FF:11327-117E4: Difference between revisions

Revision as of 20:38, 9 July 2012

Name:	Adipocyte - breast, donor2
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	breast
dev stage	40 years old adult
sex	female
age	40
cell type	adipocyte
cell line	NA
company	Zenbio
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	N/A
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.285
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.203
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	1.155
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0.0843
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	1.201
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.136
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.462
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0.0843
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0.613
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	0.376
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	1.027
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	0.566
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0.215
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0.0843
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0284
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	1.018
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.451
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.155
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0.337
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.883
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.343
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.497
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.686
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0.215
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.433
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0.215
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.9
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.946
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.497
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.95
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0.168
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.918
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11969

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.319
MA0003.1	MA0003.1	0.205
MA0004.1	MA0004.1	0.564
MA0006.1	MA0006.1	0.0823
MA0007.1	MA0007.1	0.303
MA0009.1	MA0009.1	0.427
MA0014.1	MA0014.1	0.618
MA0017.1	MA0017.1	0.638
MA0018.2	MA0018.2	6.38206e-6
MA0019.1	MA0019.1	0.22
MA0024.1	MA0024.1	0.00113
MA0025.1	MA0025.1	0.00463
MA0027.1	MA0027.1	0.687
MA0028.1	MA0028.1	0.00443
MA0029.1	MA0029.1	0.498
MA0030.1	MA0030.1	0.0587
MA0031.1	MA0031.1	0.117
MA0035.2	MA0035.2	0.0127
MA0038.1	MA0038.1	0.0722
MA0039.2	MA0039.2	0.0428
MA0040.1	MA0040.1	0.642
MA0041.1	MA0041.1	0.611
MA0042.1	MA0042.1	0.993
MA0043.1	MA0043.1	3.25716e-5
MA0046.1	MA0046.1	0.132
MA0047.2	MA0047.2	0.588
MA0048.1	MA0048.1	0.314
MA0050.1	MA0050.1	1.09709e-4
MA0051.1	MA0051.1	0.00783
MA0052.1	MA0052.1	0.237
MA0055.1	MA0055.1	0.911
MA0057.1	MA0057.1	0.187
MA0058.1	MA0058.1	0.481
MA0059.1	MA0059.1	0.781
MA0060.1	MA0060.1	5.46434e-5
MA0061.1	MA0061.1	0.00137
MA0062.2	MA0062.2	2.29566e-10
MA0065.2	MA0065.2	0.0519
MA0066.1	MA0066.1	0.376
MA0067.1	MA0067.1	0.0215
MA0068.1	MA0068.1	0.518
MA0069.1	MA0069.1	0.0169
MA0070.1	MA0070.1	0.903
MA0071.1	MA0071.1	0.252
MA0072.1	MA0072.1	0.842
MA0073.1	MA0073.1	0.861
MA0074.1	MA0074.1	0.477
MA0076.1	MA0076.1	9.82301e-5
MA0077.1	MA0077.1	0.612
MA0078.1	MA0078.1	0.533
MA0079.2	MA0079.2	0.49
MA0080.2	MA0080.2	1.07145e-7
MA0081.1	MA0081.1	0.0187
MA0083.1	MA0083.1	0.0584
MA0084.1	MA0084.1	0.96
MA0087.1	MA0087.1	0.809
MA0088.1	MA0088.1	0.696
MA0090.1	MA0090.1	0.00204
MA0091.1	MA0091.1	0.312
MA0092.1	MA0092.1	0.132
MA0093.1	MA0093.1	0.467
MA0099.2	MA0099.2	6.90014e-9
MA0100.1	MA0100.1	0.793
MA0101.1	MA0101.1	7.08948e-6
MA0102.2	MA0102.2	0.0536
MA0103.1	MA0103.1	0.00565
MA0104.2	MA0104.2	0.0373
MA0105.1	MA0105.1	0.0392
MA0106.1	MA0106.1	0.496
MA0107.1	MA0107.1	1.09344e-6
MA0108.2	MA0108.2	0.365
MA0111.1	MA0111.1	0.689
MA0112.2	MA0112.2	2.33419e-4
MA0113.1	MA0113.1	0.17
MA0114.1	MA0114.1	0.156
MA0115.1	MA0115.1	0.492
MA0116.1	MA0116.1	0.455
MA0117.1	MA0117.1	0.189
MA0119.1	MA0119.1	0.0949
MA0122.1	MA0122.1	0.534
MA0124.1	MA0124.1	0.19
MA0125.1	MA0125.1	0.292
MA0131.1	MA0131.1	0.211
MA0135.1	MA0135.1	0.306
MA0136.1	MA0136.1	4.79584e-12
MA0137.2	MA0137.2	0.927
MA0138.2	MA0138.2	0.0023
MA0139.1	MA0139.1	0.83
MA0140.1	MA0140.1	0.0481
MA0141.1	MA0141.1	0.198
MA0142.1	MA0142.1	0.247
MA0143.1	MA0143.1	0.439
MA0144.1	MA0144.1	0.438
MA0145.1	MA0145.1	0.135
MA0146.1	MA0146.1	0.414
MA0147.1	MA0147.1	0.0727
MA0148.1	MA0148.1	0.743
MA0149.1	MA0149.1	0.829
MA0150.1	MA0150.1	0.00379
MA0152.1	MA0152.1	0.0705
MA0153.1	MA0153.1	0.715
MA0154.1	MA0154.1	0.433
MA0155.1	MA0155.1	0.174
MA0156.1	MA0156.1	9.80243e-12
MA0157.1	MA0157.1	0.489
MA0159.1	MA0159.1	0.268
MA0160.1	MA0160.1	0.989
MA0162.1	MA0162.1	0.0609
MA0163.1	MA0163.1	0.246
MA0164.1	MA0164.1	0.917
MA0258.1	MA0258.1	0.139
MA0259.1	MA0259.1	0.191

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs11969

Novel motif	Logo	P-value
1	1	0.785
10	10	0.533
100	100	0.993
101	101	0.378
102	102	0.275
103	103	0.38
104	104	0.953
105	105	0.00657
106	106	0.0447
107	107	0.0789
108	108	0.148
109	109	0.771
11	11	0.9
110	110	0.738
111	111	0.306
112	112	0.345
113	113	0.332
114	114	0.409
115	115	8.59646e-4
116	116	0.121
117	117	0.512
118	118	0.429
119	119	0.737
12	12	0.575
120	120	0.645
121	121	0.578
122	122	0.087
123	123	0.0226
124	124	0.933
125	125	0.746
126	126	0.988
127	127	0.627
128	128	0.166
129	129	0.915
13	13	0.795
130	130	0.694
131	131	0.979
132	132	0.366
133	133	0.789
134	134	0.571
135	135	0.72
136	136	0.128
137	137	0.834
138	138	0.395
139	139	0.706
14	14	0.186
140	140	0.275
141	141	0.57
142	142	0.798
143	143	0.547
144	144	0.829
145	145	0.773
146	146	0.694
147	147	0.157
148	148	0.757
149	149	0.00524
15	15	0.703
150	150	0.432
151	151	0.581
152	152	0.0286
153	153	0.64
154	154	0.478
155	155	0.114
156	156	0.314
157	157	0.923
158	158	0.0121
159	159	0.559
16	16	0.0194
160	160	0.362
161	161	0.98
162	162	0.414
163	163	0.257
164	164	0.197
165	165	0.607
166	166	0.155
167	167	0.475
168	168	0.914
169	169	0.013
17	17	0.592
18	18	0.441
19	19	0.00148
2	2	0.225
20	20	0.435
21	21	0.156
22	22	0.134
23	23	0.411
24	24	0.272
25	25	0.403
26	26	0.354
27	27	0.352
28	28	0.118
29	29	0.861
3	3	0.906
30	30	0.471
31	31	0.48
32	32	4.99107e-11
33	33	0.556
34	34	0.852
35	35	0.844
36	36	0.0456
37	37	0.107
38	38	0.414
39	39	0.208
4	4	0.524
40	40	0.236
41	41	0.676
42	42	0.122
43	43	0.364
44	44	0.165
45	45	0.756
46	46	0.618
47	47	0.926
48	48	0.952
49	49	0.728
5	5	0.985
50	50	0.656
51	51	0.81
52	52	0.394
53	53	0.0597
54	54	0.88
55	55	0.485
56	56	0.583
57	57	0.974
58	58	0.524
59	59	0.105
6	6	0.244
60	60	0.511
61	61	0.468
62	62	0.898
63	63	0.396
64	64	0.695
65	65	0.623
66	66	0.175
67	67	0.755
68	68	0.303
69	69	0.849
7	7	0.631
70	70	0.937
71	71	0.379
72	72	0.375
73	73	0.00876
74	74	0.314
75	75	0.441
76	76	0.491
77	77	0.00934
78	78	0.858
79	79	0.00884
8	8	0.375
80	80	0.121
81	81	0.589
82	82	0.389
83	83	0.555
84	84	0.177
85	85	0.00845
86	86	0.482
87	87	0.0545
88	88	0.961
89	89	0.131
9	9	0.63
90	90	0.894
91	91	0.996
92	92	0.254
93	93	0.844
94	94	0.665
95	95	0.418
96	96	0.902
97	97	0.67
98	98	0.877
99	99	0.0242

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs11969

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000156 human adipocyte of breast sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002320 (connective tissue cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000136 (fat cell)
0002617 (adipocyte of breast)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000310 (breast)
0002100 (trunk)
0002384 (connective tissue)
0000479 (tissue)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0001062 (anatomical entity)
0009569 (subdivision of trunk)
0001443 (chest)
0000915 (thoracic segment of trunk)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000156 (human adipocyte of breast sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr11:47279504..47279563,+!p1@NR1H3!1.91!174.49!NR1H3;;chr12:54410664..54410684,+!p1@HOXC4,p1@HOXC5,p1@HOXC6!1.78!58.66!HOXC5;;chr1:170632285..170632309,+!p1@PRRX1!1.66!50.31!PRRX1;;chr12:54402745..54402788,+!p1@HOXC8!1.62!40.89!HOXC8;;chr7:73038839..73038862,-!p1@MLXIPL!1.57!36.18!MLXIPL;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.56!35.11!ZBED1;;chr19:33793430..33793447,-!p1@CEBPA!1.55!141.73!CEBPA;;chr7:19157248..19157268,-!p1@TWIST1!1.45!72.79!TWIST1;;chr5:158526917..158526932,-!p1@EBF1!1.39!58.02!EBF1;;chr15:42749722..42749739,-!p2@ZFP106!1.38!40.46!ZFP106;;chr3:12330560..12330579,+!p1@PPARG!1.35!24.62!PPARG;;chr4:174451370..174451387,-!p1@HAND2!1.33!20.55!HAND2;;chr19:47523058..47523114,+!p1@NPAS1!1.33!20.34!NPAS1;;chr2:119605214..119605230,-!p1@EN1!1.32!19.91!EN1;;chr2:239756671..239756732,+!p1@TWIST2!1.25!53.10!TWIST2;;chr3:126076242..126076257,-!p1@KLF15!1.25!20.77!KLF15;;chr9:132427883..132427951,+!p2@PRRX2!1.23!15.84!PRRX2;;chrX:106960180..106960197,-!p2@TSC22D3!1.22!59.31!TSC22D3;;chr11:113930425..113930471,+!p1@ZBTB16!1.22!22.48!ZBTB16;;chr12:54410639..54410659,+!p2@HOXC4,p2@HOXC5,p2@HOXC6!1.21!15.20!HOXC5;;chr12:54402790..54402805,+!p2@HOXC8!1.20!14.77!HOXC8;;chr17:46675469..46675481,-!p4@HOXB6!1.18!14.13!HOXB6;;chr17:17726907..17726958,-!p2@SREBF1!1.17!85.00!SREBF1;;chr9:132427972..132428056,+!p1@PRRX2!1.16!17.56!PRRX2;;chr1:170633348..170633399,+!p2@PRRX1!1.15!17.98!PRRX1;;chr17:46675420..46675465,-!p3@HOXB6!1.15!14.99!HOXB6;;chr3:12392991..12393030,+!p7@PPARG!1.13!12.42!PPARG;;chr5:92918919..92918942,+!p1@NR2F1!1.11!53.53!NR2F1;;chr12:54394309..54394336,+!p2@HOXC9!1.09!11.35!HOXC9;;chr3:126076264..126076305,-!p2@KLF15!1.08!15.42!KLF15;;chr11:46299199..46299233,+!p1@CREB3L1!1.06!54.60!CREB3L1;;chr12:54402729..54402743,+!p3@HOXC8!1.06!10.49!HOXC8;;chr2:239756739..239756755,+!p2@TWIST2!1.05!17.77!TWIST2;;chr12:54393880..54393962,+!p1@HOXC9!1.04!10.06!HOXC9;;chr12:54779511..54779577,-!p5@ZNF385A!1.04!10.06!ZNF385A;;chrX:106960285..106960299,-!p1@TSC22D3!1.03!265.48!TSC22D3;;chr17:46682321..46682362,-!p1@HOXB6!1.03!9.63!HOXB6;;chr3:12392932..12392962,+!p8@PPARG!1.02!9.42!PPARG;;chr4:174450089..174450153,-!p2@HAND2!1.02!9.42!HAND2;;chr13:41240717..41240735,-!p2@FOXO1!1.01!63.80!FOXO1;;chr4:4861385..4861398,+!p1@MSX1!1.01!27.83!MSX1;;chr14:62203595..62203676,+!p4@HIF1A!1.01!17.34!HIF1A;;chr1:170633262..170633285,+!p3@PRRX1!1.01!10.71!PRRX1;;chr18:53068911..53068935,-!p4@TCF4!1.00!10.28!TCF4;;chr10:131762504..131762555,-!p1@EBF3!1.00!8.99!EBF3;;chr2:176994408..176994492,+!p1@HOXD8!1.00!8.99!HOXD8;;chr1:170632959..170632987,+!p4@PRRX1!0.98!9.42!PRRX1;;chr1:170632477..170632506,+!p6@PRRX1!0.98!8.56!PRRX1;;chr1:23885981..23886002,-!p1@ID3!0.97!1488.64!ID3;;chr2:19558373..19558392,-!p1@OSR1!0.97!23.55!OSR1;;chr22:39916888..39916894,+!p12@ATF4!0.97!8.35!ATF4;;chr17:46690839..46690884,-!p1@HOXB8!0.96!8.14!HOXB8;;chr10:51572408..51572454,+!p3@NCOA4!0.95!47.53!NCOA4;;chr17:17726892..17726903,-!p6@SREBF1!0.95!8.99!SREBF1;;chr3:157823517..157823562,-!p1@SHOX2!0.94!8.35!SHOX2;;chr8:49833948..49833973,-!p2@SNAI2!0.93!50.10!SNAI2;;chr7:27192185..27192209,-!p1@HOXA3!0.92!7.28!HOXA3;;chr7:27205136..27205164,-!p1@HOXA9!0.92!7.28!HOXA9;;chr17:17723626..17723663,-!p4@SREBF1!0.91!14.99!SREBF1;;chr10:28034739..28034756,-!p1@MKX!0.91!7.07!MKX;;chr14:61116183..61116208,-!p1@SIX1!0.88!26.12!SIX1;;chr7:19157043..19157088,-!p2@TWIST1!0.88!17.13!TWIST1;;chr5:92918956..92918969,+!p4@NR2F1!0.88!7.28!NR2F1;;chr5:2751762..2751784,-!p1@IRX2!0.88!6.64!IRX2;;chr19:50432453..50432468,+!p1@ATF5!0.87!378.74!ATF5;;chr19:13136241..13136258,+!p7@NFIX!0.87!8.78!NFIX;;chr17:17723746..17723766,-!p5@SREBF1!0.86!10.49!SREBF1;;chr11:113930401..113930422,+!p3@ZBTB16!0.86!6.21!ZBTB16;;chr20:39317868..39317884,-!p1@MAFB!0.85!77.72!MAFB;;chr2:46602901..46602926,+!p7@EPAS1!0.85!8.35!EPAS1;;chr3:12329397..12329433,+!p2@PPARG!0.84!14.13!PPARG;;chr5:92919100..92919135,+!p3@NR2F1!0.84!7.28!NR2F1;;chr19:46801639..46801699,+!p1@HIF3A!0.84!5.99!HIF3A;;chr2:46612891..46612907,+!p10@EPAS1!0.84!5.99!EPAS1;;chr12:54422217..54422239,+!p3@HOXC6!0.84!5.99!HOXC6;;chr15:96873984..96873999,+!p3@NR2F2!0.83!45.60!NR2F2;;chr2:85980951..85981004,+!p1@ATOH8!0.83!9.85!ATOH8;;chr19:50435736..50435781,+!p3@ATF5!0.83!8.14!ATF5;;chr10:114889016..114889037,+!p15@TCF7L2!0.83!5.78!TCF7L2;;chr12:54410948..54410992,+!p3@HOXC5!0.83!5.78!HOXC5;;chr5:76382989..76383001,-!p4@ZBED3!0.83!5.78!ZBED3;;chr7:27196217..27196246,-!p2@HOXA7!0.83!5.78!HOXA7;;chr16:31076332..31076388,-!p3@ZNF668!0.83!5.78!ZNF668;;chr8:49833978..49833996,-!p1@SNAI2!0.82!125.68!SNAI2;;chr5:72744594..72744609,-!p1@FOXD1!0.82!27.40!FOXD1;;chr14:89628064..89628109,-!p4@FOXN3!0.82!11.99!FOXN3;;chr11:46299539..46299620,+!p2@CREB3L1!0.82!9.85!CREB3L1;;chr8:99956662..99956684,+!p1@OSR2!0.82!8.99!OSR2;;chr7:73038867..73038878,-!p2@MLXIPL!0.82!5.57!MLXIPL;;chr10:31610110..31610159,+!p2@ZEB1!0.82!5.57!ZEB1;;chr2:119604456..119604501,-!p2@EN1!0.82!5.57!EN1;;chr7:44143925..44143970,+!p1@AEBP1!0.81!132.10!AEBP1;;chr7:44143978..44143989,+!p2@AEBP1!0.81!10.49!AEBP1;;chr17:46687959..46688007,-!p2@HOXB7!0.81!7.71!HOXB7;;chr8:72756213..72756243,-!p5@MSC!0.81!7.28!MSC;;chr15:96874145..96874166,+!p7@NR2F2!0.80!10.71!NR2F2;;chr8:72756667..72756736,-!p2@MSC!0.80!8.56!MSC;;chr3:12393032..12393047,+!p15@PPARG!0.80!5.35!PPARG;;chr4:174451350..174451363,-!p3@HAND2!0.80!5.35!HAND2;;chr11:47279568..47279577,+!p8@NR1H3!0.80!5.35!NR1H3;;chr13:37494275..37494304,-!p2@SMAD9!0.80!5.35!SMAD9;;chr13:41240737..41240787,-!p1@FOXO1!0.79!66.37!FOXO1;;chr2:113994526..113994556,-!p3@PAX8!0.79!5.14!PAX8;;chr14:21566731..21566836,-!p1@ZNF219!0.78!59.09!ZNF219;;chr19:13134772..13134822,+!p2@NFIX!0.78!7.71!NFIX;;chr17:46621937..46621966,-!p2@HOXB2!0.77!14.13!HOXB2;;chr7:150946015..150946070,-!p3@SMARCD3!0.77!11.13!SMARCD3;;chr1:23696348..23696363,-!p4@ZNF436!0.77!5.57!ZNF436;;chr5:92919375..92919438,+!p6@NR2F1!0.77!5.35!NR2F1;;chr6:108977520..108977534,+!p7@FOXO3!0.77!4.92!FOXO3;;chr8:40755333..40755352,-!p1@ZMAT4!0.77!4.92!ZMAT4;;chr1:170632137..170632172,+!p10@PRRX1!0.77!4.92!PRRX1;;chr12:54447637..54447659,+!p4@HOXC4!0.76!4.71!HOXC4;;chr14:62162258..62162269,+!p2@HIF1A!0.75!49.89!HIF1A;;chrX:106960221..106960236,-!p3@TSC22D3!0.75!13.92!TSC22D3;;chr3:12329358..12329393,+!p3@PPARG!0.75!12.20!PPARG;;chr12:80085061..80085119,-!p6@PAWR!0.74!7.49!PAWR;;chr16:86544113..86544145,+!p1@FOXF1!0.74!5.78!FOXF1;;chr14:95236440..95236465,-!p1@GSC!0.74!4.50!GSC;;chr14:62203749..62203798,+!p5@HIF1A!0.73!7.07!HIF1A;;chr15:57511609..57511651,+!p2@TCF12!0.72!7.49!TCF12;;chr19:13136130..13136165,+!p6@NFIX!0.72!5.78!NFIX;;chr5:92919068..92919082,+!p5@NR2F1!0.72!5.14!NR2F1;;chr5:92919452..92919496,+!p11@NR2F1!0.72!4.28!NR2F1;;chr3:12392972..12392983,+!p16@PPARG!0.72!4.28!PPARG;;chr1:170633058..170633084,+!p5@PRRX1!0.72!4.28!PRRX1;;chr20:30193083..30193098,+!p1@ID1!0.71!378.10!ID1;;chr10:77161504..77161530,-!p1@ZNF503!0.71!62.30!ZNF503;;chr5:72744445..72744466,-!p2@FOXD1!0.71!7.28!FOXD1;;chr8:72756267..72756296,-!p4@MSC!0.71!6.42!MSC;;chr16:54964740..54964789,+!p1@IRX5!0.71!6.21!IRX5;;chr6:85473156..85473210,-!p2@TBX18!0.71!5.14!TBX18;;chr9:77112244..77112262,+!p1@RORB!0.71!4.71!RORB;;chr19:13106214..13106382,+!p1@NFIX!0.70!105.77!NFIX;;chr2:85981008..85981025,+!p7@ATOH8!0.70!4.07!ATOH8;;chr5:158527104..158527135,-!p4@EBF1!0.70!4.07!EBF1;;chr1:170632250..170632277,+!p7@PRRX1!0.70!4.07!PRRX1;;chr1:170632310..170632321,+!p15@PRRX1!0.70!4.07!PRRX1;;chr14:75894714..75894733,+!p1@JDP2!0.69!125.89!JDP2;;chr3:69788576..69788648,+!p1@MITF!0.69!23.55!MITF;;chr2:223163706..223163730,-!p1@PAX3!0.69!3.85!PAX3;;chr2:85980903..85980914,+!p11@ATOH8!0.69!3.85!ATOH8;;chr3:12392909..12392921,+!p11@PPARG!0.69!3.85!PPARG;;chr10:114889045..114889074,+!p12@TCF7L2!0.69!3.85!TCF7L2;;chr12:54422245..54422263,+!p7@HOXC6!0.69!3.85!HOXC6;;chr7:27205106..27205134,-!p2@HOXA9!0.69!3.85!HOXA9;;chr10:63809013..63809041,+!p3@ARID5B!0.68!24.19!ARID5B;;chr17:46688334..46688385,-!p1@HOXB7!0.68!5.78!HOXB7;;chr10:77161650..77161661,-!p4@ZNF503!0.68!5.57!ZNF503;;chrX:66763815..66763854,+!p2@AR!0.68!5.14!AR;;chr6:144329384..144329405,-!p1@PLAGL1!0.67!49.89!PLAGL1;;chr2:27357446..27357475,-!p2@PREB!0.67!14.34!PREB;;chr7:44143997..44144008,+!p3@AEBP1!0.67!4.92!AEBP1;;chr6:45296048..45296082,+!p1@RUNX2!0.67!4.28!RUNX2;;chr17:46132044..46132080,+!p4@NFE2L1!0.67!3.64!NFE2L1;;chr14:62162285..62162296,+!p3@HIF1A!0.66!21.41!HIF1A;;chr1:23696308..23696339,-!p2@ZNF436!0.66!8.35!ZNF436;;chr17:46127997..46128015,+!p5@NFE2L1!0.66!5.14!NFE2L1;;chr11:12696071..12696086,+!p3@TEAD1!0.66!4.92!TEAD1;;chr2:46602879..46602899,+!p8@EPAS1!0.66!4.50!EPAS1;;chr14:89883509..89883587,-!p2@FOXN3!0.65!27.83!FOXN3;;chr1:8934931..8934947,-!p4@ENO1!0.65!13.06!ENO1;;chr17:59477233..59477263,+!p1@TBX2!0.65!12.20!TBX2;;chr15:42743341..42743377,-!p3@ZFP106!0.65!6.21!ZFP106;;chr20:48808321..48808329,+!p18@CEBPB!0.65!3.85!CEBPB;;chr1:170632683..170632696,+!p12@PRRX1!0.65!3.43!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.65!3.43!PRRX1;;chr17:46687935..46687950,-!p3@HOXB7!0.65!3.43!HOXB7;;chr2:177001290..177001315,+!p1@HOXD3!0.65!3.43!HOXD3;;chr2:85981107..85981120,+!p3@ATOH8!0.65!3.43!ATOH8;;chr12:54394416..54394467,+!p5@HOXC9!0.65!3.43!HOXC9;;chr8:25902876..25902936,-!p1@EBF2!0.65!3.43!EBF2;;chr15:31619871..31619884,+!p8@KLF13!0.64!5.99!KLF13;;chrX:66763856..66763896,+!p1@AR!0.64!5.14!AR;;chr1:61869835..61869848,+!p8@NFIA!0.64!4.71!NFIA;;chr17:17723702..17723721,-!p7@SREBF1!0.64!4.28!SREBF1;;chr8:77593474..77593612,+!p1@ZFHX4!0.63!16.06!ZFHX4;;chr5:92918894..92918912,+!p2@NR2F1!0.63!12.20!NR2F1;;chr2:8822176..8822196,+!p1@ID2!0.62!539.53!ID2;;chr16:79634624..79634642,-!p1@MAF!0.62!14.56!MAF;;chr17:1959369..1959388,+!p2@HIC1!0.62!9.42!HIC1;;chr20:48807615..48807644,+!p6@CEBPB!0.62!5.78!CEBPB;;chr19:47922750..47922795,-!p1@MEIS3!0.62!5.57!MEIS3;;chr1:119530857..119530884,-!p4@TBX15!0.62!3.21!TBX15;;chr7:27196267..27196311,-!p1@HOXA7!0.62!3.21!HOXA7;;chr10:71333172..71333186,-!p1@NEUROG3!0.62!3.21!NEUROG3;;chr20:48807351..4880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T10;;chr2:27357479..27357524,-!p1@PREB!0.22!41.96!PREB;;chr14:100705335..100705360,+!p4@YY1!0.22!7.92!YY1;;chr2:28616358..28616380,+!p3@FOSL2!0.22!7.07!FOSL2;;chr3:150126759..150126784,+!p2@TSC22D2!0.22!6.21!TSC22D2;;chr1:43148792..43148849,+!p2@YBX1!0.22!4.92!YBX1;;chr1:211433275..211433335,+!p2@RCOR3!0.22!3.85!RCOR3;;chr16:29819446..29819471,+!p9@MAZ!0.22!3.64!MAZ;;chr19:22018938..22018963,-!p3@ZNF43!0.22!2.78!ZNF43;;chr15:61521417..61521460,-!p2@RORA!0.22!2.57!RORA;;chr17:42298339..42298361,-!p5@UBTF!0.22!2.57!UBTF;;chr10:51572339..51572376,+!p4@NCOA4!0.22!2.57!NCOA4;;chr6:26659967..26659982,-!p1@ZNF322P1,p1@ZNF322!0.22!2.36!ZNF322;;chr15:37390850..37390909,-!p3@MEIS2!0.22!2.14!MEIS2;;chr19:4065848..4065909,-!p4@ZBTB7A!0.22!2.14!ZBTB7A;;chr19:6280007..6280019,-!p3@MLLT1!0.22!2.14!MLLT1;;chr17:7382834..7382855,-!p6@ZBTB4!0.22!1.71!ZBTB4;;chr6:21597514..21597578,+!p4@SOX4!0.22!1.71!SOX4;;chr8:145159277..145159282,+!p7@MAF1!0.22!1.50!MAF1;;chr4:87928166..87928186,+!p12@AFF1!0.22!1.50!AFF1;;chr1:164528588..164528610,+!p8@PBX1!0.22!1.50!PBX1;;chr1:8483723..8483752,-!p12@RERE!0.22!1.50!RERE;;chr9:130952713..130952727,-!p3@CIZ1!0.22!1.50!CIZ1;;chr9:2029144..2029164,+!p10@SMARCA2!0.22!1.07!SMARCA2;;chr2:191878812..191878823,-!p2@STAT1!0.22!1.07!STAT1;;chr3:141087144..141087170,+!p11@ZBTB38!0.22!1.07!ZBTB38;;chr17:7370612..7370625,-!p9@ZBTB4!0.22!1.07!ZBTB4;;chr8:145535378..145535420,+!p4@HSF1!0.22!1.07!HSF1;;chr11:706938..707008,-!p3@DEAF1!0.22!1.07!DEAF1;;chr13:46626824..46626835,-!p8@ZC3H13!0.22!1.07!ZC3H13;;chr16:31454084..31454115,-!p1@ZNF843!0.22!0.86!ZNF843;;chr22:39917189..39917207,+!p5@ATF4!0.22!0.86!ATF4;;chr2:102091566..102091581,-!p1@RFX8!0.22!0.64!RFX8;;chr2:176969179..176969226,+!p2@HOXD11!0.22!0.64!HOXD11;;chr2:177001268..177001287,+!p3@HOXD3!0.22!0.64!HOXD3;;chr2:19558327..19558334,-!p2@OSR1!0.22!0.64!OSR1;;chr2:208030614..208030625,-!p9@KLF7!0.22!0.64!KLF7;;chr2:45236540..45236577,-!p1@SIX2!0.22!0.64!SIX2;;chr2:66662396..66662407,+!p4@MEIS1!0.22!0.64!MEIS1;;chr3:12329339..12329356,+!p5@PPARG!0.22!0.64!PPARG;;chr3:15045419..15045433,+!p8@NR2C2!0.22!0.64!NR2C2;;chr3:187455529..187455544,-!p5@BCL6!0.22!0.64!BCL6;;chr3:187455634..187455651,-!p7@BCL6!0.22!0.64!BCL6;;chr3:21792631..21792665,-!p3@ZNF385D!0.22!0.64!ZNF385D;;chr3:24536485..24536500,-!p3@THRB!0.22!0.64!THRB;;chr3:24536516..24536545,-!p6@THRB!0.22!0.64!THRB;;chr3:42695202..42695213,+!p6@ZBTB47!0.22!0.64!ZBTB47;;chr4:111544254..111544270,-!p3@PITX2!0.22!0.64!PITX2;;chr4:111558118..111558133,-!p5@PITX2!0.22!0.64!PITX2;;chr15:31619140..31619152,+!p11@KLF13!0.22!0.64!KLF13;;chr15:35280823..35280852,-!p6@ZNF770!0.22!0.64!ZNF770;;chr15:67459116..67459123,+!p23@SMAD3!0.22!0.64!SMAD3;;chr16:30616396..30616400,-!p4@ZNF689!0.22!0.64!ZNF689;;chr16:85932760..85932775,+!p1@IRF8!0.22!0.64!IRF8;;chr16:86600458..86600461,+!p3@FOXC2!0.22!0.64!FOXC2;;chr16:86601052..86601066,+!p4@FOXC2!0.22!0.64!FOXC2;;chr17:38501500..38501517,+!p13@RARA!0.22!0.64!RARA;;chr17:40440177..40440190,+!p6@STAT5A!0.22!0.64!STAT5A;;chr17:40540591..40540600,-!p3@STAT3!0.22!0.64!STAT3;;chr17:46655672..46655697,-!p3@HOXB4!0.22!0.64!HOXB4;;chr17:46670037..46670060,-!p3@HOXB5!0.22!0.64!HOXB5;;chr17:46675539..46675551,-!p7@HOXB6!0.22!0.64!HOXB6;;chr17:46692624..46692659,-!p3@HOXB8!0.22!0.64!HOXB8;;chr18:22931979..22931992,-!p3@ZNF521!0.22!0.64!ZNF521;;chr18:53068893..53068902,-!p28@TCF4!0.22!0.64!TCF4;;chr18:53069419..53069450,-!p34@TCF4!0.22!0.64!TCF4;;chr18:53070846..53070902,-!p6@TCF4!0.22!0.64!TCF4;;chr18:53089453..53089482,-!p11@TCF4!0.22!0.64!TCF4;;chr19:12734557..12734565,+!p4@ZNF791!0.22!0.64!ZNF791;;chr19:13135989..13136023,+!p18@NFIX!0.22!0.64!NFIX;;chr19:22193731..22193751,-!p1@ZNF208!0.22!0.64!ZNF208;;chr19:3574330..3574393,+!p2@HMG20B!0.22!0.64!HMG20B;;chrX:107018836..107018862,-!p8@TSC22D3!0.22!0.64!TSC22D3;;chr9:33295026..33295035,+!p2@NFX1!0.22!0.64!NFX1;;chr10:114886405..114886424,+!p26@TCF7L2!0.22!0.64!TCF7L2;;chr10:3823111..3823117,-!p27@KLF6!0.22!0.64!KLF6;;chr10:3824206..3824226,-!p10@KLF6!0.22!0.64!KLF6;;chr10:51585449..51585487,+!p6@NCOA4!0.22!0.64!NCOA4;;chr10:60144869..60144887,+!p3@TFAM!0.22!0.64!TFAM;;chr11:113930955..113930969,+!p8@ZBTB16!0.22!0.64!ZBTB16;;chr11:46332679..46332695,+!p12@CREB3L1!0.22!0.64!CREB3L1;;chr11:64073314..64073351,+!p5@ESRRA!0.22!0.64!ESRRA;;chr12:10875548..10875563,-!p13@CSDA!0.22!0.64!CSDA;;chr12:114843587..114843600,-!p11@TBX5!0.22!0.64!TBX5;;chr12:114843628..114843639,-!p9@TBX5!0.22!0.64!TBX5;;chr12:114845810..114845824,-!p1@TBX5!0.22!0.64!TBX5;;chr12:115121802..115121814,-!p5@TBX3!0.22!0.64!TBX3;;chr12:124496534..124496544,+!p6@ZNF664!0.22!0.64!ZNF664;;chr12:124873824..124873833,-!p19@NCOR2!0.22!0.64!NCOR2;;chr12:124915257..124915277,-!p23@NCOR2!0.22!0.64!NCOR2;;chr12:12794994..12795024,+!p5@CREBL2!0.22!0.64!CREBL2;;chr12:52448213..52448262,+!p6@NR4A1!0.22!0.64!NR4A1;;chr12:53625846..53625861,-!p6@RARG!0.22!0.64!RARG;;chr12:54332652..54332671,+!p2@HOXC13!0.22!0.64!HOXC13;;chr12:54380404..54380433,+!p3@HOXC10!0.22!0.64!HOXC10;;chr12: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+|ffid_belonging_in_development=CL:0000134
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11327-117E4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:38, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0