FFCP PHASE1:Mm9::chr1:61034742..61034781,+: Difference between revisions
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{{FFCP|EntrezGene=54167|HGNC=|MCL_coexpression_id=1160|UniProt=Q5SUZ8,Q9WVS0,Q3V3X2,Q5SUZ7|association_with_transcript=0bp_to_ENSMUST00000027162,ENSMUST00000102827,NM_017480,uc011wlz.1_5end|description=CAGE_peak_1_at_Icos_5end|id=chr1:61034742..61034781,+|ontology_enrichment_celltype=CL:0000084!1.17e-09!11;CL:0000827!1.17e-09!11;CL:0000838!1.59e-09!12;CL:0000791!1.38e-08!9;CL:0000789!1.38e-08!9;CL:0002420!1.38e-08!9;CL:0002419!1.38e-08!9;CL:0000790!1.38e-08!9;CL:0000542!2.48e-08!13;CL:0000051!2.48e-08!13;CL:0000624!8.89e-08!8|ontology_enrichment_celltype_v019_2=CL:0000084,9.02e-17,11;CL:0000827,9.02e-17,11;CL:0000838,4.27e-15,12;CL:0000791,9.26e-15,9;CL:0000789,9.26e-15,9;CL:0002420,9.26e-15,9;CL:0002419,9.26e-15,9;CL:0000790,9.26e-15,9;CL:0000542,1.11e-13,13;CL:0000051,1.11e-13,13;CL:0000624,3.05e-13,8;CL:0002031,6.83e-11,25;CL:0000893,3.21e-10,6;CL:0002489,3.21e-10,6;CL:0000898,3.21e-10,6;CL:0000809,3.21e-10,6;CL:0000810,3.21e-10,6;CL:0000895,3.21e-10,6;CL:0000808,3.21e-10,6;CL:0000894,3.21e-10,6;CL:0000806,3.21e-10,6;CL:0000807,3.21e-10,6;CL:0000805,3.21e-10,6;CL:0002425,3.21e-10,6;CL:0002436,3.21e-10,6;CL:0002427,3.21e-10,6;CL:0002428,3.21e-10,6;CL:0002429,3.21e-10,6;CL:0002433,3.21e-10,6;CL:0002431,3.21e-10,6;CL:0002432,3.21e-10,6;CL:0000738,1.04e-09,17;CL:0002087,1.04e-09,17;CL:0000988,1.30e-08,32;CL:0002032,1.30e-08,32;CL:0000037,1.30e-08,32;CL:0000837,1.30e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.57e-18!51;UBERON:0000077!3.14e-18!97;UBERON:0004119!1.54e-17!130;UBERON:0000925!1.54e-17!130;UBERON:0006595!1.54e-17!130;UBERON:0001007!7.15e-17!128;UBERON:0001555!7.15e-17!128;UBERON:0007026!7.15e-17!128;UBERON:0001041!8.83e-17!92;UBERON:0002405!1.53e-16!70;UBERON:0004921!6.13e-16!126;UBERON:0004185!6.13e-16!126;UBERON:0004177!8.14e-16!29;UBERON:0003408!6.58e-13!24;UBERON:0002193!1.04e-12!48;UBERON:0006562!1.88e-12!24;UBERON:0001557!1.88e-12!24;UBERON:0001042!1.88e-12!24;UBERON:0008814!1.88e-12!24;UBERON:0009145!1.88e-12!24;UBERON:0002370!2.38e-12!23;UBERON:0000974!2.38e-12!23;UBERON:0004807!2.38e-12!23;UBERON:0005058!2.38e-12!23;UBERON:0003351!2.38e-12!23;UBERON:0009113!2.38e-12!23;UBERON:0003295!2.38e-12!23;UBERON:0009722!2.38e-12!23;UBERON:0005562!2.38e-12!23;UBERON:0007690!2.38e-12!23;UBERON:0001004!4.32e-12!42;UBERON:0005911!5.92e-12!69;UBERON:0000065!1.44e-11!41;UBERON:0002390!3.79e-11!45;UBERON:0003061!3.79e-11!45;UBERON:0002530!4.56e-11!65;UBERON:0003104!2.17e-10!131;UBERON:0009142!2.17e-10!131;UBERON:0000072!6.96e-10!27;UBERON:0003929!1.05e-09!55;UBERON:0002368!1.83e-09!60;UBERON:0000949!6.22e-09!72;UBERON:0000926!4.52e-07!193;UBERON:0004120!4.52e-07!193;UBERON:0006603!4.52e-07!193;UBERON:0000063!8.83e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.88e-30,29;UBERON:0005057,1.88e-30,29;UBERON:0002193,2.06e-26,48;UBERON:0002405,2.06e-26,48;UBERON:0000077,8.46e-26,35;UBERON:0003408,6.36e-25,24;UBERON:0002370,7.32e-24,23;UBERON:0000974,7.32e-24,23;UBERON:0004807,7.32e-24,23;UBERON:0005058,7.32e-24,23;UBERON:0003351,7.32e-24,23;UBERON:0009113,7.32e-24,23;UBERON:0003295,7.32e-24,23;UBERON:0009722,7.32e-24,23;UBERON:0005562,7.32e-24,23;UBERON:0007690,7.32e-24,23;UBERON:0002390,2.60e-23,45;UBERON:0003061,2.60e-23,45;UBERON:0006562,1.37e-22,24;UBERON:0001557,1.37e-22,24;UBERON:0001042,1.37e-22,24;UBERON:0008814,1.37e-22,24;UBERON:0009145,1.37e-22,24;UBERON:0000072,2.41e-19,27;UBERON:0001041,9.83e-19,80;UBERON:0001004,3.86e-18,42;UBERON:0000065,3.31e-17,41;UBERON:0005911,1.87e-14,69;UBERON:0007811,2.41e-14,36;UBERON:0003929,5.01e-14,55;UBERON:0004119,1.14e-13,118;UBERON:0000925,1.14e-13,118;UBERON:0006595,1.14e-13,118;UBERON:0002530,2.01e-13,65;UBERON:0001007,3.34e-13,116;UBERON:0001555,3.34e-13,116;UBERON:0007026,3.34e-13,116;UBERON:0002368,3.58e-12,60;UBERON:0004921,5.03e-12,114;UBERON:0000153,5.82e-11,43;UBERON:0000490,2.45e-10,66;UBERON:0000949,1.43e-09,72;UBERON:0003081,3.33e-09,87;UBERON:0001048,7.33e-08,134;UBERON:0002106,1.18e-07,6;UBERON:0004457,1.18e-07,6;UBERON:0000042,1.18e-07,6;UBERON:0004854,1.18e-07,6;UBERON:0009034,1.18e-07,6;UBERON:0002095,1.18e-07,6;UBERON:0004782,1.18e-07,6;UBERON:0003281,1.18e-07,6;UBERON:0009664,1.18e-07,6;UBERON:0002296,1.18e-07,6;UBERON:0005602,1.18e-07,6;UBERON:0001179,1.18e-07,6;UBERON:0006293,1.18e-07,6|phase1_expression=0,0,0,0,0,0,0,87.9329832637134,261.585445757797,54.3029701067025,84.410458335174,13.6410391882025,82.5187518268412,18.9702273249224,0.999329285446988,3.03712901084739,0,6.15151222448563,7.67840828192137,4.66828616977833,1.44573593256819,2.18440092641948,6.79119451761232,1.75991665072747,1.60586496747019,0,0,0,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,184.967346212893,150.233928216681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12033341332915,0,0,0,0,0,0,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.08296475241462,81.3064954652119,0.890652834388949,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0,0,3.83185582812887,1.67741174308288,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0.515469845288373,1.00841762311671,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.994782360205754,0.779856348476481,0.898819408654221,1.29682829924817,0,0.189667900953082,0,0,0,0,0,0.316182685621286,0.147610147979602,0,0.370191491765402,2.07516838961004,0.500535317148282,0.589676985339609,0.899448449539415,1.42002084971952,0.964708639009667,2.29163266603278,1.43848068725405,0.486405680325106,1.09824565275233,4.31304619582064,4.09355042435354,4.05648975048929,0.757736633841335,0.896987067609561,0.482443521363367,7.7596339869974,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,1.55025282754142,0.797273843287435,2.62181303545181,2.24490476425664,1.88043776155965,0,0.54390568381871,0.983528546038072,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,1.31976098378028,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0.712994756769443,1.26414703174326,0,0,0,0,0,0,0,0,0,0,3.52007562095566,0.21183207086382,0.220528398054962,1.6488625294148,0,0.120625849856312,0.358117032009409,0,0.582961673259701,0,8.88528580148834,2.06386867963222,1.66675074632741,2.0720530270516,7.38148829693536,6.86334519619568,2.71965487990169,1.53946597556024,3.17859939750175,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.578574190077352,0.523511883968059,0.388844919875379,3.10669656543463,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,15.1685337901526,4.45995473638361,8.21687657318618,5.84643703400078,4.29664069601955,9.53670502950071,12.1397404015169,10.3382669022204,11.0053430443481,11.58343461156,13.3090564380629,21.635649524225,15.5863183457334,20.6872116861377,0.453460767230423,0,0,0,0.772758376128762,6.94425159169373,0.73260649706906,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.229741875822453,0.476293691283074,0,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0,0.407412341537585,0,0.355905054372522,0,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p1@Icos}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54167 | |||
|HGNC= | |||
|MCL_coexpression_id=1160 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5SUZ8,uniprot:Q9WVS0,uniprot:Q3V3X2,uniprot:Q5SUZ7 | |||
|association_with_transcript=0bp_to_ENSMUST00000027162,ENSMUST00000102827,NM_017480,uc011wlz.1_5end | |||
|cluster_id=chr1:61034742..61034781,+ | |||
|description=CAGE_peak_1_at_Icos_5end | |||
|id=chr1:61034742..61034781,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.17e-09!11;CL:0000827!1.17e-09!11;CL:0000838!1.59e-09!12;CL:0000791!1.38e-08!9;CL:0000789!1.38e-08!9;CL:0002420!1.38e-08!9;CL:0002419!1.38e-08!9;CL:0000790!1.38e-08!9;CL:0000542!2.48e-08!13;CL:0000051!2.48e-08!13;CL:0000624!8.89e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,9.02e-17,11;CL:0000827,9.02e-17,11;CL:0000838,4.27e-15,12;CL:0000791,9.26e-15,9;CL:0000789,9.26e-15,9;CL:0002420,9.26e-15,9;CL:0002419,9.26e-15,9;CL:0000790,9.26e-15,9;CL:0000542,1.11e-13,13;CL:0000051,1.11e-13,13;CL:0000624,3.05e-13,8;CL:0002031,6.83e-11,25;CL:0000893,3.21e-10,6;CL:0002489,3.21e-10,6;CL:0000898,3.21e-10,6;CL:0000809,3.21e-10,6;CL:0000810,3.21e-10,6;CL:0000895,3.21e-10,6;CL:0000808,3.21e-10,6;CL:0000894,3.21e-10,6;CL:0000806,3.21e-10,6;CL:0000807,3.21e-10,6;CL:0000805,3.21e-10,6;CL:0002425,3.21e-10,6;CL:0002436,3.21e-10,6;CL:0002427,3.21e-10,6;CL:0002428,3.21e-10,6;CL:0002429,3.21e-10,6;CL:0002433,3.21e-10,6;CL:0002431,3.21e-10,6;CL:0002432,3.21e-10,6;CL:0000738,1.04e-09,17;CL:0002087,1.04e-09,17;CL:0000988,1.30e-08,32;CL:0002032,1.30e-08,32;CL:0000037,1.30e-08,32;CL:0000837,1.30e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.57e-18!51;UBERON:0000077!3.14e-18!97;UBERON:0004119!1.54e-17!130;UBERON:0000925!1.54e-17!130;UBERON:0006595!1.54e-17!130;UBERON:0001007!7.15e-17!128;UBERON:0001555!7.15e-17!128;UBERON:0007026!7.15e-17!128;UBERON:0001041!8.83e-17!92;UBERON:0002405!1.53e-16!70;UBERON:0004921!6.13e-16!126;UBERON:0004185!6.13e-16!126;UBERON:0004177!8.14e-16!29;UBERON:0003408!6.58e-13!24;UBERON:0002193!1.04e-12!48;UBERON:0006562!1.88e-12!24;UBERON:0001557!1.88e-12!24;UBERON:0001042!1.88e-12!24;UBERON:0008814!1.88e-12!24;UBERON:0009145!1.88e-12!24;UBERON:0002370!2.38e-12!23;UBERON:0000974!2.38e-12!23;UBERON:0004807!2.38e-12!23;UBERON:0005058!2.38e-12!23;UBERON:0003351!2.38e-12!23;UBERON:0009113!2.38e-12!23;UBERON:0003295!2.38e-12!23;UBERON:0009722!2.38e-12!23;UBERON:0005562!2.38e-12!23;UBERON:0007690!2.38e-12!23;UBERON:0001004!4.32e-12!42;UBERON:0005911!5.92e-12!69;UBERON:0000065!1.44e-11!41;UBERON:0002390!3.79e-11!45;UBERON:0003061!3.79e-11!45;UBERON:0002530!4.56e-11!65;UBERON:0003104!2.17e-10!131;UBERON:0009142!2.17e-10!131;UBERON:0000072!6.96e-10!27;UBERON:0003929!1.05e-09!55;UBERON:0002368!1.83e-09!60;UBERON:0000949!6.22e-09!72;UBERON:0000926!4.52e-07!193;UBERON:0004120!4.52e-07!193;UBERON:0006603!4.52e-07!193;UBERON:0000063!8.83e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.88e-30,29;UBERON:0005057,1.88e-30,29;UBERON:0002193,2.06e-26,48;UBERON:0002405,2.06e-26,48;UBERON:0000077,8.46e-26,35;UBERON:0003408,6.36e-25,24;UBERON:0002370,7.32e-24,23;UBERON:0000974,7.32e-24,23;UBERON:0004807,7.32e-24,23;UBERON:0005058,7.32e-24,23;UBERON:0003351,7.32e-24,23;UBERON:0009113,7.32e-24,23;UBERON:0003295,7.32e-24,23;UBERON:0009722,7.32e-24,23;UBERON:0005562,7.32e-24,23;UBERON:0007690,7.32e-24,23;UBERON:0002390,2.60e-23,45;UBERON:0003061,2.60e-23,45;UBERON:0006562,1.37e-22,24;UBERON:0001557,1.37e-22,24;UBERON:0001042,1.37e-22,24;UBERON:0008814,1.37e-22,24;UBERON:0009145,1.37e-22,24;UBERON:0000072,2.41e-19,27;UBERON:0001041,9.83e-19,80;UBERON:0001004,3.86e-18,42;UBERON:0000065,3.31e-17,41;UBERON:0005911,1.87e-14,69;UBERON:0007811,2.41e-14,36;UBERON:0003929,5.01e-14,55;UBERON:0004119,1.14e-13,118;UBERON:0000925,1.14e-13,118;UBERON:0006595,1.14e-13,118;UBERON:0002530,2.01e-13,65;UBERON:0001007,3.34e-13,116;UBERON:0001555,3.34e-13,116;UBERON:0007026,3.34e-13,116;UBERON:0002368,3.58e-12,60;UBERON:0004921,5.03e-12,114;UBERON:0000153,5.82e-11,43;UBERON:0000490,2.45e-10,66;UBERON:0000949,1.43e-09,72;UBERON:0003081,3.33e-09,87;UBERON:0001048,7.33e-08,134;UBERON:0002106,1.18e-07,6;UBERON:0004457,1.18e-07,6;UBERON:0000042,1.18e-07,6;UBERON:0004854,1.18e-07,6;UBERON:0009034,1.18e-07,6;UBERON:0002095,1.18e-07,6;UBERON:0004782,1.18e-07,6;UBERON:0003281,1.18e-07,6;UBERON:0009664,1.18e-07,6;UBERON:0002296,1.18e-07,6;UBERON:0005602,1.18e-07,6;UBERON:0001179,1.18e-07,6;UBERON:0006293,1.18e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,87.9329832637134,261.585445757797,54.3029701067025,84.410458335174,13.6410391882025,82.5187518268412,18.9702273249224,0.999329285446988,3.03712901084739,0,6.15151222448563,7.67840828192137,4.66828616977833,1.44573593256819,2.18440092641948,6.79119451761232,1.75991665072747,1.60586496747019,0,0,0,0,0.756090389279792,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,184.967346212893,150.233928216681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12033341332915,0,0,0,0,0,0,0.896053774194671,0.702222100658759,0,0,0,0,0,0,0,0,0,0,3.08296475241462,81.3064954652119,0.890652834388949,0.173485326766136,0,0,0.452167921657868,0.470354828542819,0,0,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0,0,3.83185582812887,1.67741174308288,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0.834141747676794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,0,0,0,0.264450566663544,0,0,0.515469845288373,1.00841762311671,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.754005626400808,0.994782360205754,0.779856348476481,0.898819408654221,1.29682829924817,0,0.189667900953082,0,0,0,0,0,0.316182685621286,0.147610147979602,0,0.370191491765402,2.07516838961004,0.500535317148282,0.589676985339609,0.899448449539415,1.42002084971952,0.964708639009667,2.29163266603278,1.43848068725405,0.486405680325106,1.09824565275233,4.31304619582064,4.09355042435354,4.05648975048929,0.757736633841335,0.896987067609561,0.482443521363367,7.7596339869974,0,0.162964976442026,0.169745085775188,0,0.335012514883631,0.238043640886014,0.195133647857799,0.630540576424764,1.55025282754142,0.797273843287435,2.62181303545181,2.24490476425664,1.88043776155965,0,0.54390568381871,0.983528546038072,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0,1.31976098378028,0,0,0,0.188605079755898,0.590603785761546,0.614870295887855,0.258428293168221,0.363533729477506,0.712994756769443,1.26414703174326,0,0,0,0,0,0,0,0,0,0,3.52007562095566,0.21183207086382,0.220528398054962,1.6488625294148,0,0.120625849856312,0.358117032009409,0,0.582961673259701,0,8.88528580148834,2.06386867963222,1.66675074632741,2.0720530270516,7.38148829693536,6.86334519619568,2.71965487990169,1.53946597556024,3.17859939750175,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.578574190077352,0.523511883968059,0.388844919875379,3.10669656543463,0,0,0.165458490457098,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,15.1685337901526,4.45995473638361,8.21687657318618,5.84643703400078,4.29664069601955,9.53670502950071,12.1397404015169,10.3382669022204,11.0053430443481,11.58343461156,13.3090564380629,21.635649524225,15.5863183457334,20.6872116861377,0.453460767230423,0,0,0,0.772758376128762,6.94425159169373,0.73260649706906,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.44449345560323,0,0.320919209591815,0,0,0.377252682772152,0.280924522409647,0.0640251524048693,0.229741875822453,0.476293691283074,0,0.578727661391115,0.824171801606613,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0,0.407412341537585,0,0.355905054372522,0,0,0.464810523557898,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p1@Icos | |||
}} |
Revision as of 20:14, 5 August 2015
Short description: | p1@Icos |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Icos_5end |
Coexpression cluster: | MCL_coexpression_mm9:1160 |
Association with transcript: | 0bp_to_ENSMUST00000027162, ENSMUST00000102827, NM_017480, uc011wlz.1_5end |
EntrezGene: | 54167 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data