FFCP PHASE1:Mm9::chr1:58852500..58852511,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12370|HGNC=|MCL_coexpression_id=345|UniProt=O89110,Q3U607|association_with_transcript=282bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end|description=CAGE_peak_8_at_Casp8_5end|id=chr1:58852500..58852511,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000838,2.30e-07,12;CL:0000791,2.67e-07,9;CL:0000789,2.67e-07,9;CL:0002420,2.67e-07,9;CL:0002419,2.67e-07,9;CL:0000790,2.67e-07,9;CL:0000624,5.29e-07,8;CL:0000084,9.44e-07,11;CL:0000827,9.44e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!6.46e-13!128;UBERON:0001555!6.46e-13!128;UBERON:0007026!6.46e-13!128;UBERON:0004119!1.08e-12!130;UBERON:0000925!1.08e-12!130;UBERON:0006595!1.08e-12!130;UBERON:0004921!3.87e-12!126;UBERON:0004185!3.87e-12!126;UBERON:0005911!6.53e-09!69;UBERON:0002405!2.11e-08!70;UBERON:0005057!5.78e-08!51;UBERON:0003104!1.25e-07!131;UBERON:0009142!1.25e-07!131;UBERON:0003929!1.65e-07!55;UBERON:0000065!2.94e-07!41;UBERON:0000926!3.07e-07!193;UBERON:0004120!3.07e-07!193;UBERON:0006603!3.07e-07!193;UBERON:0000490!7.74e-07!66;UBERON:0002370!8.58e-07!23;UBERON:0000974!8.58e-07!23;UBERON:0004807!8.58e-07!23;UBERON:0005058!8.58e-07!23;UBERON:0003351!8.58e-07!23;UBERON:0009113!8.58e-07!23;UBERON:0003295!8.58e-07!23;UBERON:0009722!8.58e-07!23;UBERON:0005562!8.58e-07!23;UBERON:0007690!8.58e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.40e-17,116;UBERON:0001555,1.40e-17,116;UBERON:0007026,1.40e-17,116;UBERON:0004119,5.66e-17,118;UBERON:0000925,5.66e-17,118;UBERON:0006595,5.66e-17,118;UBERON:0004921,2.40e-16,114;UBERON:0003929,1.04e-11,55;UBERON:0002193,1.73e-10,48;UBERON:0002405,1.73e-10,48;UBERON:0002370,5.58e-10,23;UBERON:0000974,5.58e-10,23;UBERON:0004807,5.58e-10,23;UBERON:0005058,5.58e-10,23;UBERON:0003351,5.58e-10,23;UBERON:0009113,5.58e-10,23;UBERON:0003295,5.58e-10,23;UBERON:0009722,5.58e-10,23;UBERON:0005562,5.58e-10,23;UBERON:0007690,5.58e-10,23;UBERON:0005911,1.04e-09,69;UBERON:0006562,2.41e-09,24;UBERON:0003408,2.41e-09,24;UBERON:0001557,2.41e-09,24;UBERON:0001042,2.41e-09,24;UBERON:0008814,2.41e-09,24;UBERON:0009145,2.41e-09,24;UBERON:0001041,3.24e-09,80;UBERON:0004177,7.61e-09,29;UBERON:0005057,7.61e-09,29;UBERON:0000490,8.95e-09,66;UBERON:0000072,1.33e-08,27;UBERON:0002390,1.42e-08,45;UBERON:0003061,1.42e-08,45;UBERON:0005409,3.02e-08,47;UBERON:0000077,6.82e-08,35;UBERON:0000160,3.76e-07,31|phase1_expression=0.160148847104794,2.09385244583617,2.27499619694768,1.51232105653415,1.00179145989269,1.51091344720701,0.233612640595526,10.3298658753261,1.267098499365,2.34064526321993,0.68487187290202,1.35612670292072,3.76641605848653,2.27293046289393,0.333109761815663,1.01237633694913,0,2.05050407482854,2.87940310572051,0.42438965179803,0.765389611359628,0.893618560807968,1.04479915655574,1.43993180514066,1.37645568640302,1.14846392823004,1.7230479846363,1.50829862880122,2.09025761402011,0.504060259519861,2.21730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,1.36609096991689,0.485510353031154,0.629484089877886,0.506884656097573,0.734187008646726,0,0,0,0.58328969722285,0.55994568650145,0,1.34226084846189,4.35217285206807,1.00828139742739,1.02903774414379,0.573066879877513,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.68014404096107,1.15945795480671,4.30211938490693,0,0.539703191637817,1.29955283489534,1.34408066129201,0.842666520790511,0.170430322578058,0.519572009205738,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0.79928715803342,10.0985774622397,0.148442139064825,0.346970653532272,0.913396434936424,1.38369298353635,0.904335843315735,0.705532242814229,0.879666139307728,0.741584903203122,0.722996784599558,1.76922110389975,0.485300549842228,1.32504911076236,0.484875253135222,1.86391761218122,0,0.209446706813455,1.78819938646014,0.838705871541442,0.599902730993408,1.27070227073065,0,0,0,0.347648640384553,0.255715457330331,0,0,0.611036183101898,0.248813941220186,0,0.420883711772948,0.390361328888111,0.459804208866946,0.360124259610698,0.452114453507145,0.136072998302656,0.12811372028485,0.374806898238915,0.258703370739016,0.646703978798527,1.32374256117473,1.58356011747554,1.31517439456545,0.278047249225598,0.348252166522167,1.23469281844766,0.398068533636986,1.40442637462647,0.51469581422943,2.27330799516474,0.414251545071004,0.703578179943289,0,0.473489471170421,1.77087808572663,0,0.465067889500816,0,0.233530684734339,0.329119699826961,1.31333971263276,0.729619285912702,0.438599962275997,0.439100230582101,0.805238512562231,0.210289948564127,0.308713837137853,5.61711931072457,0.528901133327089,0.853153002140936,0.696710015581316,0.515469845288373,1.4117846723634,1.55664630691409,0.570676878337677,1.89811624617805,0.658795818896044,1.00534083520108,0.397912944082302,1.75467678407208,0.898819408654221,1.94524244887225,1.59313018603494,0.948339504765408,0.685491075658373,1.1270773567308,0.814605311381257,0.775809948670503,0.561086559122548,0.632365371242573,1.03327103585722,0.784993639206874,0.493588655687202,3.55743152504579,0.83422552858047,0.589676985339609,0.449724224769707,0.405720242777006,0.482354319504834,0.50925170356284,1.43848068725405,0.648540907100142,0,2.87536413054709,0.744281895337007,1.5601883655728,1.26289438973556,1.61457672169721,0,0.923765950833023,0.37898282354097,0.651859905768103,0.339490171550376,0.704070744865506,0.837531287209079,0.952174563544055,0.585400943573396,1.10344600874334,0.44292937929755,0.956728611944923,0.81931657357869,1.55416483679306,2.16973587872267,0,1.63171705145613,0.491764273019036,1.65562047782839,0.160550589987792,0.117211686592203,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,1.61924280669958,0.876767573733936,0.790575555893047,0,0.567760340833074,0.35613120733451,0.81443479676788,0.659880491890142,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.493647061806363,0,0.23467170806371,0.63549621259146,0,0.49465875882444,0.161464426695906,0.904693873922338,0.119372344003136,0.492422699235184,1.1659233465194,0,0.512612642393558,0.206386867963223,1.11116716421827,0.941842285023455,0.410082683163076,1.60144721244566,0.849892149969277,0.69975726161829,0.138199973804424,0.954670618015114,0.316335993581135,1.21991680276109,0.648032044930808,0.627264888043406,1.52853794622324,1.21377911746339,1.1571483801547,1.30877970992015,2.07383957266869,0,0.56369293868419,0,0.496375471371293,0.388902376688095,0,0,0.117357238645754,0.2604087696879,0.629156066554265,0,0.288030006257865,1.26404448251271,1.41907650703115,0.718976700153791,0.77952493786677,1.25318686967237,1.58945083825012,1.20195449519969,1.9199638532695,1.41353029927407,1.295515713135,1.41156659191577,1.07203668813728,1.44317762460494,1.63627663054197,0.226730383615211,0,0,0.167884616364078,0.772758376128762,1.12609485270709,0.73260649706906,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.367687016900028,1.33348036680969,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.468207537349412,0.384150914429216,0.402048282689293,0,0.927074607558844,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0,0.145346416632329,0.564656282491984,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.929621047115796,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p8@Casp8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12370 | |||
|HGNC= | |||
|MCL_coexpression_id=345 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O89110,uniprot:Q3U607 | |||
|association_with_transcript=282bp_to_ENSMUST00000027189,NM_009812,uc007bcs.1_5end | |||
|cluster_id=chr1:58852500..58852511,+ | |||
|description=CAGE_peak_8_at_Casp8_5end | |||
|id=chr1:58852500..58852511,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.30e-07,12;CL:0000791,2.67e-07,9;CL:0000789,2.67e-07,9;CL:0002420,2.67e-07,9;CL:0002419,2.67e-07,9;CL:0000790,2.67e-07,9;CL:0000624,5.29e-07,8;CL:0000084,9.44e-07,11;CL:0000827,9.44e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!6.46e-13!128;UBERON:0001555!6.46e-13!128;UBERON:0007026!6.46e-13!128;UBERON:0004119!1.08e-12!130;UBERON:0000925!1.08e-12!130;UBERON:0006595!1.08e-12!130;UBERON:0004921!3.87e-12!126;UBERON:0004185!3.87e-12!126;UBERON:0005911!6.53e-09!69;UBERON:0002405!2.11e-08!70;UBERON:0005057!5.78e-08!51;UBERON:0003104!1.25e-07!131;UBERON:0009142!1.25e-07!131;UBERON:0003929!1.65e-07!55;UBERON:0000065!2.94e-07!41;UBERON:0000926!3.07e-07!193;UBERON:0004120!3.07e-07!193;UBERON:0006603!3.07e-07!193;UBERON:0000490!7.74e-07!66;UBERON:0002370!8.58e-07!23;UBERON:0000974!8.58e-07!23;UBERON:0004807!8.58e-07!23;UBERON:0005058!8.58e-07!23;UBERON:0003351!8.58e-07!23;UBERON:0009113!8.58e-07!23;UBERON:0003295!8.58e-07!23;UBERON:0009722!8.58e-07!23;UBERON:0005562!8.58e-07!23;UBERON:0007690!8.58e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,1.40e-17,116;UBERON:0001555,1.40e-17,116;UBERON:0007026,1.40e-17,116;UBERON:0004119,5.66e-17,118;UBERON:0000925,5.66e-17,118;UBERON:0006595,5.66e-17,118;UBERON:0004921,2.40e-16,114;UBERON:0003929,1.04e-11,55;UBERON:0002193,1.73e-10,48;UBERON:0002405,1.73e-10,48;UBERON:0002370,5.58e-10,23;UBERON:0000974,5.58e-10,23;UBERON:0004807,5.58e-10,23;UBERON:0005058,5.58e-10,23;UBERON:0003351,5.58e-10,23;UBERON:0009113,5.58e-10,23;UBERON:0003295,5.58e-10,23;UBERON:0009722,5.58e-10,23;UBERON:0005562,5.58e-10,23;UBERON:0007690,5.58e-10,23;UBERON:0005911,1.04e-09,69;UBERON:0006562,2.41e-09,24;UBERON:0003408,2.41e-09,24;UBERON:0001557,2.41e-09,24;UBERON:0001042,2.41e-09,24;UBERON:0008814,2.41e-09,24;UBERON:0009145,2.41e-09,24;UBERON:0001041,3.24e-09,80;UBERON:0004177,7.61e-09,29;UBERON:0005057,7.61e-09,29;UBERON:0000490,8.95e-09,66;UBERON:0000072,1.33e-08,27;UBERON:0002390,1.42e-08,45;UBERON:0003061,1.42e-08,45;UBERON:0005409,3.02e-08,47;UBERON:0000077,6.82e-08,35;UBERON:0000160,3.76e-07,31 | |||
|phase1_expression=0.160148847104794,2.09385244583617,2.27499619694768,1.51232105653415,1.00179145989269,1.51091344720701,0.233612640595526,10.3298658753261,1.267098499365,2.34064526321993,0.68487187290202,1.35612670292072,3.76641605848653,2.27293046289393,0.333109761815663,1.01237633694913,0,2.05050407482854,2.87940310572051,0.42438965179803,0.765389611359628,0.893618560807968,1.04479915655574,1.43993180514066,1.37645568640302,1.14846392823004,1.7230479846363,1.50829862880122,2.09025761402011,0.504060259519861,2.21730510655305,0,0,0,0,0.332469290716985,0.204169356262369,0.418531630736908,0.7813353445238,0.523523743973798,0.588231488031014,1.36609096991689,0.485510353031154,0.629484089877886,0.506884656097573,0.734187008646726,0,0,0,0.58328969722285,0.55994568650145,0,1.34226084846189,4.35217285206807,1.00828139742739,1.02903774414379,0.573066879877513,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0.299600110518405,0,0.103689612308478,0.135005938331691,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0.227178579999552,0.68014404096107,1.15945795480671,4.30211938490693,0,0.539703191637817,1.29955283489534,1.34408066129201,0.842666520790511,0.170430322578058,0.519572009205738,0.35333957451034,0.14084341977668,1.28326477414318,0,0,0.865964164044856,0.253359865475099,1.01104889002957,0.79928715803342,10.0985774622397,0.148442139064825,0.346970653532272,0.913396434936424,1.38369298353635,0.904335843315735,0.705532242814229,0.879666139307728,0.741584903203122,0.722996784599558,1.76922110389975,0.485300549842228,1.32504911076236,0.484875253135222,1.86391761218122,0,0.209446706813455,1.78819938646014,0.838705871541442,0.599902730993408,1.27070227073065,0,0,0,0.347648640384553,0.255715457330331,0,0,0.611036183101898,0.248813941220186,0,0.420883711772948,0.390361328888111,0.459804208866946,0.360124259610698,0.452114453507145,0.136072998302656,0.12811372028485,0.374806898238915,0.258703370739016,0.646703978798527,1.32374256117473,1.58356011747554,1.31517439456545,0.278047249225598,0.348252166522167,1.23469281844766,0.398068533636986,1.40442637462647,0.51469581422943,2.27330799516474,0.414251545071004,0.703578179943289,0,0.473489471170421,1.77087808572663,0,0.465067889500816,0,0.233530684734339,0.329119699826961,1.31333971263276,0.729619285912702,0.438599962275997,0.439100230582101,0.805238512562231,0.210289948564127,0.308713837137853,5.61711931072457,0.528901133327089,0.853153002140936,0.696710015581316,0.515469845288373,1.4117846723634,1.55664630691409,0.570676878337677,1.89811624617805,0.658795818896044,1.00534083520108,0.397912944082302,1.75467678407208,0.898819408654221,1.94524244887225,1.59313018603494,0.948339504765408,0.685491075658373,1.1270773567308,0.814605311381257,0.775809948670503,0.561086559122548,0.632365371242573,1.03327103585722,0.784993639206874,0.493588655687202,3.55743152504579,0.83422552858047,0.589676985339609,0.449724224769707,0.405720242777006,0.482354319504834,0.50925170356284,1.43848068725405,0.648540907100142,0,2.87536413054709,0.744281895337007,1.5601883655728,1.26289438973556,1.61457672169721,0,0.923765950833023,0.37898282354097,0.651859905768103,0.339490171550376,0.704070744865506,0.837531287209079,0.952174563544055,0.585400943573396,1.10344600874334,0.44292937929755,0.956728611944923,0.81931657357869,1.55416483679306,2.16973587872267,0,1.63171705145613,0.491764273019036,1.65562047782839,0.160550589987792,0.117211686592203,0.327869890753351,1.00988370881749,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0.222798674082394,0.283076530788832,1.61924280669958,0.876767573733936,0.790575555893047,0,0.567760340833074,0.35613120733451,0.81443479676788,0.659880491890142,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0.614870295887855,0,0,0,0.316036757935816,0,0,0.340439605753788,0.36012218806262,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.493647061806363,0,0.23467170806371,0.63549621259146,0,0.49465875882444,0.161464426695906,0.904693873922338,0.119372344003136,0.492422699235184,1.1659233465194,0,0.512612642393558,0.206386867963223,1.11116716421827,0.941842285023455,0.410082683163076,1.60144721244566,0.849892149969277,0.69975726161829,0.138199973804424,0.954670618015114,0.316335993581135,1.21991680276109,0.648032044930808,0.627264888043406,1.52853794622324,1.21377911746339,1.1571483801547,1.30877970992015,2.07383957266869,0,0.56369293868419,0,0.496375471371293,0.388902376688095,0,0,0.117357238645754,0.2604087696879,0.629156066554265,0,0.288030006257865,1.26404448251271,1.41907650703115,0.718976700153791,0.77952493786677,1.25318686967237,1.58945083825012,1.20195449519969,1.9199638532695,1.41353029927407,1.295515713135,1.41156659191577,1.07203668813728,1.44317762460494,1.63627663054197,0.226730383615211,0,0,0.167884616364078,0.772758376128762,1.12609485270709,0.73260649706906,1.07184189539533,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.729320151204882,0.209613162627982,0.367687016900028,1.33348036680969,0.206035057238894,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.468207537349412,0.384150914429216,0.402048282689293,0,0.927074607558844,0.192909220463705,0,0.147198920134397,0.342869252385415,0.887379030796687,0,0.145346416632329,0.564656282491984,0.338458431566706,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.474540072496697,0.689531376628944,0.818462086339379,0.929621047115796,0.578719832943424,0.749431733813838,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p8@Casp8 | |||
}} |
Revision as of 19:23, 5 August 2015
Short description: | p8@Casp8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Casp8_5end |
Coexpression cluster: | MCL_coexpression_mm9:345 |
Association with transcript: | 282bp_to_ENSMUST00000027189, NM_009812, uc007bcs.1_5end |
EntrezGene: | 12370 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.30e-07 | 12 |
mature alpha-beta T cell | 2.67e-07 | 9 |
alpha-beta T cell | 2.67e-07 | 9 |
immature T cell | 2.67e-07 | 9 |
mature T cell | 2.67e-07 | 9 |
immature alpha-beta T cell | 2.67e-07 | 9 |
CD4-positive, alpha-beta T cell | 5.29e-07 | 8 |
T cell | 9.44e-07 | 11 |
pro-T cell | 9.44e-07 | 11 |