FFCP PHASE1:Hg19::chr11:828151..828163,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=283229|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28703|TSSclassifier=W|UniProt=|association_with_transcript=-66bp_to_uc001lrv.2_5end|coexpression_cluster_id=C108|description=CAGE_peak_14_at_EFCAB4A_5end|id=chr11:828151..828163,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002327;6.50e-07;4|ontology_enrichment_celltype_v019_2=CL:0002327,6.50e-07,4|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;6.50e-07;4!DOID:1612;6.50e-07;4|ontology_enrichment_disease_v019_2=DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4|ontology_enrichment_uberon=UBERON:0000160!5.65e-17!27;UBERON:0000059!7.56e-17!11;UBERON:0005409!8.93e-13!35;UBERON:0004907!4.54e-10!5;UBERON:0001155!1.26e-09!9|ontology_enrichment_uberon_v019=UBERON:0000160;5.76e-20;17!UBERON:0002108;1.62e-18;4!UBERON:0005409;9.84e-16;22!UBERON:0004921;1.03e-09;33!UBERON:0000059;5.00e-09;11!UBERON:0002114;1.21e-08;2!UBERON:0001911;6.50e-07;4!UBERON:0001052;8.61e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.29e-20,17;UBERON:0002108,1.24e-18,4;UBERON:0005409,4.65e-14,25;UBERON:0000059,4.43e-09,11;UBERON:0002114,1.04e-08,2;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001052,7.27e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15741646340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2559799993799,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,0.973033209536731,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,1.23478652972711,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p14@EFCAB4A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=283229 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28703 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-66bp_to_uc001lrv.2_5end | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_14_at_EFCAB4A_5end | |||
|id=chr11:828151..828163,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;6.50e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,6.50e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.06e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;6.50e-07;4!DOID:1612;6.50e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,6.50e-07,4;DOID:1612,6.50e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000160!5.65e-17!27;UBERON:0000059!7.56e-17!11;UBERON:0005409!8.93e-13!35;UBERON:0004907!4.54e-10!5;UBERON:0001155!1.26e-09!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;5.76e-20;17!UBERON:0002108;1.62e-18;4!UBERON:0005409;9.84e-16;22!UBERON:0004921;1.03e-09;33!UBERON:0000059;5.00e-09;11!UBERON:0002114;1.21e-08;2!UBERON:0001911;6.50e-07;4!UBERON:0001052;8.61e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.29e-20,17;UBERON:0002108,1.24e-18,4;UBERON:0005409,4.65e-14,25;UBERON:0000059,4.43e-09,11;UBERON:0002114,1.04e-08,2;UBERON:0001911,6.50e-07,4;UBERON:0005333,6.50e-07,4;UBERON:0008425,6.50e-07,4;UBERON:0005311,6.50e-07,4;UBERON:0001052,7.27e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03664057770386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15741646340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2559799993799,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,0.973033209536731,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0.280272163313789,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,1.1598144313382,0,0,0.198950775161368,0,0,0,0,1.23478652972711,0.874238242015829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p14@EFCAB4A | |||
}} |
Revision as of 19:56, 10 September 2013
Short description: | p14@EFCAB4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_EFCAB4A_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | -66bp_to_uc001lrv.2_5end |
EntrezGene: | EFCAB4A |
HGNC: | 28703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.29e-20 | 17 |
small intestine | 1.24e-18 | 4 |
gastrointestinal system | 4.65e-14 | 25 |
large intestine | 4.43e-09 | 11 |
duodenum | 1.04e-08 | 2 |
mammary gland | 6.50e-07 | 4 |
mammary bud | 6.50e-07 | 4 |
mammary ridge | 6.50e-07 | 4 |
mammary placode | 6.50e-07 | 4 |
rectum | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 6.50e-07 | 4 |
breast cancer | 6.50e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.