FFCP PHASE1:Mm9::chr3:68828203..68828207,+: Difference between revisions
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{{FFCP|EntrezGene=70099|HGNC=|MCL_coexpression_id=5|UniProt=|association_with_transcript=87bp_to_ENSMUST00000149174_5end|description=CAGE_peak_7_at_Smc4_5end|id=chr3:68828203..68828207,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!3.70e-13!147;UBERON:0000926!1.37e-09!193;UBERON:0004120!1.37e-09!193;UBERON:0006603!1.37e-09!193;UBERON:0000065!1.18e-07!41;UBERON:0001004!3.22e-07!42;UBERON:0004177!5.45e-07!29;UBERON:0001041!9.42e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.55e-11,29;UBERON:0005057,8.55e-11,29;UBERON:0002370,7.07e-09,23;UBERON:0000974,7.07e-09,23;UBERON:0004807,7.07e-09,23;UBERON:0005058,7.07e-09,23;UBERON:0003351,7.07e-09,23;UBERON:0009113,7.07e-09,23;UBERON:0003295,7.07e-09,23;UBERON:0009722,7.07e-09,23;UBERON:0005562,7.07e-09,23;UBERON:0007690,7.07e-09,23;UBERON:0000077,1.18e-08,35;UBERON:0006562,1.85e-08,24;UBERON:0003408,1.85e-08,24;UBERON:0001557,1.85e-08,24;UBERON:0001042,1.85e-08,24;UBERON:0008814,1.85e-08,24;UBERON:0009145,1.85e-08,24;UBERON:0001048,2.72e-08,134;UBERON:0002368,8.83e-08,60;UBERON:0000072,2.15e-07,27;UBERON:0001041,2.27e-07,80;UBERON:0003929,2.41e-07,55;UBERON:0002530,5.35e-07,65|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.516493293766305,0.281577444303333,0,0,0,0.513602189793617,0.0874204024189974,0,0,0.699561878128147,0,0,0,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0.346970653532272,1.21786191324856,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0.650602214813519,0,0,1.65775299619287,0.136072998302656,0.384341160854549,0.374806898238915,0.258703370739016,0.215567992932842,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.540186184383045,0.473489471170421,0.787056926989615,1.3884040159864,2.55787339225449,0.268273401399619,0.700592054203017,0.658239399653922,0.32833492815819,0.243206428637567,0.292399974850665,0.658650345873152,0,0,0.205809224758569,0,0,0.639864751605702,0,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,1.51296634912286,0.199141273254367,0,0.685491075658373,0,0.407302655690628,0.581857461502877,0.420814919341911,0.189709611372772,0.738050739898011,0,0.123397163921801,0,0,0,1.12431056192427,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,1.94562272130042,2.19649130550465,18.6898668485561,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,1.18821560042632,0.704070744865506,0,0.476087281772027,0.390267295715598,0.315270288212382,0.8858587585951,0.318909537314974,0.327726629431476,0,0,0,0,0,0,0,0,0.983609672260053,0,0.631016438832513,0,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.943025398779491,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.740778109478847,3.57900068308913,1.50363650493128,0.686334519619568,0,0,0,0,0,0,0.540026704109006,0.627264888043406,0.655087691238533,0.539457385539283,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.258319646955462,1.68956125490778,0.704143431874524,0.39061315453185,0.209718688851422,3.62376181239009,1.72818003754719,0.948033361884535,0.608175645870493,0.616265742988964,2.20865399062252,0.537080087002444,0.39736270956253,1.9231271923195,1.03382669022204,1.51449674922221,0.914481679859998,2.52065462842101,1.65678397257579,1.6356013078856,1.05189211963412,0,0,0.179427713218951,0.503653849092235,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,1.3492355185943,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,1.06485483695602,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421|short_description=p7@Smc4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:70099 | |||
|HGNC= | |||
|MCL_coexpression_id=5 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=87bp_to_ENSMUST00000149174_5end | |||
|cluster_id=chr3:68828203..68828207,+ | |||
|description=CAGE_peak_7_at_Smc4_5end | |||
|id=chr3:68828203..68828207,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!3.70e-13!147;UBERON:0000926!1.37e-09!193;UBERON:0004120!1.37e-09!193;UBERON:0006603!1.37e-09!193;UBERON:0000065!1.18e-07!41;UBERON:0001004!3.22e-07!42;UBERON:0004177!5.45e-07!29;UBERON:0001041!9.42e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,8.55e-11,29;UBERON:0005057,8.55e-11,29;UBERON:0002370,7.07e-09,23;UBERON:0000974,7.07e-09,23;UBERON:0004807,7.07e-09,23;UBERON:0005058,7.07e-09,23;UBERON:0003351,7.07e-09,23;UBERON:0009113,7.07e-09,23;UBERON:0003295,7.07e-09,23;UBERON:0009722,7.07e-09,23;UBERON:0005562,7.07e-09,23;UBERON:0007690,7.07e-09,23;UBERON:0000077,1.18e-08,35;UBERON:0006562,1.85e-08,24;UBERON:0003408,1.85e-08,24;UBERON:0001557,1.85e-08,24;UBERON:0001042,1.85e-08,24;UBERON:0008814,1.85e-08,24;UBERON:0009145,1.85e-08,24;UBERON:0001048,2.72e-08,134;UBERON:0002368,8.83e-08,60;UBERON:0000072,2.15e-07,27;UBERON:0001041,2.27e-07,80;UBERON:0003929,2.41e-07,55;UBERON:0002530,5.35e-07,65 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0.516493293766305,0.281577444303333,0,0,0,0.513602189793617,0.0874204024189974,0,0,0.699561878128147,0,0,0,0.0850432901510698,0.198581902401771,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0,0,0,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0.346970653532272,1.21786191324856,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0,0,0,0,0.484875253135222,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0.407357455401265,0,0,0,0.650602214813519,0,0,1.65775299619287,0.136072998302656,0.384341160854549,0.374806898238915,0.258703370739016,0.215567992932842,0.189106080167819,0,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.703578179943289,0.540186184383045,0.473489471170421,0.787056926989615,1.3884040159864,2.55787339225449,0.268273401399619,0.700592054203017,0.658239399653922,0.32833492815819,0.243206428637567,0.292399974850665,0.658650345873152,0,0,0.205809224758569,0,0,0.639864751605702,0,0.257734922644187,0,0,0,0.474529061544512,0.164698954724011,0.251335208800269,0.198956472041151,0,0,1.51296634912286,0.199141273254367,0,0.685491075658373,0,0.407302655690628,0.581857461502877,0.420814919341911,0.189709611372772,0.738050739898011,0,0.123397163921801,0,0,0,1.12431056192427,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,1.94562272130042,2.19649130550465,18.6898668485561,0,0.312037673114561,0,0,0,0,0.189491411770485,0.162964976442026,1.18821560042632,0.704070744865506,0,0.476087281772027,0.390267295715598,0.315270288212382,0.8858587585951,0.318909537314974,0.327726629431476,0,0,0,0,0,0,0,0,0.983609672260053,0,0.631016438832513,0,0.215423397732799,0,0,0.283076530788832,0,0.584511715822624,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0.943025398779491,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0,0.720244376125241,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.740778109478847,3.57900068308913,1.50363650493128,0.686334519619568,0,0,0,0,0,0,0.540026704109006,0.627264888043406,0.655087691238533,0.539457385539283,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.258319646955462,1.68956125490778,0.704143431874524,0.39061315453185,0.209718688851422,3.62376181239009,1.72818003754719,0.948033361884535,0.608175645870493,0.616265742988964,2.20865399062252,0.537080087002444,0.39736270956253,1.9231271923195,1.03382669022204,1.51449674922221,0.914481679859998,2.52065462842101,1.65678397257579,1.6356013078856,1.05189211963412,0,0,0.179427713218951,0.503653849092235,0,0,0,0,0,0,0,0,0.171853182343688,0.685082519770642,0,0,0,0,0,1.3492355185943,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,1.06485483695602,0.238436189947321,0.145346416632329,0,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p7@Smc4 | |||
}} |
Revision as of 23:45, 3 August 2015
Short description: | p7@Smc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Smc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:5 |
Association with transcript: | 87bp_to_ENSMUST00000149174_5end |
EntrezGene: | 70099 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 8.55e-11 | 29 |
immune organ | 8.55e-11 | 29 |
thymus | 7.07e-09 | 23 |
neck | 7.07e-09 | 23 |
respiratory system epithelium | 7.07e-09 | 23 |
hemolymphoid system gland | 7.07e-09 | 23 |
pharyngeal epithelium | 7.07e-09 | 23 |
thymic region | 7.07e-09 | 23 |
pharyngeal gland | 7.07e-09 | 23 |
entire pharyngeal arch endoderm | 7.07e-09 | 23 |
thymus primordium | 7.07e-09 | 23 |
early pharyngeal endoderm | 7.07e-09 | 23 |
mixed endoderm/mesoderm-derived structure | 1.18e-08 | 35 |
pharynx | 1.85e-08 | 24 |
gland of gut | 1.85e-08 | 24 |
upper respiratory tract | 1.85e-08 | 24 |
chordate pharynx | 1.85e-08 | 24 |
pharyngeal arch system | 1.85e-08 | 24 |
pharyngeal region of foregut | 1.85e-08 | 24 |
primordium | 2.72e-08 | 134 |
endocrine gland | 8.83e-08 | 60 |
segment of respiratory tract | 2.15e-07 | 27 |
foregut | 2.27e-07 | 80 |
gut epithelium | 2.41e-07 | 55 |
gland | 5.35e-07 | 65 |