Personal tools

FFCP PHASE1:Mm9::chr16:3976519..3976535,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|id=chr16:3976519..3976535,-
|id=chr16:3976519..3976535,-
|ontology_enrichment_celltype=CL:0000838!4.37e-08!12;CL:0000542!7.64e-08!13;CL:0000051!7.64e-08!13;CL:0000084!1.43e-07!11;CL:0000827!1.43e-07!11;CL:0000791!8.97e-07!9;CL:0000789!8.97e-07!9;CL:0002420!8.97e-07!9;CL:0002419!8.97e-07!9;CL:0000790!8.97e-07!9
|ontology_enrichment_celltype=CL:0000838!4.37e-08!12;CL:0000542!7.64e-08!13;CL:0000051!7.64e-08!13;CL:0000084!1.43e-07!11;CL:0000827!1.43e-07!11;CL:0000791!8.97e-07!9;CL:0000789!8.97e-07!9;CL:0002420!8.97e-07!9;CL:0002419!8.97e-07!9;CL:0000790!8.97e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,6.06e-13,12;CL:0000542,8.47e-12,13;CL:0000051,8.47e-12,13;CL:0000084,1.36e-11,11;CL:0000827,1.36e-11,11;CL:0000791,2.94e-11,9;CL:0000789,2.94e-11,9;CL:0002420,2.94e-11,9;CL:0002419,2.94e-11,9;CL:0000790,2.94e-11,9;CL:0002031,1.56e-09,25;CL:0000624,2.06e-09,8;CL:0000738,1.42e-08,17;CL:0002087,1.42e-08,17;CL:0000988,3.95e-08,32;CL:0002032,3.95e-08,32;CL:0000037,3.95e-08,32;CL:0000837,3.95e-08,32
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!8.67e-13!29;UBERON:0002370!1.03e-10!23;UBERON:0000974!1.03e-10!23;UBERON:0004807!1.03e-10!23;UBERON:0005058!1.03e-10!23;UBERON:0003351!1.03e-10!23;UBERON:0009113!1.03e-10!23;UBERON:0003295!1.03e-10!23;UBERON:0009722!1.03e-10!23;UBERON:0005562!1.03e-10!23;UBERON:0007690!1.03e-10!23;UBERON:0000065!2.71e-10!41;UBERON:0006562!8.20e-10!24;UBERON:0003408!8.20e-10!24;UBERON:0001557!8.20e-10!24;UBERON:0001042!8.20e-10!24;UBERON:0008814!8.20e-10!24;UBERON:0009145!8.20e-10!24;UBERON:0001004!1.09e-09!42;UBERON:0002193!4.16e-09!48;UBERON:0002390!2.98e-08!45;UBERON:0003061!2.98e-08!45;UBERON:0000072!1.40e-07!27
|ontology_enrichment_uberon=UBERON:0004177!8.67e-13!29;UBERON:0002370!1.03e-10!23;UBERON:0000974!1.03e-10!23;UBERON:0004807!1.03e-10!23;UBERON:0005058!1.03e-10!23;UBERON:0003351!1.03e-10!23;UBERON:0009113!1.03e-10!23;UBERON:0003295!1.03e-10!23;UBERON:0009722!1.03e-10!23;UBERON:0005562!1.03e-10!23;UBERON:0007690!1.03e-10!23;UBERON:0000065!2.71e-10!41;UBERON:0006562!8.20e-10!24;UBERON:0003408!8.20e-10!24;UBERON:0001557!8.20e-10!24;UBERON:0001042!8.20e-10!24;UBERON:0008814!8.20e-10!24;UBERON:0009145!8.20e-10!24;UBERON:0001004!1.09e-09!42;UBERON:0002193!4.16e-09!48;UBERON:0002390!2.98e-08!45;UBERON:0003061!2.98e-08!45;UBERON:0000072!1.40e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.21e-26,29;UBERON:0005057,1.21e-26,29;UBERON:0002370,4.97e-26,23;UBERON:0000974,4.97e-26,23;UBERON:0004807,4.97e-26,23;UBERON:0005058,4.97e-26,23;UBERON:0003351,4.97e-26,23;UBERON:0009113,4.97e-26,23;UBERON:0003295,4.97e-26,23;UBERON:0009722,4.97e-26,23;UBERON:0005562,4.97e-26,23;UBERON:0007690,4.97e-26,23;UBERON:0006562,9.69e-25,24;UBERON:0003408,9.69e-25,24;UBERON:0001557,9.69e-25,24;UBERON:0001042,9.69e-25,24;UBERON:0008814,9.69e-25,24;UBERON:0009145,9.69e-25,24;UBERON:0000077,2.69e-23,35;UBERON:0000072,1.91e-21,27;UBERON:0002193,6.36e-21,48;UBERON:0002405,6.36e-21,48;UBERON:0002390,1.15e-20,45;UBERON:0003061,1.15e-20,45;UBERON:0000065,1.43e-15,41;UBERON:0001004,4.48e-15,42;UBERON:0007811,7.06e-15,36;UBERON:0000153,1.08e-11,43;UBERON:0003929,3.29e-09,55;UBERON:0001041,9.77e-09,80;UBERON:0003081,1.29e-08,87;UBERON:0005911,4.15e-08,69;UBERON:0002368,4.72e-08,60;UBERON:0002530,4.41e-07,65;UBERON:0000490,6.60e-07,66
|phase1_expression=0,0,0,0,0,0,0,14.7200588723397,2.39340827657833,2.34064526321993,0.68487187290202,0.478632953972018,10.6144452557348,13.4627419725256,0,0.809901069559304,0,3.94327706697797,5.34746291062381,2.54633791078818,0.340173160604279,4.26951090163807,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,8.70434570413613,9.07453257684653,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0.285650984403804,0,0.244981598429908,0,0,0,0,0,0,0.365950574409639,0,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.43769555659061,0.593768556259299,0.693941307064543,0,0.230615497256059,0,0.470354828542819,0.753999547978053,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,2.63593273913025,0,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0,0.229902104433473,0,0,0.272145996605311,0.384341160854549,0.374806898238915,0,0,0.189106080167819,0,0.43839146485515,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0.697601834251224,0,0.817357396570186,0,0.985004784474571,0.891756905004413,0.292399974850665,0.219550115291051,0.268412837520744,0,0.411618449517138,1.65209391491899,0.528901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.648414149624083,0.398282546508734,0.569003702859245,1.14248512609729,0,1.22190796707189,0.193952487167626,0.98190147846446,0.948548056863859,0.885660887877613,0.784993639206874,1.35736880313981,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.744281895337007,1.5601883655728,0.252578877947112,0,0,0.739012760666419,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.952174563544055,0.975668239288994,0.472905432318573,0.44292937929755,2.23236676120482,0.655453258862952,1.20879487306127,0.723245292907558,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,1.26414703174326,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,1.87737366450968,0.21183207086382,0,0,0,0.120625849856312,0,0,0.291480836629851,0,1.53783792718067,1.03193433981611,0.555583582109135,0.188368457004691,1.50363650493128,0.915112692826091,4.75939603982795,6.43776680688827,6.08079884739465,0,0,0.203319467126849,0,0,0.218362563746178,0,0.330613822901344,0,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,6.32022241256356,1.21635129174099,2.56777392912068,2.85825810551149,2.68540043501222,4.56967115996909,9.13485416351763,6.4983391956814,8.07731599585181,9.29723041190998,6.957006774442,8.1864619821392,8.75527758926998,12.739582337791,0,1.10992976687032,3.58855426437903,0.671538465456314,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,1.38097570952153,0,0.859265911718438,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.347652977834566,0.38581844092741,1.23625770240992,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0
|phase1_expression=0,0,0,0,0,0,0,14.7200588723397,2.39340827657833,2.34064526321993,0.68487187290202,0.478632953972018,10.6144452557348,13.4627419725256,0,0.809901069559304,0,3.94327706697797,5.34746291062381,2.54633791078818,0.340173160604279,4.26951090163807,0.522399578277871,0.639969691173627,0.22940928106717,0,0,0,0.190023419456374,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34226084846189,8.70434570413613,9.07453257684653,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0.420649922702764,0.285650984403804,0,0.244981598429908,0,0,0,0,0,0,0.365950574409639,0,0,0,0,0.294628585473668,0.427115042397309,0.372798891650601,0.075726193333184,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.43769555659061,0.593768556259299,0.693941307064543,0,0.230615497256059,0,0.470354828542819,0.753999547978053,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0.969750506270444,0,0,0,0,2.63593273913025,0,0.762421362438388,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.497627882440372,0,0,0,0.229902104433473,0,0,0.272145996605311,0.384341160854549,0.374806898238915,0,0,0.189106080167819,0,0.43839146485515,0.556094498451196,0,0.205782136407943,0.59710280045548,0,0.257347907114715,0.284163499395593,0.207125772535502,0.234526059981096,0,0.473489471170421,0,0,0.697601834251224,0,0.817357396570186,0,0.985004784474571,0.891756905004413,0.292399974850665,0.219550115291051,0.268412837520744,0,0.411618449517138,1.65209391491899,0.528901133327089,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0.648414149624083,0.398282546508734,0.569003702859245,1.14248512609729,0,1.22190796707189,0.193952487167626,0.98190147846446,0.948548056863859,0.885660887877613,0.784993639206874,1.35736880313981,0,0,0.196558995113203,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0.744281895337007,1.5601883655728,0.252578877947112,0,0,0.739012760666419,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0.952174563544055,0.975668239288994,0.472905432318573,0.44292937929755,2.23236676120482,0.655453258862952,1.20879487306127,0.723245292907558,0,0,0,0.275936746304732,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.775284879504663,0,0,1.26414703174326,0,0,0,0.18006109403131,0.258717367565509,0.428674070063185,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,1.87737366450968,0.21183207086382,0,0,0,0.120625849856312,0,0,0.291480836629851,0,1.53783792718067,1.03193433981611,0.555583582109135,0.188368457004691,1.50363650493128,0.915112692826091,4.75939603982795,6.43776680688827,6.08079884739465,0,0,0.203319467126849,0,0,0.218362563746178,0,0.330613822901344,0,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0.104859344425711,0,0,6.32022241256356,1.21635129174099,2.56777392912068,2.85825810551149,2.68540043501222,4.56967115996909,9.13485416351763,6.4983391956814,8.07731599585181,9.29723041190998,6.957006774442,8.1864619821392,8.75527758926998,12.739582337791,0,1.10992976687032,3.58855426437903,0.671538465456314,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,1.38097570952153,0,0.859265911718438,0,0,0,0,0,0,0.103787347584177,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.0640251524048693,0.17230640686684,0,0.347652977834566,0.38581844092741,1.23625770240992,0.147198920134397,0.685738504770831,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.169229215783353,0,0,0.543216455383447,0.561142271657738,0.474540072496697,0.29551344712669,0.818462086339379,0.154936841185966,0.385813221962283,0,0.467863216890817,0.214871054048298,0,0,0
|short_description=p2@Nlrc3
|short_description=p2@Nlrc3
}}
}}

Revision as of 16:28, 14 November 2012

Short description:p2@Nlrc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nlrc3_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 19bp_to_ENSMUST00000163478_5end
EntrezGene:Nlrc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nlrc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.72
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.61
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.46
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I98.70
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.76
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.54
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.50
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C96.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.08
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I22.57
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F89.13
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C48.08
thymus, neonate N07.CNhs11211.713-19D39.30
thymus, neonate N10.CNhs11194.748-24E46.96
thymus, neonate N20.CNhs11186.820-7A28.19
thymus, neonate N25.CNhs11125.1362-25G78.76
thymus, neonate N30.CNhs11132.1393-42G212.74
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.59
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ1.21e-2629
immune organ1.21e-2629
thymus4.97e-2623
neck4.97e-2623
respiratory system epithelium4.97e-2623
hemolymphoid system gland4.97e-2623
pharyngeal epithelium4.97e-2623
thymic region4.97e-2623
pharyngeal gland4.97e-2623
entire pharyngeal arch endoderm4.97e-2623
thymus primordium4.97e-2623
early pharyngeal endoderm4.97e-2623
pharynx9.69e-2524
gland of gut9.69e-2524
upper respiratory tract9.69e-2524
chordate pharynx9.69e-2524
pharyngeal arch system9.69e-2524
pharyngeal region of foregut9.69e-2524
mixed endoderm/mesoderm-derived structure2.69e-2335
segment of respiratory tract1.91e-2127
hemolymphoid system6.36e-2148
immune system6.36e-2148
hematopoietic system1.15e-2045
blood island1.15e-2045
respiratory tract1.43e-1541
respiratory system4.48e-1542
craniocervical region7.06e-1536
anterior region of body1.08e-1143
gut epithelium3.29e-0955
foregut9.77e-0980
lateral plate mesoderm1.29e-0887
endo-epithelium4.15e-0869
endocrine gland4.72e-0860
gland4.41e-0765
unilaminar epithelium6.60e-0766







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr16:3976519..3976535,-&oldid=2329830"