FFCP PHASE1:Hg19::chr4:176923592..176923603,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2823 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4460 | |||
|TSSclassifier=strong | |||
|UniProt=P51674,E9PHI5 | |||
|association_with_transcript=44bp_to_NM_005277,NM_201592,uc003iug.2,uc003iuh.2_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_11_at_GPM6A_5end | |||
|id=chr4:176923592..176923603,- | |||
|ontology_enrichment_celltype=CL:0000945!1.57e-17!24;CL:0000826!1.57e-17!24;CL:0000236!5.17e-09!14 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000785,4.81e-07,2;CL:0000955,4.81e-07,2;CL:0000818,4.81e-07,2;CL:0000954,4.81e-07,2;CL:0000816,4.81e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.24e-18;82!UBERON:0010122;2.13e-07;2!CL:0000954;6.20e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!5.55e-70!86;UBERON:0000073!3.59e-67!94;UBERON:0001016!3.59e-67!94;UBERON:0001017!4.36e-65!82;UBERON:0001049!1.52e-62!57;UBERON:0005068!1.52e-62!57;UBERON:0006241!1.52e-62!57;UBERON:0007135!1.52e-62!57;UBERON:0000955!5.71e-56!69;UBERON:0006238!5.71e-56!69;UBERON:0003080!1.88e-53!42;UBERON:0002616!3.92e-52!59;UBERON:0002780!4.06e-52!41;UBERON:0001890!4.06e-52!41;UBERON:0006240!4.06e-52!41;UBERON:0003075!1.05e-51!86;UBERON:0007284!1.05e-51!86;UBERON:0007023!6.24e-50!115;UBERON:0001893!8.90e-49!34;UBERON:0002346!1.61e-48!90;UBERON:0002020!1.72e-48!34;UBERON:0003528!1.72e-48!34;UBERON:0002791!2.84e-47!33;UBERON:0003056!2.62e-46!61;UBERON:0001869!4.96e-46!32;UBERON:0000956!1.03e-35!25;UBERON:0000203!1.03e-35!25;UBERON:0000033!7.65e-35!123;UBERON:0000153!1.68e-33!129;UBERON:0007811!1.68e-33!129;UBERON:0004121!6.00e-33!169;UBERON:0002619!2.35e-32!22;UBERON:0000924!1.17e-31!173;UBERON:0006601!1.17e-31!173;UBERON:0001950!2.73e-29!20;UBERON:0002420!1.11e-14!9;UBERON:0007245!1.11e-14!9;UBERON:0010009!1.11e-14!9;UBERON:0010011!1.11e-14!9;UBERON:0000454!1.11e-14!9;UBERON:0002308!5.33e-14!9;UBERON:0000125!5.33e-14!9;UBERON:0000025!5.62e-13!194;UBERON:0002298!9.93e-12!8;UBERON:0009663!1.75e-11!7;UBERON:0000200!6.02e-11!6;UBERON:0003076!1.01e-10!15;UBERON:0003057!1.01e-10!15;UBERON:0001871!2.14e-10!7;UBERON:0004111!4.14e-10!241;UBERON:0000064!1.21e-09!219;UBERON:0000349!2.09e-09!5;UBERON:0001872!6.80e-09!5;UBERON:0002021!1.18e-08!5;UBERON:0000477!1.36e-08!286;UBERON:0000483!1.61e-08!309;UBERON:0004732!1.92e-08!13;UBERON:0000119!2.91e-08!312;UBERON:0000369!1.48e-07!4;UBERON:0002435!1.48e-07!4;UBERON:0000204!1.48e-07!4;UBERON:0010082!1.48e-07!4;UBERON:0004733!2.37e-07!12;UBERON:0002028!2.37e-07!12;UBERON:0007277!2.37e-07!12;UBERON:0000475!2.65e-07!365;UBERON:0000966!6.16e-07!5;UBERON:0005388!6.16e-07!5;UBERON:0001802!6.16e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;1.83e-65;34!UBERON:0002020;1.83e-65;34!UBERON:0001893;2.89e-65;34!UBERON:0001869;4.25e-64;32!UBERON:0002791;8.33e-64;32!UBERON:0002780;1.77e-56;41!UBERON:0001890;1.77e-56;41!UBERON:0002619;6.46e-56;22!UBERON:0000956;2.22e-53;25!UBERON:0000203;2.22e-53;25!UBERON:0000073;3.39e-53;53!UBERON:0002616;3.39e-53;53!UBERON:0001950;4.85e-50;20!UBERON:0000955;3.37e-35;68!UBERON:0001017;1.68e-34;75!UBERON:0001016;2.78e-28;83!UBERON:0002420;2.70e-26;9!UBERON:0007245;2.70e-26;9!UBERON:0010009;2.70e-26;9!UBERON:0010011;2.70e-26;9!UBERON:0000454;2.70e-26;9!UBERON:0000125;5.81e-25;9!UBERON:0002308;5.81e-25;9!UBERON:0009663;3.24e-20;7!UBERON:0000200;2.33e-19;6!UBERON:0000349;1.62e-16;5!UBERON:0002298;5.55e-16;6!UBERON:0004732;9.76e-16;13!UBERON:0001872;1.33e-15;5!UBERON:0002021;6.55e-15;5!UBERON:0007023;4.75e-14;114!UBERON:0004733;1.28e-13;12!UBERON:0002028;1.28e-13;12!UBERON:0000369;6.77e-13;4!UBERON:0002435;6.77e-13;4!UBERON:0000204;6.77e-13;4!UBERON:0001871;9.50e-12;6!UBERON:0011216;6.10e-11;132!UBERON:0001870;1.06e-10;3!UBERON:0005383;5.21e-10;3!UBERON:0005382;5.21e-10;3!UBERON:0000988;7.75e-09;3!UBERON:0001896;7.75e-09;3!UBERON:0005290;7.75e-09;3!UBERON:0010314;1.36e-08;132!UBERON:0001876;8.36e-08;2!UBERON:0002702;8.36e-08;2!UBERON:0002680;1.27e-07;9!UBERON:0001895;1.27e-07;9!UBERON:0002771;1.27e-07;2!UBERON:0001954;1.63e-07;2!UBERON:0003022;1.63e-07;2!UBERON:0002421;1.63e-07;2!UBERON:0002600;1.63e-07;2!UBERON:0001873;2.13e-07;2!UBERON:0002784;3.68e-07;4!UBERON:0001894;4.97e-07;7!UBERON:0001897;5.02e-07;2!UBERON:0010225;5.02e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.29e-97,56;UBERON:0005068,2.29e-97,56;UBERON:0006241,2.29e-97,56;UBERON:0007135,2.29e-97,56;UBERON:0000073,5.94e-94,53;UBERON:0002616,5.94e-94,53;UBERON:0001017,9.28e-84,81;UBERON:0002780,1.02e-81,41;UBERON:0001890,1.02e-81,41;UBERON:0003080,1.02e-81,41;UBERON:0006240,1.02e-81,41;UBERON:0000955,1.23e-81,68;UBERON:0006238,1.23e-81,68;UBERON:0001893,6.71e-78,34;UBERON:0001016,1.91e-77,89;UBERON:0003528,2.15e-77,34;UBERON:0002020,2.15e-77,34;UBERON:0003075,1.07e-72,82;UBERON:0007284,1.07e-72,82;UBERON:0001869,1.08e-72,32;UBERON:0002791,2.23e-72,32;UBERON:0002346,8.65e-69,86;UBERON:0003056,3.81e-62,61;UBERON:0002619,7.66e-56,22;UBERON:0010371,6.83e-55,104;UBERON:0000956,2.56e-53,25;UBERON:0000203,2.56e-53,25;UBERON:0001950,5.13e-50,20;UBERON:0007023,1.58e-47,114;UBERON:0010314,6.07e-43,132;UBERON:0004121,2.61e-38,171;UBERON:0000924,2.61e-38,171;UBERON:0006601,2.61e-38,171;UBERON:0011216,4.57e-29,223;UBERON:0002420,1.66e-26,9;UBERON:0007245,1.66e-26,9;UBERON:0010009,1.66e-26,9;UBERON:0010011,1.66e-26,9;UBERON:0000454,1.66e-26,9;UBERON:0000125,3.31e-25,9;UBERON:0002308,3.31e-25,9;UBERON:0000025,8.76e-22,192;UBERON:0009663,2.06e-20,7;UBERON:0000200,2.16e-19,6;UBERON:0003076,6.04e-17,15;UBERON:0003057,6.04e-17,15;UBERON:0000349,1.84e-16,5;UBERON:0002298,4.45e-16,6;UBERON:0004732,7.31e-16,13;UBERON:0001872,1.72e-15,5;UBERON:0004111,3.65e-15,240;UBERON:0002021,4.90e-15,5;UBERON:0004733,9.58e-14,12;UBERON:0002028,9.58e-14,12;UBERON:0007277,9.58e-14,12;UBERON:0000369,5.93e-13,4;UBERON:0002435,5.93e-13,4;UBERON:0000204,5.93e-13,4;UBERON:0010082,5.93e-13,4;UBERON:0000483,1.98e-12,306;UBERON:0000119,3.41e-12,309;UBERON:0001871,1.02e-11,6;UBERON:0001870,1.13e-10,3;UBERON:0005383,4.42e-10,3;UBERON:0005382,4.42e-10,3;UBERON:0001896,5.14e-09,3;UBERON:0005290,5.14e-09,3;UBERON:0010096,5.14e-09,3;UBERON:0000988,9.32e-09,3;UBERON:0001876,8.11e-08,2;UBERON:0002702,8.37e-08,2;UBERON:0002680,1.24e-07,9;UBERON:0001895,1.24e-07,9;UBERON:0010092,1.24e-07,9;UBERON:0002771,1.31e-07,2;UBERON:0001954,1.85e-07,2;UBERON:0003022,1.85e-07,2;UBERON:0002421,1.85e-07,2;UBERON:0002600,1.85e-07,2;UBERON:0001873,2.03e-07,2;UBERON:0010122,2.03e-07,2;UBERON:0002784,5.09e-07,4;UBERON:0001897,5.59e-07,2;UBERON:0010225,5.59e-07,2;UBERON:0001894,6.34e-07,7;UBERON:0006222,6.34e-07,7;UBERON:0001875,9.27e-07,2;UBERON:0006514,9.27e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.273748850145768,0.627713197974014,0.61130724598361,0.328402357799783,0.472264687882075,0,0,0,0,0,0,1.23947520928483,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0.546138611262131,0,1.70692089026603,0.400395987036012,0.574752439954483,1.98313461835459,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.851363990735132,0,0,0,0,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43453850447661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,0,0,1.17261385734044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95903353436409,7.87748731898871,0,0,0,0,0,1.0077309914171,0,0.615424027305347,0,0,0,0,0,0,0,6.78532922266653,3.6179558283122,7.98455192004777,0,0,1.44999915086959,0,0,0,0,0,0,3.54296554325536,5.06505042226713,0,3.20679853800551,1.77328571372128,3.07139556015562,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0,0,0,2.42644078730437,0,4.45102446878144,4.56136973039165,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,1.35588444468319,0,0,4.43175571691151,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.104602846312333,0,0,1.80126086612937,2.32739144116388,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0.423366660328922,3.18091875923721,7.49118733613666,0.160753148465019,0.137539436597234,0.83088067605837,0,0,5.95345655248642,0,0.157611414598396,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,1.0342636508924,1.98348902614035,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,3.16660755790329,0,0,0,0,0,0,7.97461361970287,5.36915565568638,6.50992839673799,1.72022758707021,1.66393577305278,1.61450647647597,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11556213761404,0,0,0,0,0,0,0,0.106691729694141,0.688859918643263,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,1.02520268501629,2.40171224485641,0,0,4.43181653165571,1.41696576325585,3.51194489925733,3.28186182785208,2.7727886584389,3.8728061379962,5.65164759711479,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,0,3.37687923091973,3.12431239445539,6.40729069153671,4.6293541441552,1.09394961803644,0,0.496211178389294,0,0,0,1.00885116665647,0,0.227662191351298,0,1.72850981333669,0,1.01954599465248,4.66986692296229,0.118193840883968,0,0,2.98519620840404,0,0,0,0,2.287249413653,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,1.37415926980462,0.594092800654172,3.8039015482506,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,1.57673541466596,0,4.35145537221854,3.49080552272302,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,2.48750831837634,3.10298987585686,0,0.23806443146374,0,0,0,0.891060215894309,0.808468755832877,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,0.733448665097199,0,0,0.402547587182052,0 | |||
|short_description=p11@GPM6A | |||
}} |
Revision as of 04:06, 22 January 2014
Short description: | p11@GPM6A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GPM6A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 44bp_to_NM_005277, NM_201592, uc003iug.2, uc003iuh.2_5end |
EntrezGene: | GPM6A |
HGNC: | 4460 |
UniProt: | P51674E9PHI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature B cell | 4.81e-07 | 2 |
pre-B-II cell | 4.81e-07 | 2 |
transitional stage B cell | 4.81e-07 | 2 |
small pre-B-II cell | 4.81e-07 | 2 |
immature B cell | 4.81e-07 | 2 |