FFCP PHASE1:Hg19::chr16:86547162..86547166,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1770|description=CAGE_peak_at_chr16:86547162..86547166,+|id=chr16:86547162..86547166,+|ontology_enrichment_celltype=CL:0000192!4.88e-13!42;CL:0000514!4.88e-13!42;CL:0000055!2.24e-11!180;CL:0000183!4.59e-11!59;CL:0000187!9.97e-10!54;CL:0000680!1.11e-08!57;CL:0000056!1.11e-08!57;CL:0000355!1.11e-08!57;CL:0000393!2.59e-08!60;CL:0000211!2.59e-08!60|ontology_enrichment_celltype_v019=CL:0002622;2.73e-09;3!CL:0002504;9.64e-09;3!CL:1000279;9.64e-09;3!CL:1000280;9.64e-09;3|ontology_enrichment_celltype_v019_2=CL:0002622,2.40e-09,3;CL:0002504,7.57e-09,3;CL:1000279,7.57e-09,3;CL:1000280,7.57e-09,3;CL:0000192,1.81e-08,43;CL:0000514,1.81e-08,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;5.30e-07;2|ontology_enrichment_disease_v019_2=DOID:3307,5.32e-07,2|ontology_enrichment_uberon=UBERON:0000481!5.25e-13!347;UBERON:0001135!1.16e-10!15;UBERON:0000475!7.47e-10!365;UBERON:0005256!1.11e-09!143;UBERON:0000914!1.14e-09!83;UBERON:0002329!1.14e-09!83;UBERON:0003077!1.14e-09!83;UBERON:0003059!1.14e-09!83;UBERON:0007282!1.14e-09!83;UBERON:0009618!1.14e-09!83;UBERON:0007285!1.14e-09!83;UBERON:0002385!1.94e-08!63;UBERON:0001015!1.94e-08!63;UBERON:0000383!1.94e-08!63;UBERON:0000477!1.13e-07!286;UBERON:0001134!1.76e-07!61;UBERON:0002036!1.76e-07!61;UBERON:0003082!1.76e-07!61;UBERON:0002100!3.03e-07!216;UBERON:0001007!4.89e-07!155;UBERON:0001555!4.89e-07!155;UBERON:0007026!4.89e-07!155;UBERON:0003104!5.68e-07!238;UBERON:0009142!5.68e-07!238|ontology_enrichment_uberon_v019=UBERON:0000160;1.92e-15;17!UBERON:0000059;5.10e-14;11!UBERON:0005409;5.57e-14;22!UBERON:0001155;3.55e-13;9!UBERON:0003937;2.66e-10;12!UBERON:0005399;2.66e-10;12!UBERON:0001555;1.15e-09;54!UBERON:0004921;1.31e-09;33!UBERON:0002367;1.24e-08;11!UBERON:0010147;1.24e-08;11!UBERON:0000075;1.32e-08;16!UBERON:0001135;1.37e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.07e-18,145;UBERON:0001555,4.07e-18,145;UBERON:0007026,4.07e-18,145;UBERON:0004119,1.90e-16,160;UBERON:0000925,1.90e-16,160;UBERON:0006595,1.90e-16,160;UBERON:0000160,9.24e-16,17;UBERON:0000059,2.95e-14,11;UBERON:0001155,2.02e-13,9;UBERON:0004921,6.31e-13,118;UBERON:0005409,2.93e-12,25;UBERON:0003937,2.88e-10,12;UBERON:0005399,2.88e-10,12;UBERON:0001046,5.75e-10,19;UBERON:0003104,1.66e-09,160;UBERON:0009142,1.66e-09,160;UBERON:0000162,9.33e-09,14;UBERON:0001353,9.33e-09,14;UBERON:0000163,9.33e-09,14;UBERON:0006866,9.33e-09,14;UBERON:0000164,9.33e-09,14;UBERON:0000931,9.33e-09,14;UBERON:0002367,1.26e-08,11;UBERON:0010147,1.26e-08,11;UBERON:0009846,1.26e-08,11;UBERON:0003353,1.26e-08,11;UBERON:0004902,1.26e-08,11;UBERON:0003820,1.26e-08,11;UBERON:0009847,1.26e-08,11;UBERON:0011216,1.72e-08,223;UBERON:0000075,1.86e-08,16;UBERON:0004122,4.30e-08,15;UBERON:0001444,5.34e-08,49;UBERON:0001135,1.13e-07,15;UBERON:0005157,1.23e-07,47;UBERON:0000033,1.43e-07,56;UBERON:0005256,1.45e-07,122;UBERON:0011137,1.69e-07,14;UBERON:0000161,7.28e-07,36|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,2.21160542851358,0,0,0,0.618831764800233,2.65117900582333,2.6893005858071,4.82155622419182,0.730310090387373,1.46379839637152,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.886917589850256,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.794455084879313,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,2.7023549808589,0.103325781175765,3.56400857184616,7.66527480763526,0,2.15585442544872,1.5150250255866,0.625592599359821,0.277064115484183,1.31693286264251,1.22595118319608,2.85452311922534,0,0.538168907066586,0.213557388818567,0,0,0.721367704669072,0.257640540045629,0,0.168776332241266,0,0,0.368199594569197,0.484938170456436,0,0.302256294682921,0.67824236924195,0,0,0,0,0,0.69716365721711,0,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0,1.02940686179115,0,0,0,0,1.3032332212413,4.15973914111831,2.88662684050547,0.695582429850461,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0.26593811658487,0,0,0,0,5.43316375900961,0,0,0,3.55391948742546,1.58390374586686,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,0,1.247825169184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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1770 | |||
|description=CAGE_peak_at_chr16:86547162..86547166,+ | |||
|id=chr16:86547162..86547166,+ | |||
|ontology_enrichment_celltype=CL:0000192!4.88e-13!42;CL:0000514!4.88e-13!42;CL:0000055!2.24e-11!180;CL:0000183!4.59e-11!59;CL:0000187!9.97e-10!54;CL:0000680!1.11e-08!57;CL:0000056!1.11e-08!57;CL:0000355!1.11e-08!57;CL:0000393!2.59e-08!60;CL:0000211!2.59e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0002622;2.73e-09;3!CL:0002504;9.64e-09;3!CL:1000279;9.64e-09;3!CL:1000280;9.64e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,2.40e-09,3;CL:0002504,7.57e-09,3;CL:1000279,7.57e-09,3;CL:1000280,7.57e-09,3;CL:0000192,1.81e-08,43;CL:0000514,1.81e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.30e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,5.32e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000481!5.25e-13!347;UBERON:0001135!1.16e-10!15;UBERON:0000475!7.47e-10!365;UBERON:0005256!1.11e-09!143;UBERON:0000914!1.14e-09!83;UBERON:0002329!1.14e-09!83;UBERON:0003077!1.14e-09!83;UBERON:0003059!1.14e-09!83;UBERON:0007282!1.14e-09!83;UBERON:0009618!1.14e-09!83;UBERON:0007285!1.14e-09!83;UBERON:0002385!1.94e-08!63;UBERON:0001015!1.94e-08!63;UBERON:0000383!1.94e-08!63;UBERON:0000477!1.13e-07!286;UBERON:0001134!1.76e-07!61;UBERON:0002036!1.76e-07!61;UBERON:0003082!1.76e-07!61;UBERON:0002100!3.03e-07!216;UBERON:0001007!4.89e-07!155;UBERON:0001555!4.89e-07!155;UBERON:0007026!4.89e-07!155;UBERON:0003104!5.68e-07!238;UBERON:0009142!5.68e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.92e-15;17!UBERON:0000059;5.10e-14;11!UBERON:0005409;5.57e-14;22!UBERON:0001155;3.55e-13;9!UBERON:0003937;2.66e-10;12!UBERON:0005399;2.66e-10;12!UBERON:0001555;1.15e-09;54!UBERON:0004921;1.31e-09;33!UBERON:0002367;1.24e-08;11!UBERON:0010147;1.24e-08;11!UBERON:0000075;1.32e-08;16!UBERON:0001135;1.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.07e-18,145;UBERON:0001555,4.07e-18,145;UBERON:0007026,4.07e-18,145;UBERON:0004119,1.90e-16,160;UBERON:0000925,1.90e-16,160;UBERON:0006595,1.90e-16,160;UBERON:0000160,9.24e-16,17;UBERON:0000059,2.95e-14,11;UBERON:0001155,2.02e-13,9;UBERON:0004921,6.31e-13,118;UBERON:0005409,2.93e-12,25;UBERON:0003937,2.88e-10,12;UBERON:0005399,2.88e-10,12;UBERON:0001046,5.75e-10,19;UBERON:0003104,1.66e-09,160;UBERON:0009142,1.66e-09,160;UBERON:0000162,9.33e-09,14;UBERON:0001353,9.33e-09,14;UBERON:0000163,9.33e-09,14;UBERON:0006866,9.33e-09,14;UBERON:0000164,9.33e-09,14;UBERON:0000931,9.33e-09,14;UBERON:0002367,1.26e-08,11;UBERON:0010147,1.26e-08,11;UBERON:0009846,1.26e-08,11;UBERON:0003353,1.26e-08,11;UBERON:0004902,1.26e-08,11;UBERON:0003820,1.26e-08,11;UBERON:0009847,1.26e-08,11;UBERON:0011216,1.72e-08,223;UBERON:0000075,1.86e-08,16;UBERON:0004122,4.30e-08,15;UBERON:0001444,5.34e-08,49;UBERON:0001135,1.13e-07,15;UBERON:0005157,1.23e-07,47;UBERON:0000033,1.43e-07,56;UBERON:0005256,1.45e-07,122;UBERON:0011137,1.69e-07,14;UBERON:0000161,7.28e-07,36 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,2.21160542851358,0,0,0,0.618831764800233,2.65117900582333,2.6893005858071,4.82155622419182,0.730310090387373,1.46379839637152,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0.886917589850256,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71153252537342,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.794455084879313,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,2.7023549808589,0.103325781175765,3.56400857184616,7.66527480763526,0,2.15585442544872,1.5150250255866,0.625592599359821,0.277064115484183,1.31693286264251,1.22595118319608,2.85452311922534,0,0.538168907066586,0.213557388818567,0,0,0.721367704669072,0.257640540045629,0,0.168776332241266,0,0,0.368199594569197,0.484938170456436,0,0.302256294682921,0.67824236924195,0,0,0,0,0,0.69716365721711,0,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0.237270619111097,0.134831308160164,0.392442930250692,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0,1.02940686179115,0,0,0,0,1.3032332212413,4.15973914111831,2.88662684050547,0.695582429850461,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,1.55126058909333,0,0,0.26593811658487,0,0,0,0,5.43316375900961,0,0,0,3.55391948742546,1.58390374586686,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2269149171914,1.00034104211935,0,1.24782516918484,1.07057393278297,1.10391690523754,0.468565659970853,0,0,1.03473071292505,0,0,0.260650843404249,0.979005787313703,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,1.02341449813341,0.482561763430822,0,0.616838775210622,0,0.574890092096664,4.15403543346897,0.464841513839837,0,0,0,2.87036120411517,9.10455840033585,15.472680965212,0,0,0,0,0,0,0.510281115829547,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0.154048617114644,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0.532306030317022,0,0.37064843820784,0,0,0,0.38126038784765,1.27948895655667,0.855877976067841,0.318203247925937,0.78494864019923,4.67668389716618,4.94166653524899,1.53156123049392,0,0,0.421258456238981,3.90106991271672,1.94970791705028,0,3.54899769660763,4.94919011837995,1.13008116620243,1.10273068709225,0,0.876901770507525,0.578775534266688,1.9676842561399,0,0,0,0.860468113224309,0.392996164052485,0,0.709522128141196,0,0,1.13841952129715,2.79947776195986,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0.920418142519393,0,0,0,0,0,1.97286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.10893846351899,0,0.384751292518985,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,1.68069372556344,1.83309043480088,0.593042257361244,0.123563938946503,0.104421949505455,0.067401132980677,0,0.234264445725339,0,0,0.485560759068186,0.789168805698781,0,0.30607276163049,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0.438535902517113,0.0821154570532092,0.290967049465258,0,0,0,2.78200456384186,0,0,0,3.41524791582964,0,0,0,0,0,0,0,0.543616824294456,0.209205692624666,3.36594118199862,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0.0671834724867263,2.88239906833923,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0.896436696664224,0,0,0,0,1.62899880526114,1.72844298240254,0.653174720218818,0,0,0.170388021785422,1.35974509824151,0,0,0,0.26446520348538,0,0,1.49502377594773,1.72924735609633,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.443716206147409,0.18628920882415,0,0,0,0,4.23478475456709,0,0,0,0,0,0,0,0,0.457680136793847,0.302461847526478,0.15543720058278,0.147855149989634,1.27437413730962,0.449803112163605,0.155262956876259,0.414706207840855,0.53168342911599,1.5652351854352,0.150257608997218,0.761610424337591,0.406870733204662,0.363697318405119,0.537052785212442,0,0,0,0,0,3.78554694685953,0.770479321629213,0.428883182749851,0.521988583930423,0.453411851024545,0,0.97894681802587,0,0.617602894321944,0.219284049578707,0.353378291891762,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,2.46873160583479,33.3807570314988,0,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,1.42769420259154,0,0,0,0,0,2.0710797781803,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0,0,0,0.413373593002368,0,0,0,0.496211178389294,0,0,0,0.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| |||
|short_description=p@chr16:86547162..86547166,+ | |||
}} |
Revision as of 11:55, 11 September 2013
Short description: | p@chr16:86547162..86547166, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:86547162..86547166, + |
Coexpression cluster: | C1770_normal_sacrococcigeal_tridermal_Prostate_Smooth_rectum_smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 2.40e-09 | 3 |
enteric smooth muscle cell | 7.57e-09 | 3 |
smooth muscle cell of large intestine | 7.57e-09 | 3 |
smooth muscle cell of colon | 7.57e-09 | 3 |
smooth muscle cell | 1.81e-08 | 43 |
smooth muscle myoblast | 1.81e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
teratoma | 5.32e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.