FFCP PHASE1:Mm9::chr7:26472013..26472031,+: Difference between revisions
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{{FFCP|EntrezGene=21803|HGNC=|MCL_coexpression_id=2223|UniProt=P04202,Q3UNK5|association_with_transcript=0bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end|description=CAGE_peak_1_at_Tgfb1_5end|id=chr7:26472013..26472031,+|ontology_enrichment_celltype=CL:0000988!1.21e-15!32;CL:0002032!1.21e-15!32;CL:0000037!1.21e-15!32;CL:0000566!1.21e-15!32;CL:0000837!1.21e-15!32;CL:0002031!2.85e-13!25;CL:0002320!1.44e-12!46;CL:0000134!1.44e-12!46;CL:0000049!3.63e-10!19;CL:0000219!1.33e-08!54;CL:0000738!1.42e-08!17;CL:0002087!1.42e-08!17;CL:0000763!1.46e-08!16;CL:0000838!1.65e-07!12;CL:0000839!4.30e-07!13;CL:0000084!7.12e-07!11;CL:0000827!7.12e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-15,32;CL:0002032,1.21e-15,32;CL:0000037,1.21e-15,32;CL:0000837,1.21e-15,32;CL:0002031,2.85e-13,25;CL:0002320,1.36e-12,46;CL:0000134,1.36e-12,46;CL:0000049,3.63e-10,19;CL:0000219,1.28e-08,54;CL:0000738,1.42e-08,17;CL:0002087,1.42e-08,17;CL:0000763,1.46e-08,16;CL:0000838,1.65e-07,12;CL:0000839,4.29e-07,13;CL:0000084,7.11e-07,11;CL:0000827,7.11e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.11e-19!48;UBERON:0002390!1.15e-19!45;UBERON:0003061!1.15e-19!45;UBERON:0002405!2.53e-19!70;UBERON:0003081!2.83e-18!88;UBERON:0000926!7.32e-16!193;UBERON:0004120!7.32e-16!193;UBERON:0006603!7.32e-16!193;UBERON:0002384!1.44e-12!46;UBERON:0004177!7.87e-12!29;UBERON:0005057!1.85e-11!51;UBERON:0003104!1.32e-09!131;UBERON:0009142!1.32e-09!131;UBERON:0002370!7.08e-09!23;UBERON:0000974!7.08e-09!23;UBERON:0004807!7.08e-09!23;UBERON:0005058!7.08e-09!23;UBERON:0003351!7.08e-09!23;UBERON:0009113!7.08e-09!23;UBERON:0003295!7.08e-09!23;UBERON:0009722!7.08e-09!23;UBERON:0005562!7.08e-09!23;UBERON:0007690!7.08e-09!23;UBERON:0000065!1.20e-08!41;UBERON:0003408!1.23e-08!24;UBERON:0002371!1.23e-08!16;UBERON:0001004!1.55e-08!42;UBERON:0001474!2.21e-08!22;UBERON:0004765!2.21e-08!22;UBERON:0001434!2.21e-08!22;UBERON:0006562!2.61e-08!24;UBERON:0001557!2.61e-08!24;UBERON:0001042!2.61e-08!24;UBERON:0008814!2.61e-08!24;UBERON:0009145!2.61e-08!24;UBERON:0002368!6.12e-08!60;UBERON:0002204!8.80e-08!32;UBERON:0001041!1.72e-07!92;UBERON:0000077!2.85e-07!97;UBERON:0002530!5.61e-07!65;UBERON:0000072!8.43e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.11e-19,48;UBERON:0002405,1.11e-19,48;UBERON:0002390,1.14e-19,45;UBERON:0003061,1.14e-19,45;UBERON:0003081,1.22e-17,87;UBERON:0000926,1.13e-14,120;UBERON:0004120,1.13e-14,120;UBERON:0006603,1.13e-14,120;UBERON:0002384,1.36e-12,46;UBERON:0004177,7.86e-12,29;UBERON:0005057,7.86e-12,29;UBERON:0000077,6.98e-11,35;UBERON:0001041,1.07e-09,80;UBERON:0002370,7.07e-09,23;UBERON:0000974,7.07e-09,23;UBERON:0004807,7.07e-09,23;UBERON:0005058,7.07e-09,23;UBERON:0003351,7.07e-09,23;UBERON:0009113,7.07e-09,23;UBERON:0003295,7.07e-09,23;UBERON:0009722,7.07e-09,23;UBERON:0005562,7.07e-09,23;UBERON:0007690,7.07e-09,23;UBERON:0000065,1.19e-08,41;UBERON:0003408,1.23e-08,24;UBERON:0002371,1.23e-08,16;UBERON:0001004,1.55e-08,42;UBERON:0001474,2.21e-08,22;UBERON:0004765,2.21e-08,22;UBERON:0001434,2.21e-08,22;UBERON:0006562,2.61e-08,24;UBERON:0001557,2.61e-08,24;UBERON:0001042,2.61e-08,24;UBERON:0008814,2.61e-08,24;UBERON:0009145,2.61e-08,24;UBERON:0002368,5.91e-08,60;UBERON:0002204,8.80e-08,32;UBERON:0002530,5.44e-07,65;UBERON:0000072,8.42e-07,27|phase1_expression=2.5623815536767,0.697950815278722,1.36499771816861,0,0.500895729946347,0.839396359559449,1.40167584357315,77.7322407118289,700.846258870997,649.29499601721,67.9735333855255,98.3590720412498,47.0802007310816,54.7251719142924,33.9771957051976,41.7099050823041,15.3903613188192,96.2159604342625,95.7058746568057,78.5120855826356,18.9646537036886,69.5036658406197,40.7471671056739,15.0392877425802,14.6821939882989,0.57423196411502,1.29228598847722,0,0.760093677825496,2.26827116783938,1.33038306393183,137.80165614074,169.142816585757,110.937176710807,0,0.166234645358492,0,68.220655810116,71.1015163516658,51.828850653406,59.9996117791635,65.5723665560108,56.804711304645,5.28766635497425,5.37297735463427,2.9367480345869,15.6478268869608,0.436050312760893,1.5378032791413,1.74986909166855,8.53917171914711,1.43752564364972,127.682563209937,76.8883870532025,70.5796978199174,22.6388303711633,24.3553423947943,27.8462929829819,2.42779753031517,2.11596391708813,1.90149421051854,13.8926258148344,7.11435836888911,241.173124231415,211.617401589333,247.247080001243,74.9000276296012,56.095872576947,4.35496371695606,3.24014251996058,2.94454945891935,6.28432165688368,2.87129103237098,1.95985278743926,2.39613677545591,0,3.30347642998166,3.57524546638526,3.07213066512487,1.58263545276233,2.74462930807229,3.12548022334056,1.11673199600552,2.8138130501584,3.66715794664344,2.94628585473668,4.27115042397309,2.23679334990361,15.22096485997,15.6433129421046,63.4803230256674,33.5565312022741,0,1.07940638327563,1.94932925234301,1.79210754838934,25.7013288841106,20.1107780642108,23.6405264188611,14.8402621294343,1.12674735821344,23.0987659345772,25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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21803 | |||
|HGNC= | |||
|MCL_coexpression_id=2223 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P04202,uniprot:Q3UNK5 | |||
|association_with_transcript=0bp_to_ENSMUST00000002678,NM_011577,uc009ftq.1_5end | |||
|cluster_id=chr7:26472013..26472031,+ | |||
|description=CAGE_peak_1_at_Tgfb1_5end | |||
|id=chr7:26472013..26472031,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.21e-15!32;CL:0002032!1.21e-15!32;CL:0000037!1.21e-15!32;CL:0000566!1.21e-15!32;CL:0000837!1.21e-15!32;CL:0002031!2.85e-13!25;CL:0002320!1.44e-12!46;CL:0000134!1.44e-12!46;CL:0000049!3.63e-10!19;CL:0000219!1.33e-08!54;CL:0000738!1.42e-08!17;CL:0002087!1.42e-08!17;CL:0000763!1.46e-08!16;CL:0000838!1.65e-07!12;CL:0000839!4.30e-07!13;CL:0000084!7.12e-07!11;CL:0000827!7.12e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-15,32;CL:0002032,1.21e-15,32;CL:0000037,1.21e-15,32;CL:0000837,1.21e-15,32;CL:0002031,2.85e-13,25;CL:0002320,1.36e-12,46;CL:0000134,1.36e-12,46;CL:0000049,3.63e-10,19;CL:0000219,1.28e-08,54;CL:0000738,1.42e-08,17;CL:0002087,1.42e-08,17;CL:0000763,1.46e-08,16;CL:0000838,1.65e-07,12;CL:0000839,4.29e-07,13;CL:0000084,7.11e-07,11;CL:0000827,7.11e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.11e-19!48;UBERON:0002390!1.15e-19!45;UBERON:0003061!1.15e-19!45;UBERON:0002405!2.53e-19!70;UBERON:0003081!2.83e-18!88;UBERON:0000926!7.32e-16!193;UBERON:0004120!7.32e-16!193;UBERON:0006603!7.32e-16!193;UBERON:0002384!1.44e-12!46;UBERON:0004177!7.87e-12!29;UBERON:0005057!1.85e-11!51;UBERON:0003104!1.32e-09!131;UBERON:0009142!1.32e-09!131;UBERON:0002370!7.08e-09!23;UBERON:0000974!7.08e-09!23;UBERON:0004807!7.08e-09!23;UBERON:0005058!7.08e-09!23;UBERON:0003351!7.08e-09!23;UBERON:0009113!7.08e-09!23;UBERON:0003295!7.08e-09!23;UBERON:0009722!7.08e-09!23;UBERON:0005562!7.08e-09!23;UBERON:0007690!7.08e-09!23;UBERON:0000065!1.20e-08!41;UBERON:0003408!1.23e-08!24;UBERON:0002371!1.23e-08!16;UBERON:0001004!1.55e-08!42;UBERON:0001474!2.21e-08!22;UBERON:0004765!2.21e-08!22;UBERON:0001434!2.21e-08!22;UBERON:0006562!2.61e-08!24;UBERON:0001557!2.61e-08!24;UBERON:0001042!2.61e-08!24;UBERON:0008814!2.61e-08!24;UBERON:0009145!2.61e-08!24;UBERON:0002368!6.12e-08!60;UBERON:0002204!8.80e-08!32;UBERON:0001041!1.72e-07!92;UBERON:0000077!2.85e-07!97;UBERON:0002530!5.61e-07!65;UBERON:0000072!8.43e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.11e-19,48;UBERON:0002405,1.11e-19,48;UBERON:0002390,1.14e-19,45;UBERON:0003061,1.14e-19,45;UBERON:0003081,1.22e-17,87;UBERON:0000926,1.13e-14,120;UBERON:0004120,1.13e-14,120;UBERON:0006603,1.13e-14,120;UBERON:0002384,1.36e-12,46;UBERON:0004177,7.86e-12,29;UBERON:0005057,7.86e-12,29;UBERON:0000077,6.98e-11,35;UBERON:0001041,1.07e-09,80;UBERON:0002370,7.07e-09,23;UBERON:0000974,7.07e-09,23;UBERON:0004807,7.07e-09,23;UBERON:0005058,7.07e-09,23;UBERON:0003351,7.07e-09,23;UBERON:0009113,7.07e-09,23;UBERON:0003295,7.07e-09,23;UBERON:0009722,7.07e-09,23;UBERON:0005562,7.07e-09,23;UBERON:0007690,7.07e-09,23;UBERON:0000065,1.19e-08,41;UBERON:0003408,1.23e-08,24;UBERON:0002371,1.23e-08,16;UBERON:0001004,1.55e-08,42;UBERON:0001474,2.21e-08,22;UBERON:0004765,2.21e-08,22;UBERON:0001434,2.21e-08,22;UBERON:0006562,2.61e-08,24;UBERON:0001557,2.61e-08,24;UBERON:0001042,2.61e-08,24;UBERON:0008814,2.61e-08,24;UBERON:0009145,2.61e-08,24;UBERON:0002368,5.91e-08,60;UBERON:0002204,8.80e-08,32;UBERON:0002530,5.44e-07,65;UBERON:0000072,8.42e-07,27 | |||
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| |||
|short_description=p1@Tgfb1 | |||
}} |
Revision as of 20:42, 4 August 2015
Short description: | p1@Tgfb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tgfb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2223 |
Association with transcript: | 0bp_to_ENSMUST00000002678, NM_011577, uc009ftq.1_5end |
EntrezGene: | 21803 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.21e-15 | 32 |
hematopoietic oligopotent progenitor cell | 1.21e-15 | 32 |
hematopoietic stem cell | 1.21e-15 | 32 |
hematopoietic multipotent progenitor cell | 1.21e-15 | 32 |
hematopoietic lineage restricted progenitor cell | 2.85e-13 | 25 |
connective tissue cell | 1.36e-12 | 46 |
mesenchymal cell | 1.36e-12 | 46 |
common myeloid progenitor | 3.63e-10 | 19 |
motile cell | 1.28e-08 | 54 |
leukocyte | 1.42e-08 | 17 |
nongranular leukocyte | 1.42e-08 | 17 |
myeloid cell | 1.46e-08 | 16 |
lymphoid lineage restricted progenitor cell | 1.65e-07 | 12 |
myeloid lineage restricted progenitor cell | 4.29e-07 | 13 |
T cell | 7.11e-07 | 11 |
pro-T cell | 7.11e-07 | 11 |