FFCP PHASE1:Hg19::chr14:58798013..58798071,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5926|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9885|TSSclassifier=S|UniProt=|association_with_transcript=8bp_to_ENST00000417477_5end|coexpression_cluster_id=C3|description=CAGE_peak_2_at_ARID4A_5end|id=chr14:58798013..58798071,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;9.49e-07;2|ontology_enrichment_celltype_v019_2=CL:0000047,9.12e-09,8|ontology_enrichment_development_v019=UBERON:0006601;5.92e-23;82!UBERON:0006215;7.43e-10;3!UBERON:0006241;1.79e-08;3!UBERON:0003057;1.79e-08;3|ontology_enrichment_disease=DOID:171!1.24e-07!10|ontology_enrichment_disease_v019=DOID:171;4.39e-11;10!DOID:169;9.93e-07;6|ontology_enrichment_disease_v019_2=DOID:171,5.19e-11,10;DOID:169,9.70e-07,6|ontology_enrichment_uberon=UBERON:0001017!1.50e-53!82;UBERON:0001049!3.23e-52!57;UBERON:0005068!3.23e-52!57;UBERON:0006241!3.23e-52!57;UBERON:0007135!3.23e-52!57;UBERON:0000073!1.02e-51!94;UBERON:0001016!1.02e-51!94;UBERON:0005743!1.72e-51!86;UBERON:0000955!4.69e-46!69;UBERON:0006238!4.69e-46!69;UBERON:0002616!9.46e-45!59;UBERON:0002346!7.95e-43!90;UBERON:0002780!1.88e-41!41;UBERON:0001890!1.88e-41!41;UBERON:0006240!1.88e-41!41;UBERON:0003080!4.53e-40!42;UBERON:0003075!1.87e-39!86;UBERON:0007284!1.87e-39!86;UBERON:0002020!3.89e-34!34;UBERON:0003528!3.89e-34!34;UBERON:0001893!3.89e-34!34;UBERON:0002791!4.37e-33!33;UBERON:0001869!2.66e-32!32;UBERON:0003056!1.21e-30!61;UBERON:0007023!6.92e-30!115;UBERON:0000924!2.20e-28!173;UBERON:0006601!2.20e-28!173;UBERON:0000153!1.28e-27!129;UBERON:0007811!1.28e-27!129;UBERON:0000033!1.17e-26!123;UBERON:0004121!8.01e-26!169;UBERON:0000956!3.06e-25!25;UBERON:0000203!3.06e-25!25;UBERON:0002619!1.04e-23!22;UBERON:0001950!1.49e-21!20;UBERON:0003076!7.00e-13!15;UBERON:0003057!7.00e-13!15;UBERON:0002420!1.22e-10!9;UBERON:0007245!1.22e-10!9;UBERON:0010009!1.22e-10!9;UBERON:0010011!1.22e-10!9;UBERON:0000454!1.22e-10!9;UBERON:0002308!2.92e-10!9;UBERON:0000125!2.92e-10!9;UBERON:0004733!4.65e-10!12;UBERON:0002028!4.65e-10!12;UBERON:0007277!4.65e-10!12;UBERON:0004732!5.13e-09!13;UBERON:0000025!5.42e-09!194;UBERON:0001894!1.27e-08!7;UBERON:0006222!1.27e-08!7;UBERON:0009663!2.26e-08!7;UBERON:0000200!4.82e-08!6;UBERON:0001871!5.98e-08!7;UBERON:0002680!1.51e-07!9;UBERON:0001895!1.51e-07!9;UBERON:0010092!1.51e-07!9;UBERON:0000349!4.95e-07!5;UBERON:0001872!7.88e-07!5;UBERON:0002021!8.15e-07!5;UBERON:0002298!9.46e-07!8|ontology_enrichment_uberon_v019=UBERON:0002780;2.21e-61;41!UBERON:0001890;2.21e-61;41!UBERON:0001893;1.58e-58;34!UBERON:0003528;3.62e-58;34!UBERON:0002020;3.62e-58;34!UBERON:0001869;1.10e-57;32!UBERON:0002791;1.87e-57;32!UBERON:0000073;1.38e-55;53!UBERON:0002616;1.38e-55;53!UBERON:0002619;3.37e-55;22!UBERON:0001950;4.97e-50;20!UBERON:0000956;4.59e-48;25!UBERON:0000203;4.59e-48;25!UBERON:0001017;5.27e-37;75!UBERON:0001016;5.15e-36;83!UBERON:0000955;8.62e-36;68!UBERON:0002420;3.36e-23;9!UBERON:0007245;3.36e-23;9!UBERON:0010009;3.36e-23;9!UBERON:0010011;3.36e-23;9!UBERON:0000454;3.36e-23;9!UBERON:0000125;3.07e-22;9!UBERON:0002308;3.07e-22;9!UBERON:0001894;2.86e-18;7!UBERON:0009663;8.41e-18;7!UBERON:0000200;5.52e-17;6!UBERON:0001871;7.91e-15;6!UBERON:0000349;1.37e-14;5!UBERON:0001872;4.00e-14;5!UBERON:0007023;4.10e-14;114!UBERON:0002021;5.11e-14;5!UBERON:0004733;1.69e-13;12!UBERON:0002028;1.69e-13;12!UBERON:0011216;4.43e-13;132!UBERON:0004732;2.40e-12;13!UBERON:0003296;2.47e-11;4!UBERON:0010133;2.47e-11;4!UBERON:0000369;2.86e-11;4!UBERON:0002435;2.86e-11;4!UBERON:0000204;2.86e-11;4!UBERON:0002784;4.74e-11;4!UBERON:0002680;6.56e-11;9!UBERON:0001895;6.56e-11;9!UBERON:0002298;1.06e-10;6!UBERON:0001870;1.02e-09;3!UBERON:0005383;7.26e-09;3!UBERON:0005382;7.26e-09;3!UBERON:0000988;1.22e-08;3!UBERON:0002240;1.79e-08;3!UBERON:0005174;1.79e-08;3!UBERON:0001137;1.79e-08;3!UBERON:0002050;6.43e-08;5!UBERON:0005423;6.43e-08;5!UBERON:0010314;1.16e-07;132!UBERON:0004121;1.43e-07;165!UBERON:0002771;3.65e-07;2!UBERON:0001876;4.10e-07;2!UBERON:0002702;6.12e-07;2!UBERON:0001954;9.62e-07;2!UBERON:0003022;9.62e-07;2!UBERON:0002421;9.62e-07;2!UBERON:0002600;9.62e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.81e-105,56;UBERON:0005068,1.81e-105,56;UBERON:0006241,1.81e-105,56;UBERON:0007135,1.81e-105,56;UBERON:0001017,1.37e-99,81;UBERON:0001016,2.41e-98,89;UBERON:0000073,3.51e-98,53;UBERON:0002616,3.51e-98,53;UBERON:0002780,1.91e-86,41;UBERON:0001890,1.91e-86,41;UBERON:0003080,1.91e-86,41;UBERON:0006240,1.91e-86,41;UBERON:0000955,2.20e-83,68;UBERON:0006238,2.20e-83,68;UBERON:0002346,5.13e-73,86;UBERON:0003528,4.37e-69,34;UBERON:0002020,4.37e-69,34;UBERON:0001893,4.37e-69,34;UBERON:0003075,3.09e-68,82;UBERON:0007284,3.09e-68,82;UBERON:0001869,1.04e-64,32;UBERON:0002791,1.99e-64,32;UBERON:0002619,3.61e-55,22;UBERON:0003056,5.33e-55,61;UBERON:0010371,3.79e-51,104;UBERON:0004121,3.93e-50,171;UBERON:0000924,3.93e-50,171;UBERON:0006601,3.93e-50,171;UBERON:0001950,5.32e-50,20;UBERON:0000956,4.88e-48,25;UBERON:0000203,4.88e-48,25;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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5926 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9885 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=8bp_to_ENST00000417477_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_ARID4A_5end | |||
|id=chr14:58798013..58798071,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;9.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.12e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.92e-23;82!UBERON:0006215;7.43e-10;3!UBERON:0006241;1.79e-08;3!UBERON:0003057;1.79e-08;3 | |||
|ontology_enrichment_disease=DOID:171!1.24e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:171;4.39e-11;10!DOID:169;9.93e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,5.19e-11,10;DOID:169,9.70e-07,6 | |||
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| |||
|short_description=p2@ARID4A | |||
}} |
Revision as of 04:54, 11 September 2013
Short description: | p2@ARID4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ARID4A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 8bp_to_ENST00000417477_5end |
EntrezGene: | ARID4A |
HGNC: | 9885 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.12e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 5.19e-11 | 10 |
neuroendocrine tumor | 9.70e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.