;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005743!4.15e-34!86;UBERON:0000073!2.39e-33!94;UBERON:0001016!2.39e-33!94;UBERON:0001017!9.52e-32!82;UBERON:0003075!2.54e-29!86;UBERON:0007284!2.54e-29!86;UBERON:0002346!6.03e-29!90;UBERON:0001049!1.65e-26!57;UBERON:0005068!1.65e-26!57;UBERON:0006241!1.65e-26!57;UBERON:0007135!1.65e-26!57;UBERON:0000955!1.19e-24!69;UBERON:0006238!1.19e-24!69;UBERON:0002616!4.87e-23!59;UBERON:0003056!4.38e-21!61;UBERON:0000924!2.69e-20!173;UBERON:0006601!2.69e-20!173;UBERON:0004121!3.57e-20!169;UBERON:0000033!3.19e-19!123;UBERON:0002780!9.63e-19!41;UBERON:0001890!9.63e-19!41;UBERON:0006240!9.63e-19!41;UBERON:0000153!1.39e-18!129;UBERON:0007811!1.39e-18!129;UBERON:0003080!5.51e-18!42;UBERON:0002020!6.42e-18!34;UBERON:0003528!6.42e-18!34;UBERON:0001893!1.41e-17!34;UBERON:0002791!3.34e-17!33;UBERON:0001869!2.35e-16!32;UBERON:0000956!9.27e-14!25;UBERON:0000203!9.27e-14!25;UBERON:0001950!3.11e-12!20;UBERON:0002619!5.64e-12!22;UBERON:0000481!1.46e-10!347;UBERON:0000064!3.11e-10!219;UBERON:0007023!5.15e-10!115;UBERON:0003076!7.64e-10!15;UBERON:0003057!7.64e-10!15;UBERON:0000922!4.23e-09!612;UBERON:0004732!2.01e-08!13;UBERON:0000062!3.66e-08!511;UBERON:0007625!7.90e-08!11;UBERON:0004733!1.13e-07!12;UBERON:0002028!1.13e-07!12;UBERON:0007277!1.13e-07!12;UBERON:0000025!1.79e-07!194;UBERON:0000923!5.89e-07!604;UBERON:0005291!5.89e-07!604;UBERON:0006598!5.89e-07!604;UBERON:0002532!5.89e-07!604;UBERON:0002050!7.28e-07!605;UBERON:0005423!7.28e-07!605|ontology_enrichment_uberon_v019=UBERON:0000160;3.12e-19;17!UBERON:0005409;2.15e-14;22!UBERON:0007625;6.50e-11;11!UBERON:0000059;7.89e-11;11!UBERON:0002104;2.48e-10;21!UBERON:0000922;8.81e-10;49!UBERON:0002107;1.34e-09;19!UBERON:0006925;1.34e-09;19!UBERON:0002108;1.36e-09;4!UBERON:0000970;6.12e-09;20!UBERON:0001032;8.87e-09;24!UBERON:0004456;8.87e-09;24!UBERON:0001778;8.93e-09;3!UBERON:0001775;8.93e-09;3!UBERON:0002423;1.33e-08;25!UBERON:0004907;2.15e-08;5!UBERON:0004921;2.21e-08;33!UBERON:0000020;1.52e-07;23!UBERON:0000019;1.78e-07;19!UBERON:0000047;1.78e-07;19!UBERON:0004088;1.78e-07;19!UBERON:0010230;1.78e-07;19!UBERON:0001155;4.24e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.72e-19,17;UBERON:0011216,1.87e-16,223;UBERON:0001016,1.10e-13,89;UBERON:0003075,1.50e-13,82;UBERON:0007284,1.50e-13,82;UBERON:0001017,2.10e-13,81;UBERON:0002346,1.28e-12,86;UBERON:0005409,1.47e-12,25;UBERON:0000059,4.53e-11,11;UBERON:0007625,6.10e-11,11;UBERON:0000970,2.33e-10,21;UBERON:0002104,2.33e-10,21;UBERON:0003056,5.01e-10,61;UBERON:0002108,1.45e-09,4;UBERON:0002107,1.52e-09,19;UBERON:0006925,1.52e-09,19;UBERON:0008836,1.52e-09,19;UBERON:0010371,2.41e-09,104;UBERON:0009854,2.75e-09,23;UBERON:0004121,3.19e-09,171;UBERON:0000924,3.19e-09,171;UBERON:0006601,3.19e-09,171;UBERON:0000955,4.76e-09,68;UBERON:0006238,4.76e-09,68;UBERON:0000019,8.12e-09,20;UBERON:0000047,8.12e-09,20;UBERON:0010312,8.12e-09,20;UBERON:0004088,8.12e-09,20;UBERON:0010230,8.12e-09,20;UBERON:0003072,8.12e-09,20;UBERON:0004128,8.12e-09,20;UBERON:0003071,8.12e-09,20;UBERON:0000020,8.43e-09,24;UBERON:0001032,8.43e-09,24;UBERON:0004456,8.43e-09,24;UBERON:0001778,9.58e-09,3;UBERON:0001775,9.58e-09,3;UBERON:0009497,1.49e-08,25;UBERON:0000015,1.49e-08,25;UBERON:0002423,1.49e-08,25;UBERON:0006235,1.49e-08,25;UBERON:0004161,1.49e-08,25;UBERON:0004907,1.49e-08,5;UBERON:0001049,1.86e-08,56;UBERON:0005068,1.86e-08,56;UBERON:0006241,1.86e-08,56;UBERON:0007135,1.86e-08,56;UBERON:0008835,5.32e-08,22;UBERON:0003894,5.32e-08,22;UBERON:0009856,5.62e-08,26;UBERON:0001456,7.41e-08,22;UBERON:0001155,3.39e-07,9;UBERON:0003076,5.07e-07,15;UBERON:0003057,5.07e-07,15;UBERON:0000073,7.50e-07,53;UBERON:0002616,7.50e-07,53;UBERON:0007499,7.83e-07,25;UBERON:0010077,9.97e-07,4;UBERON:0005389,9.97e-07,4;UBERON:0000484,9.97e-07,4;UBERON:0002546,9.97e-07,4;UBERON:0000965,9.97e-07,4;UBERON:0001803,9.97e-07,4;UBERON:0003073,9.97e-07,4;UBERON:0005426,9.97e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3222 | |||
|TSSclassifier=S | |||
|UniProt=O43921 | |||
|association_with_transcript=-7bp_to_NM_001405_5end | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_EFNA2_5end | |||
|id=chr19:1286097..1286145,+ | |||
|ontology_enrichment_celltype=CL:0002319!6.96e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.10e-10;12!CL:0000064;8.93e-09;3!CL:0000067;8.93e-09;3!CL:0005012;8.93e-09;3!CL:0002304;8.93e-09;3!CL:0002322;5.27e-08;5!CL:0000075;1.41e-07;27!CL:0002319;2.70e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.06e-10,12;CL:0000133,9.54e-09,59;CL:0000064,9.58e-09,3;CL:0000067,9.58e-09,3;CL:0005012,9.58e-09,3;CL:0002304,9.58e-09,3;CL:0002322,6.11e-08,5;CL:0000075,1.14e-07,27;CL:0002319,2.87e-07,25;CL:0000306,9.97e-07,4;CL:0002222,9.97e-07,4;CL:0002224,9.97e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.14e-11;11!UBERON:0009497;5.04e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@EFNA2 | |||
}} |
Revision as of 18:48, 11 September 2013
Short description: | p1@EFNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_EFNA2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -7bp_to_NM_001405_5end |
EntrezGene: | EFNA2 |
HGNC: | 3222 |
UniProt: | O43921 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.06e-10 | 12 |
neurectodermal cell | 9.54e-09 | 59 |
ciliated cell | 9.58e-09 | 3 |
ciliated epithelial cell | 9.58e-09 | 3 |
multi-ciliated epithelial cell | 9.58e-09 | 3 |
non-pigmented ciliary epithelial cell | 9.58e-09 | 3 |
embryonic stem cell | 6.11e-08 | 5 |
columnar/cuboidal epithelial cell | 1.14e-07 | 27 |
neural cell | 2.87e-07 | 25 |
crystallin accumulating cell | 9.97e-07 | 4 |
vertebrate lens cell | 9.97e-07 | 4 |
lens epithelial cell | 9.97e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.