FFCP PHASE1:Hg19::chr14:37126814..37126834,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5083|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8623|TSSclassifier=S|UniProt=|association_with_transcript=32bp_to_uc001wty.3_5end|coexpression_cluster_id=C1722|description=CAGE_peak_4_at_PAX9_5end|id=chr14:37126814..37126834,+|ontology_enrichment_celltype=CL:0002552!1.70e-12!5;CL:0002564!5.72e-12!3;CL:0000197!1.95e-10!6;CL:0000098!1.95e-10!6;CL:0002167!1.95e-10!6;CL:0002556!3.47e-10!6;CL:0002602!6.31e-09!2|ontology_enrichment_celltype_v019=CL:0002564;2.90e-21;3!CL:0000197;9.26e-19;6!CL:0000098;9.26e-19;6!CL:0002167;9.26e-19;6!CL:0002602;2.53e-15;2!CL:0002552;1.99e-13;5!CL:0002556;5.83e-11;6!CL:0002252;5.43e-08;1|ontology_enrichment_celltype_v019_2=CL:0002564,3.83e-21,3;CL:0000197,8.26e-19,6;CL:0000098,8.26e-19,6;CL:0002167,8.26e-19,6;CL:0002602,2.05e-15,2;CL:0002552,2.17e-13,5;CL:0002556,6.04e-11,6;CL:0002252,6.24e-08,1|ontology_enrichment_development_v019=UBERON:0008801;1.09e-08;1!UBERON:0009143;1.57e-08;1!UBERON:0003099;2.09e-08;1!UBERON:0003852;2.09e-08;1!UBERON:0006298;5.43e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000165!6.38e-34!28;UBERON:0000930!6.38e-34!28;UBERON:0000078!5.93e-27!18;UBERON:0000166!6.76e-23!21;UBERON:0001444!1.92e-20!48;UBERON:0003408!3.22e-17!10;UBERON:0000161!3.49e-17!35;UBERON:0001044!2.67e-15!6;UBERON:0003293!2.67e-15!6;UBERON:0003294!2.67e-15!6;UBERON:0010047!2.67e-15!6;UBERON:0000167!2.67e-15!6;UBERON:0001004!3.33e-15!72;UBERON:0000075!1.74e-13!13;UBERON:0005944!1.74e-13!13;UBERON:0004288!1.74e-13!13;UBERON:0003089!1.74e-13!13;UBERON:0001007!2.46e-13!155;UBERON:0001555!2.46e-13!155;UBERON:0007026!2.46e-13!155;UBERON:0004119!1.20e-12!169;UBERON:0000925!1.20e-12!169;UBERON:0006595!1.20e-12!169;UBERON:0002242!5.72e-12!3;UBERON:0003068!5.72e-12!3;UBERON:0002328!5.72e-12!3;UBERON:0004880!5.72e-12!3;UBERON:0006562!3.20e-11!11;UBERON:0003102!2.27e-10!95;UBERON:0001758!3.47e-10!6;UBERON:0003672!3.47e-10!6;UBERON:0000077!5.48e-10!130;UBERON:0001042!6.11e-09!10;UBERON:0009145!6.11e-09!10;UBERON:0009568!6.31e-09!2;UBERON:0002216!6.31e-09!2;UBERON:0002209!6.31e-09!2;UBERON:0002213!6.31e-09!2;UBERON:0004267!6.31e-09!2;UBERON:0006444!6.31e-09!2;UBERON:0001995!6.31e-09!2;UBERON:0004715!6.31e-09!2;UBERON:0004089!6.31e-09!2;UBERON:0001468!6.31e-09!2;UBERON:0001130!6.31e-09!2;UBERON:0001066!6.31e-09!2;UBERON:0001829!9.93e-09!2;UBERON:0003127!1.44e-08!2;UBERON:0003129!2.40e-08!11;UBERON:0000153!4.05e-08!129;UBERON:0007811!4.05e-08!129;UBERON:0001828!8.33e-08!8;UBERON:0004905!2.42e-07!5;UBERON:0000982!2.42e-07!5;UBERON:0004770!2.42e-07!5|ontology_enrichment_uberon_v019=UBERON:0011135;8.96e-35;5!UBERON:0002216;8.96e-35;5!UBERON:0011134;8.96e-35;5!UBERON:0002209;8.96e-35;5!UBERON:0002213;8.96e-35;5!UBERON:0007844;8.96e-35;5!UBERON:0011138;8.96e-35;5!UBERON:0001130;8.96e-35;5!UBERON:0001066;8.96e-35;5!UBERON:0001468;8.96e-35;5!UBERON:0000075;8.92e-34;16!UBERON:0000165;4.16e-28;28!UBERON:0004905;1.04e-21;8!UBERON:0000982;1.04e-21;8!UBERON:0004770;1.04e-21;8!UBERON:0002242;2.90e-21;3!UBERON:0000161;2.19e-17;19!UBERON:0000166;2.19e-17;19!UBERON:0004089;2.20e-15;2!UBERON:0006444;2.53e-15;2!UBERON:0001995;2.53e-15;2!UBERON:0004715;2.53e-15;2!UBERON:0000153;2.71e-15;54!UBERON:0001829;5.72e-15;2!UBERON:0003127;1.07e-14;2!UBERON:0001444;2.05e-13;48!UBERON:0007811;3.94e-13;52!UBERON:0001041;2.28e-12;14!UBERON:0000033;3.59e-12;50!UBERON:0001555;7.88e-12;54!UBERON:0001434;2.71e-11;36!UBERON:0001044;3.37e-11;6!UBERON:0003293;3.37e-11;6!UBERON:0003294;3.37e-11;6!UBERON:0010047;3.37e-11;6!UBERON:0003408;3.37e-11;6!UBERON:0000167;3.37e-11;6!UBERON:0001758;5.83e-11;6!UBERON:0003672;5.83e-11;6!UBERON:0002418;1.62e-10;3!UBERON:0004755;1.62e-10;3!UBERON:0011137;2.58e-10;11!UBERON:0010323;2.58e-10;11!UBERON:0001043;3.50e-10;3!UBERON:0003129;1.82e-09;7!UBERON:0004765;3.39e-09;26!UBERON:0001831;1.09e-08;1!UBERON:0001567;1.09e-08;1!UBERON:0001828;1.42e-08;8!UBERON:0005705;2.09e-08;1!UBERON:0008193;2.09e-08;1!UBERON:0010912;2.09e-08;1!UBERON:0002514;2.09e-08;1!UBERON:0003457;2.09e-08;1!UBERON:0008907;2.09e-08;1!UBERON:0008001;2.09e-08;1!UBERON:0007213;2.09e-08;1!UBERON:0009891;2.09e-08;1!UBERON:0007914;2.09e-08;1!UBERON:0007375;2.09e-08;1!UBERON:0003323;2.09e-08;1!UBERON:0010258;2.09e-08;1!UBERON:0005253;2.09e-08;1!UBERON:0007842;2.09e-08;1!UBERON:0002397;2.09e-08;1!UBERON:0003113;2.09e-08;1!UBERON:0003277;2.09e-08;1!UBERON:0001709;2.09e-08;1!UBERON:0002244;2.09e-08;1!UBERON:0005620;2.09e-08;1!UBERON:0010364;2.09e-08;1!UBERON:0004288;2.09e-08;1!UBERON:0002372;3.44e-08;1!UBERON:0001961;3.44e-08;1!UBERON:0001744;3.44e-08;1!UBERON:0001042;3.44e-08;1!UBERON:0001735;3.44e-08;1!UBERON:0001736;5.43e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0011135,9.62e-35,5;UBERON:0002216,9.62e-35,5;UBERON:0011134,9.62e-35,5;UBERON:0002209,9.62e-35,5;UBERON:0002213,9.62e-35,5;UBERON:0005856,9.62e-35,5;UBERON:0005866,9.62e-35,5;UBERON:0005863,9.62e-35,5;UBERON:0007844,9.62e-3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5083 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8623 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=32bp_to_uc001wty.3_5end | |||
|coexpression_cluster_id=C1722 | |||
|description=CAGE_peak_4_at_PAX9_5end | |||
|id=chr14:37126814..37126834,+ | |||
|ontology_enrichment_celltype=CL:0002552!1.70e-12!5;CL:0002564!5.72e-12!3;CL:0000197!1.95e-10!6;CL:0000098!1.95e-10!6;CL:0002167!1.95e-10!6;CL:0002556!3.47e-10!6;CL:0002602!6.31e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0002564;2.90e-21;3!CL:0000197;9.26e-19;6!CL:0000098;9.26e-19;6!CL:0002167;9.26e-19;6!CL:0002602;2.53e-15;2!CL:0002552;1.99e-13;5!CL:0002556;5.83e-11;6!CL:0002252;5.43e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,3.83e-21,3;CL:0000197,8.26e-19,6;CL:0000098,8.26e-19,6;CL:0002167,8.26e-19,6;CL:0002602,2.05e-15,2;CL:0002552,2.17e-13,5;CL:0002556,6.04e-11,6;CL:0002252,6.24e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.09e-08;1!UBERON:0009143;1.57e-08;1!UBERON:0003099;2.09e-08;1!UBERON:0003852;2.09e-08;1!UBERON:0006298;5.43e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p4@PAX9 | |||
}} |
Revision as of 04:29, 11 September 2013
Short description: | p4@PAX9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PAX9_5end |
Coexpression cluster: | C1722_Nucleus_Anulus_parotid_Fibroblast_salivary_Olfactory_trachea |
Association with transcript: | 32bp_to_uc001wty.3_5end |
EntrezGene: | PAX9 |
HGNC: | 8623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 3.83e-21 | 3 |
receptor cell | 8.26e-19 | 6 |
sensory epithelial cell | 8.26e-19 | 6 |
olfactory epithelial cell | 8.26e-19 | 6 |
annulus pulposus cell | 2.05e-15 | 2 |
fibroblast of gingiva | 2.17e-13 | 5 |
fibroblast of periodontium | 6.04e-11 | 6 |
epithelial cell of esophagus | 6.24e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.