FFCP PHASE1:Hg19::chr16:1728272..1728296,+: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90861 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14137 | |||
|TSSclassifier=S | |||
|UniProt=B4DLH4,Q9H910 | |||
|association_with_transcript=0bp_to_ENST00000382711,NM_144570,uc002cmg.2,uc010brt.2,uc010bru.2,uc010uvi.1,uc010uvj.1_5end | |||
|description=CAGE_peak_1_at_HN1L_5end | |||
|id=chr16:1728272..1728296,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.54e-58!254;CL:0002321!6.54e-27!248;CL:0000220!5.38e-26!246;CL:0000076!7.19e-14!62;CL:0000223!2.83e-11!59;CL:0000221!2.38e-10!71;CL:0002076!2.54e-10!43;CL:0000548!4.95e-10!679;CL:0000004!4.95e-10!679;CL:0000255!4.95e-10!679;CL:1000497!1.66e-09!18;CL:0002518!1.66e-09!18;CL:0000012!2.37e-09!682;CL:1000449!1.14e-08!16;CL:0000213!7.98e-08!57;CL:0000215!7.98e-08!57;CL:0000133!9.53e-08!59;CL:1000507!2.75e-07!12;CL:1000494!2.75e-07!12;CL:0002368!4.76e-07!13;CL:0002077!4.93e-07!33;CL:0002681!6.48e-07!13;CL:0002584!6.48e-07!13;CL:0000077!7.87e-07!19 | |||
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|ontology_enrichment_development_v019= | |||
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|ontology_enrichment_disease_v019=DOID:305;4.39e-07;106 | |||
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| |||
|short_description=p1@HN1L | |||
}} |
Revision as of 09:27, 11 September 2013
Short description: | p1@HN1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_HN1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000382711, NM_144570, uc002cmg.2, uc010brt.2, uc010bru.2, uc010uvi.1, uc010uvj.1_5end |
EntrezGene: | HN1L |
HGNC: | 14137 |
UniProt: | B4DLH4Q9H910 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.64e-59 | 253 |
embryonic cell | 4.90e-27 | 250 |
squamous epithelial cell | 2.30e-13 | 63 |
endodermal cell | 9.70e-12 | 58 |
endo-epithelial cell | 7.29e-11 | 42 |
kidney cell | 2.40e-10 | 17 |
kidney epithelial cell | 2.40e-10 | 17 |
ectodermal cell | 5.51e-10 | 72 |
epithelial cell of nephron | 1.60e-09 | 15 |
lining cell | 3.86e-08 | 58 |
barrier cell | 3.86e-08 | 58 |
kidney tubule cell | 7.38e-08 | 10 |
nephron tubule epithelial cell | 7.38e-08 | 10 |
neurectodermal cell | 9.53e-08 | 59 |
kidney cortical cell | 9.76e-08 | 12 |
renal cortical epithelial cell | 9.76e-08 | 12 |
respiratory epithelial cell | 4.76e-07 | 13 |
mesothelial cell | 7.87e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.58e-12 | 101 |
nephron epithelium | 1.60e-09 | 15 |
renal tubule | 1.60e-09 | 15 |
nephron tubule | 1.60e-09 | 15 |
nephron | 1.60e-09 | 15 |
uriniferous tubule | 1.60e-09 | 15 |
nephrogenic mesenchyme | 1.60e-09 | 15 |
cell layer | 3.52e-09 | 309 |
urinary system structure | 3.56e-09 | 47 |
cortex | 4.95e-09 | 15 |
renal system | 6.16e-09 | 48 |
epithelium | 1.56e-08 | 306 |
excretory tube | 1.68e-08 | 16 |
kidney epithelium | 1.68e-08 | 16 |
cavitated compound organ | 1.69e-08 | 31 |
endoderm-derived structure | 1.72e-08 | 160 |
endoderm | 1.72e-08 | 160 |
presumptive endoderm | 1.72e-08 | 160 |
abdomen element | 1.90e-08 | 54 |
abdominal segment element | 1.90e-08 | 54 |
kidney | 3.38e-08 | 26 |
kidney mesenchyme | 3.38e-08 | 26 |
upper urinary tract | 3.38e-08 | 26 |
kidney rudiment | 3.38e-08 | 26 |
kidney field | 3.38e-08 | 26 |
nephron tubule epithelium | 7.38e-08 | 10 |
subdivision of trunk | 8.03e-08 | 112 |
trunk | 9.19e-08 | 199 |
cortex of kidney | 9.76e-08 | 12 |
renal parenchyma | 9.76e-08 | 12 |
primordium | 1.01e-07 | 160 |
parenchyma | 1.77e-07 | 15 |
endo-epithelium | 6.57e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.64e-30 | 235 |
disease of cellular proliferation | 7.23e-29 | 239 |
cell type cancer | 3.60e-25 | 143 |
carcinoma | 5.33e-22 | 106 |
organ system cancer | 1.27e-10 | 137 |
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