FFCP PHASE1:Hg19::chr12:56881874..56881907,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=27165|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29570|TSSclassifier=S|UniProt=A8K0A6|association_with_transcript=0bp_to_ENST00000539272_5end|coexpression_cluster_id=C1364|description=CAGE_peak_4_at_GLS2_5end|id=chr12:56881874..56881907,-|ontology_enrichment_celltype=CL:0000223!1.29e-11!59;CL:0002076!2.28e-10!43;CL:0000066!2.49e-09!254;CL:0002251!2.97e-07!21|ontology_enrichment_celltype_v019=CL:0002322;8.44e-07;5|ontology_enrichment_celltype_v019_2=CL:0002322,6.27e-07,5;CL:0000223,8.23e-07,58|ontology_enrichment_development_v019=UBERON:0006601;1.40e-13;82|ontology_enrichment_disease=DOID:305!2.15e-11!106;DOID:0050687!1.98e-09!143|ontology_enrichment_disease_v019=DOID:1749;4.26e-07;14|ontology_enrichment_disease_v019_2=DOID:305,1.12e-08,106;DOID:1749,4.97e-07,14|ontology_enrichment_uberon=UBERON:0001049!8.34e-33!57;UBERON:0005068!8.34e-33!57;UBERON:0006241!8.34e-33!57;UBERON:0007135!8.34e-33!57;UBERON:0001017!8.60e-30!82;UBERON:0005743!1.78e-29!86;UBERON:0000073!2.00e-29!94;UBERON:0001016!2.00e-29!94;UBERON:0007023!6.64e-28!115;UBERON:0000955!2.77e-27!69;UBERON:0006238!2.77e-27!69;UBERON:0002780!7.75e-27!41;UBERON:0001890!7.75e-27!41;UBERON:0006240!7.75e-27!41;UBERON:0002616!2.82e-26!59;UBERON:0003080!8.26e-26!42;UBERON:0004121!3.27e-24!169;UBERON:0000924!7.41e-23!173;UBERON:0006601!7.41e-23!173;UBERON:0003075!4.00e-22!86;UBERON:0007284!4.00e-22!86;UBERON:0002020!5.10e-22!34;UBERON:0003528!5.10e-22!34;UBERON:0001893!1.38e-21!34;UBERON:0001869!4.19e-21!32;UBERON:0002791!1.03e-20!33;UBERON:0002346!3.91e-20!90;UBERON:0000033!4.60e-20!123;UBERON:0000153!7.82e-20!129;UBERON:0007811!7.82e-20!129;UBERON:0002619!9.27e-19!22;UBERON:0003056!4.42e-18!61;UBERON:0001950!1.29e-17!20;UBERON:0000956!1.89e-15!25;UBERON:0000203!1.89e-15!25;UBERON:0000475!1.49e-11!365;UBERON:0004111!2.12e-11!241;UBERON:0000062!8.54e-10!511;UBERON:0000025!9.79e-10!194;UBERON:0000064!3.28e-09!219;UBERON:0000483!4.23e-09!309;UBERON:0000119!1.03e-08!312;UBERON:0000481!1.22e-08!347;UBERON:0000922!1.89e-08!612;UBERON:0003076!3.87e-08!15;UBERON:0003057!3.87e-08!15;UBERON:0002308!3.99e-08!9;UBERON:0000125!3.99e-08!9;UBERON:0002420!6.84e-08!9;UBERON:0007245!6.84e-08!9;UBERON:0010009!6.84e-08!9;UBERON:0010011!6.84e-08!9;UBERON:0000454!6.84e-08!9;UBERON:0004119!1.11e-07!169;UBERON:0000925!1.11e-07!169;UBERON:0006595!1.11e-07!169;UBERON:0001871!1.70e-07!7;UBERON:0001007!3.36e-07!155;UBERON:0001555!3.36e-07!155;UBERON:0007026!3.36e-07!155;UBERON:0000200!5.16e-07!6;UBERON:0005177!5.54e-07!107;UBERON:0005911!7.19e-07!82;UBERON:0004921!7.44e-07!129;UBERON:0004185!7.44e-07!129;UBERON:0002050!7.62e-07!605;UBERON:0005423!7.62e-07!605;UBERON:0000477!8.37e-07!286|ontology_enrichment_uberon_v019=UBERON:0001869;8.45e-26;32!UBERON:0003528;6.97e-25;34!UBERON:0002020;6.97e-25;34!UBERON:0002780;9.49e-25;41!UBERON:0001890;9.49e-25;41!UBERON:0000073;5.79e-24;53!UBERON:0002616;5.79e-24;53!UBERON:0002791;8.78e-24;32!UBERON:0001893;1.83e-23;34!UBERON:0001950;6.08e-23;20!UBERON:0002619;8.10e-23;22!UBERON:0000956;1.86e-19;25!UBERON:0000203;1.86e-19;25!UBERON:0000955;2.80e-18;68!UBERON:0001017;2.49e-17;75!UBERON:0001016;1.79e-13;83!UBERON:0000125;3.15e-11;9!UBERON:0002308;3.15e-11;9!UBERON:0000200;7.18e-11;6!UBERON:0002420;8.71e-11;9!UBERON:0007245;8.71e-11;9!UBERON:0010009;8.71e-11;9!UBERON:0010011;8.71e-11;9!UBERON:0000454;8.71e-11;9!UBERON:0001894;1.66e-10;7!UBERON:0004733;1.93e-10;12!UBERON:0002028;1.93e-10;12!UBERON:0002298;8.53e-10;6!UBERON:0004732;1.83e-09;13!UBERON:0009663;2.53e-08;7!UBERON:0007023;3.42e-08;114!UBERON:0001871;5.22e-08;6!UBERON:0011216;1.85e-07;132!UBERON:0002365;2.89e-07;31!UBERON:0002330;2.89e-07;31!UBERON:0000369;2.91e-07;4!UBERON:0002435;2.91e-07;4!UBERON:0000204;2.91e-07;4!UBERON:0002680;4.63e-07;9!UBERON:0001895;4.63e-07;9!UBERON:0003296;7.58e-07;4!UBERON:0010133;7.58e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.73e-48,56;UBERON:0005068,1.73e-48,56;UBERON:0006241,1.73e-48,56;UBERON:0007135,1.73e-48,56;UBERON:0000073,8.87e-45,53;UBERON:0002616,8.87e-45,53;UBERON:0001017,3.05e-42,81;UBERON:0000955,1.32e-38,68;UBERON:0006238,1.32e-38,68;UBERON:0001016,2.25e-36,89;UBERON:0002780,2.73e-35,41;UBERON:0001890,2.73e-35,41;UBERON:0003080,2.73e-35,41;UBERON:0006240,2.73e-35,41;UBERON:0003075,1.71e-34,82;UBERON:0007284,1.71e-34,82;UBERON:0010371,2.32e-34,104;UBERON:0002346,3.68e-32,86;UBERON:0003528,4.02e-29,34;UBERON:0002020,4.02e-29,34;UBERON:0001869,7.75e-29,32;UBERON:0004121,2.70e-27,171;UBERON:0000924,2.70e-27,171;UBERON:0006601,2.70e-27,171;UBERON:0001893,1.13e-26,34;UBERON:0002791,2.65e-26,32;UBERON:0003056,3.74e-26,61;UBERON:0007023,6.40e-25,114;UBERON:0011216,2.90e-24,223;UBERON:0001950,5.19e-23,20;UBERON:0002619,6.16e-23,22;UBERON:0000956,1.47e-19,25;UBERON:0000203,1.47e-19,25;UBERON:0010314,1.94e-18,132;UBERON:0003076,6.21e-14,15;UBERON:0003057,6.21e-14,15;UBERON:0000025,9.97e-14,192;UBERON:0004111,1.41e-12,240;UBERON:0000125,3.08e-11,9;UBERON:0002308,3.08e-11,9;UBERON:0000200,6.80e-11,6;UBERON:0000483,7.17e-11,306;UBERON:0002420,7.23e-11,9;UBERON:0007245,7.23e-11,9;UBERON:0010009,7.23e-11,9;UBERON:0010011,7.23e-11,9;UBERON:0000454,7.23e-11,9;UBERON:0000119,1.41e-10,309;UBERON:0004733,1.81e-10,12;UBERON:0002028,1.81e-10,12;UBERON:0007277,1.81e-10,12;UBERON:0001894,2.17e-10,7;UBERON:0006222,2.17e-10,7;UBERON:0002298,7.74e-10,6;UBERON:0004732,1.73e-09,13;UBERON:0009663,2.45e-08,7;UBERON:0001871,4.66e-08,6;UBERON:0002365,1.92e-07,31;UBERON:0002330,1.92e-07,31;UBERON:0000922,2.03e-07,592;UBERON:0000369,2.92e-07,4;UBERON:0002435,2.92e-07,4;UBERON:0000204,2.92e-07,4;UBERON:0010082,2.92e-07,4;UBERON:0002680,4.71e-07,9;UBERON:0001895,4.71e-07,9;UBERON:0010092,4.71e-07,9;UBERON:0003296,9.66e-07,4;UBERON:0010133,9.66e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0,0,0,0.154816123316076,0,0.6024118375565,1.10926203050036,10.6904736800816,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0,0,0,0.444859689486181,0,0,0,0,0.34362744548263,0,0.637130828648193,0,0,0,0.511946444617674,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,1.09288586487763,2.59549109949101,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,2.31750041646231,1.72288698817931,2.32387885739037,1.96956004529204,3.28017106138317,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.6318125358591,1.96565443335525,11.8157981336281,0,2.09080345523293,0,0.439001141634502,1.1240175325762,1.10581869652794,1.38882667737794,0,0,0,0,0,0,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0.16798212819886,0.141775097242386,0.268675568108545,3.48760726216754,6.51750554580859,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0.920809889358963,0,0,0,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0.512900250232778,0,0,9.17065003664728,0,0.082509499920588,0.574265537996172,1.95018073810956,0,0,0,0,0,0,0,0,0,0.330569830721956,0.576570202095319,0.510450849978337,2.12431339796655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,0.670302275535787,1.08890984861323,7.06078505825844,0.43050537267123,1.68471475667626,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,0,0.961416640147258,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,7.67276215673701,0,0.36408156524854,0,0.284136146806413,0,0,0,3.97659059106519,4.3607519087259,0,0,5.27813520319984,0,0.276283915531148,3.02319297425131,0.20453736500431,0,0,0.359473404589307,0,0,0,0,0,4.84666373047609,6.49376687132959,1.99613798001194,0.260427761085233,1.48681999993533,0,10.5827906905515,1.01701460117107,0,3.79217710565611,0,0,7.08593108651071,6.15041836989581,10.6807215421958,15.259937870509,18.6194999940735,7.89787429754301,0,6.83176346965156,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,0.995261931078505,0.176915129006678,0,0,0,0,0.741412462787447,0,4.2167600230561,0,4.10895699757388,0,0.789168805698781,1.20990716048664,0.61214552326098,0.063186579628488,4.35937916302028,1.34794648816421,0,0,0,0,0,0,3.81831424337288,0,2.00236175134926,0.698906672968121,0,0,0,0,0.775912131907355,0.529536760149002,1.12990370390266,0,0,5.9512148198526,1.17330829640882,0.240476460754601,0.213452994739353,0.799238438328521,3.16998917739033,0.229073192331831,0,0,0,1.64985824231757,0,0,0,0,10.8075651967762,2.32739144116388,0,0,0,0,0,0,0.798716001995964,0,0,0,0,0,3.15132729228895,2.22522817629149,1.3480708770837,0.295282444544246,0,0.795229689809303,3.94989877723569,1.76828463311521,5.77665633708382,3.73896304226267,0.674921674654501,0,6.01420610914444,1.0063040627978,0.472834243795189,0.262272940674991,0,0.179287339332845,3.26255835443057,0,0,0,0,0,0,0,0,0,0.113312091520126,11.1379697595343,30.4765844498109,12.2818808543473,5.42153667145029,0,0.704815022316672,0.320362237703084,0,0.828478110694391,0,0,4.99349653361673,0.638341257770182,0,0,0,0,0,7.97461361970287,8.78589107294135,11.517565624998,3.44045517414043,3.77158775225298,3.47739856471747,0.553394539744923,0.874862855734746,0.151649117541648,0,0,0.936669811613763,3.4781046866598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62065732026684,0,0,0.308801447160972,0.65785214873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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=27165 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29570 | |||
|TSSclassifier=S | |||
|UniProt=A8K0A6 | |||
|association_with_transcript=0bp_to_ENST00000539272_5end | |||
|coexpression_cluster_id=C1364 | |||
|description=CAGE_peak_4_at_GLS2_5end | |||
|id=chr12:56881874..56881907,- | |||
|ontology_enrichment_celltype=CL:0000223!1.29e-11!59;CL:0002076!2.28e-10!43;CL:0000066!2.49e-09!254;CL:0002251!2.97e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,6.27e-07,5;CL:0000223,8.23e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.40e-13;82 | |||
|ontology_enrichment_disease=DOID:305!2.15e-11!106;DOID:0050687!1.98e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.26e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.12e-08,106;DOID:1749,4.97e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.34e-33!57;UBERON:0005068!8.34e-33!57;UBERON:0006241!8.34e-33!57;UBERON:0007135!8.34e-33!57;UBERON:0001017!8.60e-30!82;UBERON:0005743!1.78e-29!86;UBERON:0000073!2.00e-29!94;UBERON:0001016!2.00e-29!94;UBERON:0007023!6.64e-28!115;UBERON:0000955!2.77e-27!69;UBERON:0006238!2.77e-27!69;UBERON:0002780!7.75e-27!41;UBERON:0001890!7.75e-27!41;UBERON:0006240!7.75e-27!41;UBERON:0002616!2.82e-26!59;UBERON:0003080!8.26e-26!42;UBERON:0004121!3.27e-24!169;UBERON:0000924!7.41e-23!173;UBERON:0006601!7.41e-23!173;UBERON:0003075!4.00e-22!86;UBERON:0007284!4.00e-22!86;UBERON:0002020!5.10e-22!34;UBERON:0003528!5.10e-22!34;UBERON:0001893!1.38e-21!34;UBERON:0001869!4.19e-21!32;UBERON:0002791!1.03e-20!33;UBERON:0002346!3.91e-20!90;UBERON:0000033!4.60e-20!123;UBERON:0000153!7.82e-20!129;UBERON:0007811!7.82e-20!129;UBERON:0002619!9.27e-19!22;UBERON:0003056!4.42e-18!61;UBERON:0001950!1.29e-17!20;UBERON:0000956!1.89e-15!25;UBERON:0000203!1.89e-15!25;UBERON:0000475!1.49e-11!365;UBERON:0004111!2.12e-11!241;UBERON:0000062!8.54e-10!511;UBERON:0000025!9.79e-10!194;UBERON:0000064!3.28e-09!219;UBERON:0000483!4.23e-09!309;UBERON:0000119!1.03e-08!312;UBERON:0000481!1.22e-08!347;UBERON:0000922!1.89e-08!612;UBERON:0003076!3.87e-08!15;UBERON:0003057!3.87e-08!15;UBERON:0002308!3.99e-08!9;UBERON:0000125!3.99e-08!9;UBERON:0002420!6.84e-08!9;UBERON:0007245!6.84e-08!9;UBERON:0010009!6.84e-08!9;UBERON:0010011!6.84e-08!9;UBERON:0000454!6.84e-08!9;UBERON:0004119!1.11e-07!169;UBERON:0000925!1.11e-07!169;UBERON:0006595!1.11e-07!169;UBERON:0001871!1.70e-07!7;UBERON:0001007!3.36e-07!155;UBERON:0001555!3.36e-07!155;UBERON:0007026!3.36e-07!155;UBERON:0000200!5.16e-07!6;UBERON:0005177!5.54e-07!107;UBERON:0005911!7.19e-07!82;UBERON:0004921!7.44e-07!129;UBERON:0004185!7.44e-07!129;UBERON:0002050!7.62e-07!605;UBERON:0005423!7.62e-07!605;UBERON:0000477!8.37e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.45e-26;32!UBERON:0003528;6.97e-25;34!UBERON:0002020;6.97e-25;34!UBERON:0002780;9.49e-25;41!UBERON:0001890;9.49e-25;41!UBERON:0000073;5.79e-24;53!UBERON:0002616;5.79e-24;53!UBERON:0002791;8.78e-24;32!UBERON:0001893;1.83e-23;34!UBERON:0001950;6.08e-23;20!UBERON:0002619;8.10e-23;22!UBERON:0000956;1.86e-19;25!UBERON:0000203;1.86e-19;25!UBERON:0000955;2.80e-18;68!UBERON:0001017;2.49e-17;75!UBERON:0001016;1.79e-13;83!UBERON:0000125;3.15e-11;9!UBERON:0002308;3.15e-11;9!UBERON:0000200;7.18e-11;6!UBERON:0002420;8.71e-11;9!UBERON:0007245;8.71e-11;9!UBERON:0010009;8.71e-11;9!UBERON:0010011;8.71e-11;9!UBERON:0000454;8.71e-11;9!UBERON:0001894;1.66e-10;7!UBERON:0004733;1.93e-10;12!UBERON:0002028;1.93e-10;12!UBERON:0002298;8.53e-10;6!UBERON:0004732;1.83e-09;13!UBERON:0009663;2.53e-08;7!UBERON:0007023;3.42e-08;114!UBERON:0001871;5.22e-08;6!UBERON:0011216;1.85e-07;132!UBERON:0002365;2.89e-07;31!UBERON:0002330;2.89e-07;31!UBERON:0000369;2.91e-07;4!UBERON:0002435;2.91e-07;4!UBERON:0000204;2.91e-07;4!UBERON:0002680;4.63e-07;9!UBERON:0001895;4.63e-07;9!UBERON:0003296;7.58e-07;4!UBERON:0010133;7.58e-07;4 | |||
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| |||
|short_description=p4@GLS2 | |||
}} |
Revision as of 23:33, 10 September 2013
Short description: | p4@GLS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GLS2_5end |
Coexpression cluster: | C1364_Hepatocyte_liver_occipital_cerebellum_somatostatinoma_small_pancreas |
Association with transcript: | 0bp_to_ENST00000539272_5end |
EntrezGene: | GLS2 |
HGNC: | 29570 |
UniProt: | A8K0A6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 6.27e-07 | 5 |
endodermal cell | 8.23e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.12e-08 | 106 |
squamous cell carcinoma | 4.97e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.