FFCP PHASE1:Hg19::chr7:114054917..114054938,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13875 | |||
|TSSclassifier=weak | |||
|UniProt=B4DLD9,Q75MZ5,B7ZLK5,O15409 | |||
|association_with_transcript=-113bp_to_ENST00000403559,ENST00000408937,ENST00000462331,NM_001172766,NM_014491,NM_148898,NM_148900,NR_033767,uc003vgw.2,uc003vgx.2,uc003vgz.2,uc003vha.2,uc003vhb.2,uc011kmu.1,uc011kmv.1_5end | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_8_at_FOXP2_5end | |||
|id=chr7:114054917..114054938,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.25e-19;1!UBERON:0006242;4.28e-19;1!UBERON:0009847;2.63e-07;3!UBERON:0003353;2.63e-07;3!UBERON:0006595;4.30e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!9.69e-17!11;UBERON:0007023!1.07e-14!115;UBERON:0001155!2.11e-14!9;UBERON:0000160!1.52e-13!27;UBERON:0005409!1.21e-12!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;1.46e-19;22!UBERON:0004921;5.72e-19;33!UBERON:0000160;2.53e-16;17!UBERON:0000059;2.09e-15;11!UBERON:0001255;1.64e-10;2!UBERON:0001556;1.64e-10;2!UBERON:0001555;3.16e-09;54!UBERON:0001155;5.87e-09;9!UBERON:0001043;2.47e-07;3!UBERON:0002110;3.06e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.38e-17,25;UBERON:0000160,2.43e-16,17;UBERON:0000059,1.94e-15,11;UBERON:0001255,1.57e-10,2;UBERON:0001556,1.57e-10,2;UBERON:0001007,2.16e-09,145;UBERON:0001555,2.16e-09,145;UBERON:0007026,2.16e-09,145;UBERON:0001046,2.98e-09,19;UBERON:0004921,3.20e-09,118;UBERON:0001155,5.64e-09,9;UBERON:0004119,1.87e-08,160;UBERON:0000925,1.87e-08,160;UBERON:0006595,1.87e-08,160;UBERON:0007023,2.01e-07,114;UBERON:0001043,2.47e-07,3;UBERON:0009143,2.47e-07,3;UBERON:0002110,3.35e-07,3;UBERON:0006242,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.921722292925374,0.671028323677248,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,0,7.39825542277002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,4.0690479671536,1.83309043480088,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,3.20063754411784,0,0,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,2.51177897121645,0,0,4.56579360254748,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08043821351123,0.218559560503957,0,8.33504293963279,0,0,0,0.4226557275834,0,0,0,0,0,0,0,1.46067277649303,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0.977931553462932,0,0,0,0 | |||
|short_description=p8@FOXP2 | |||
}} |
Revision as of 18:53, 22 January 2014
Short description: | p8@FOXP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FOXP2_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -113bp_to_ENST00000403559, ENST00000408937, ENST00000462331, NM_001172766, NM_014491, NM_148898, NM_148900, NR_033767, uc003vgw.2, uc003vgx.2, uc003vgz.2, uc003vha.2, uc003vhb.2, uc011kmu.1, uc011kmv.1_5end |
EntrezGene: | FOXP2 |
HGNC: | 13875 |
UniProt: | B4DLD9Q75MZ5B7ZLK5O15409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.38e-17 | 25 |
intestine | 2.43e-16 | 17 |
large intestine | 1.94e-15 | 11 |
urinary bladder | 1.57e-10 | 2 |
lower urinary tract | 1.57e-10 | 2 |
digestive system | 2.16e-09 | 145 |
digestive tract | 2.16e-09 | 145 |
primitive gut | 2.16e-09 | 145 |
hindgut | 2.98e-09 | 19 |
subdivision of digestive tract | 3.20e-09 | 118 |
colon | 5.64e-09 | 9 |
endoderm-derived structure | 1.87e-08 | 160 |
endoderm | 1.87e-08 | 160 |
presumptive endoderm | 1.87e-08 | 160 |
adult organism | 2.01e-07 | 114 |
esophagus | 2.47e-07 | 3 |
esophageal region | 2.47e-07 | 3 |
gallbladder | 3.35e-07 | 3 |
gall bladder primordium | 3.35e-07 | 3 |