FFCP PHASE1:Mm9::chr11:52113309..52113321,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=476|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:52113309..52113321,+|id=chr11:52113309..52113321,+|ontology_enrichment_celltype=CL:0000084!1.21e-18!11;CL:0000827!1.21e-18!11;CL:0000838!6.61e-17!12;CL:0000542!1.94e-15!13;CL:0000051!1.94e-15!13;CL:0000791!2.14e-15!9;CL:0000789!2.14e-15!9;CL:0002420!2.14e-15!9;CL:0002419!2.14e-15!9;CL:0000790!2.14e-15!9;CL:0002031!4.84e-14!25;CL:0000624!2.83e-13!8;CL:0000738!2.68e-11!17;CL:0002087!2.68e-11!17;CL:0000988!2.99e-10!32;CL:0002032!2.99e-10!32;CL:0000037!2.99e-10!32;CL:0000566!2.99e-10!32;CL:0000837!2.99e-10!32;CL:0000893!2.48e-09!6;CL:0002489!2.48e-09!6;CL:0000898!2.48e-09!6;CL:0000809!2.48e-09!6;CL:0000810!2.48e-09!6;CL:0000895!2.48e-09!6;CL:0000808!2.48e-09!6;CL:0000894!2.48e-09!6;CL:0000806!2.48e-09!6;CL:0000807!2.48e-09!6;CL:0000805!2.48e-09!6;CL:0002425!2.48e-09!6;CL:0002436!2.48e-09!6;CL:0002427!2.48e-09!6;CL:0002428!2.48e-09!6;CL:0002429!2.48e-09!6;CL:0002433!2.48e-09!6;CL:0002431!2.48e-09!6;CL:0002432!2.48e-09!6|ontology_enrichment_celltype_v019_2=CL:0000791,1.57e-15,9;CL:0000789,1.57e-15,9;CL:0002420,1.57e-15,9;CL:0002419,1.57e-15,9;CL:0000790,1.57e-15,9;CL:0000084,1.07e-12,11;CL:0000827,1.07e-12,11;CL:0000838,1.25e-11,12;CL:0000624,1.96e-11,8;CL:0000542,9.95e-11,13;CL:0000051,9.95e-11,13;CL:0000738,3.56e-08,17;CL:0002087,3.56e-08,17;CL:0000625,5.34e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!6.20e-33!29;UBERON:0002370!8.43e-32!23;UBERON:0000974!8.43e-32!23;UBERON:0004807!8.43e-32!23;UBERON:0005058!8.43e-32!23;UBERON:0003351!8.43e-32!23;UBERON:0009113!8.43e-32!23;UBERON:0003295!8.43e-32!23;UBERON:0009722!8.43e-32!23;UBERON:0005562!8.43e-32!23;UBERON:0007690!8.43e-32!23;UBERON:0006562!2.88e-30!24;UBERON:0003408!2.88e-30!24;UBERON:0001557!2.88e-30!24;UBERON:0001042!2.88e-30!24;UBERON:0008814!2.88e-30!24;UBERON:0009145!2.88e-30!24;UBERON:0000065!3.57e-28!41;UBERON:0002193!4.56e-28!48;UBERON:0002390!1.12e-27!45;UBERON:0003061!1.12e-27!45;UBERON:0001004!2.37e-27!42;UBERON:0000072!2.39e-26!27;UBERON:0000063!3.42e-19!35;UBERON:0002405!4.03e-17!70;UBERON:0005057!2.82e-16!51;UBERON:0005911!3.41e-14!69;UBERON:0003081!2.38e-13!88;UBERON:0001041!2.71e-12!92;UBERON:0000077!2.59e-11!97;UBERON:0003929!1.82e-10!55;UBERON:0002368!2.65e-10!60;UBERON:0002530!3.89e-09!65;UBERON:0000490!5.89e-08!66;UBERON:0000949!8.72e-08!72;UBERON:0003104!2.30e-07!131;UBERON:0009142!2.30e-07!131;UBERON:0004921!3.41e-07!126;UBERON:0004185!3.41e-07!126;UBERON:0001007!5.57e-07!128;UBERON:0001555!5.57e-07!128;UBERON:0007026!5.57e-07!128;UBERON:0004119!8.95e-07!130;UBERON:0000925!8.95e-07!130;UBERON:0006595!8.95e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-33,23;UBERON:0000974,4.00e-33,23;UBERON:0004807,4.00e-33,23;UBERON:0005058,4.00e-33,23;UBERON:0003351,4.00e-33,23;UBERON:0009113,4.00e-33,23;UBERON:0003295,4.00e-33,23;UBERON:0009722,4.00e-33,23;UBERON:0005562,4.00e-33,23;UBERON:0007690,4.00e-33,23;UBERON:0006562,1.10e-31,24;UBERON:0003408,1.10e-31,24;UBERON:0001557,1.10e-31,24;UBERON:0001042,1.10e-31,24;UBERON:0008814,1.10e-31,24;UBERON:0009145,1.10e-31,24;UBERON:0000072,5.23e-28,27;UBERON:0004177,5.60e-26,29;UBERON:0005057,5.60e-26,29;UBERON:0000077,2.84e-21,35;UBERON:0007811,1.22e-20,36;UBERON:0002193,5.39e-18,48;UBERON:0002405,5.39e-18,48;UBERON:0000065,6.11e-18,41;UBERON:0001004,1.78e-17,42;UBERON:0000153,4.91e-17,43;UBERON:0002390,3.29e-16,45;UBERON:0003061,3.29e-16,45;UBERON:0003929,5.61e-13,55;UBERON:0002368,9.20e-12,60;UBERON:0002530,9.84e-11,65;UBERON:0000490,1.52e-10,66;UBERON:0005911,5.13e-10,69;UBERON:0000949,1.57e-09,72;UBERON:0001041,2.07e-08,80;UBERON:0003081,1.35e-07,87;UBERON:0000029,2.75e-07,1;UBERON:0001097,2.75e-07,1;UBERON:0003968,2.75e-07,1;UBERON:0001467,2.75e-07,1|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0.70219357896598,0,0.159544317990673,4.45121897821135,2.36035086531293,0.333109761815663,0.202475267389826,0,0.630924330716475,0.274228867211478,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.50919862576798,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.202725215290164,0.410843828659309,0.129920822977795,0.716106782669926,1.39076948346885,1.68273629327956,1.77227432609493,1.51449674922221,1.752756553065,1.91569751759997,2.24153125701431,2.30908419936791,3.03879945672079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:52113309..52113321,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=476 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:52113309..52113321,+ | |||
|description=CAGE_peak_at_chr11:52113309..52113321,+ | |||
|id=chr11:52113309..52113321,+ | |||
|ontology_enrichment_celltype=CL:0000084!1.21e-18!11;CL:0000827!1.21e-18!11;CL:0000838!6.61e-17!12;CL:0000542!1.94e-15!13;CL:0000051!1.94e-15!13;CL:0000791!2.14e-15!9;CL:0000789!2.14e-15!9;CL:0002420!2.14e-15!9;CL:0002419!2.14e-15!9;CL:0000790!2.14e-15!9;CL:0002031!4.84e-14!25;CL:0000624!2.83e-13!8;CL:0000738!2.68e-11!17;CL:0002087!2.68e-11!17;CL:0000988!2.99e-10!32;CL:0002032!2.99e-10!32;CL:0000037!2.99e-10!32;CL:0000566!2.99e-10!32;CL:0000837!2.99e-10!32;CL:0000893!2.48e-09!6;CL:0002489!2.48e-09!6;CL:0000898!2.48e-09!6;CL:0000809!2.48e-09!6;CL:0000810!2.48e-09!6;CL:0000895!2.48e-09!6;CL:0000808!2.48e-09!6;CL:0000894!2.48e-09!6;CL:0000806!2.48e-09!6;CL:0000807!2.48e-09!6;CL:0000805!2.48e-09!6;CL:0002425!2.48e-09!6;CL:0002436!2.48e-09!6;CL:0002427!2.48e-09!6;CL:0002428!2.48e-09!6;CL:0002429!2.48e-09!6;CL:0002433!2.48e-09!6;CL:0002431!2.48e-09!6;CL:0002432!2.48e-09!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.57e-15,9;CL:0000789,1.57e-15,9;CL:0002420,1.57e-15,9;CL:0002419,1.57e-15,9;CL:0000790,1.57e-15,9;CL:0000084,1.07e-12,11;CL:0000827,1.07e-12,11;CL:0000838,1.25e-11,12;CL:0000624,1.96e-11,8;CL:0000542,9.95e-11,13;CL:0000051,9.95e-11,13;CL:0000738,3.56e-08,17;CL:0002087,3.56e-08,17;CL:0000625,5.34e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!6.20e-33!29;UBERON:0002370!8.43e-32!23;UBERON:0000974!8.43e-32!23;UBERON:0004807!8.43e-32!23;UBERON:0005058!8.43e-32!23;UBERON:0003351!8.43e-32!23;UBERON:0009113!8.43e-32!23;UBERON:0003295!8.43e-32!23;UBERON:0009722!8.43e-32!23;UBERON:0005562!8.43e-32!23;UBERON:0007690!8.43e-32!23;UBERON:0006562!2.88e-30!24;UBERON:0003408!2.88e-30!24;UBERON:0001557!2.88e-30!24;UBERON:0001042!2.88e-30!24;UBERON:0008814!2.88e-30!24;UBERON:0009145!2.88e-30!24;UBERON:0000065!3.57e-28!41;UBERON:0002193!4.56e-28!48;UBERON:0002390!1.12e-27!45;UBERON:0003061!1.12e-27!45;UBERON:0001004!2.37e-27!42;UBERON:0000072!2.39e-26!27;UBERON:0000063!3.42e-19!35;UBERON:0002405!4.03e-17!70;UBERON:0005057!2.82e-16!51;UBERON:0005911!3.41e-14!69;UBERON:0003081!2.38e-13!88;UBERON:0001041!2.71e-12!92;UBERON:0000077!2.59e-11!97;UBERON:0003929!1.82e-10!55;UBERON:0002368!2.65e-10!60;UBERON:0002530!3.89e-09!65;UBERON:0000490!5.89e-08!66;UBERON:0000949!8.72e-08!72;UBERON:0003104!2.30e-07!131;UBERON:0009142!2.30e-07!131;UBERON:0004921!3.41e-07!126;UBERON:0004185!3.41e-07!126;UBERON:0001007!5.57e-07!128;UBERON:0001555!5.57e-07!128;UBERON:0007026!5.57e-07!128;UBERON:0004119!8.95e-07!130;UBERON:0000925!8.95e-07!130;UBERON:0006595!8.95e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-33,23;UBERON:0000974,4.00e-33,23;UBERON:0004807,4.00e-33,23;UBERON:0005058,4.00e-33,23;UBERON:0003351,4.00e-33,23;UBERON:0009113,4.00e-33,23;UBERON:0003295,4.00e-33,23;UBERON:0009722,4.00e-33,23;UBERON:0005562,4.00e-33,23;UBERON:0007690,4.00e-33,23;UBERON:0006562,1.10e-31,24;UBERON:0003408,1.10e-31,24;UBERON:0001557,1.10e-31,24;UBERON:0001042,1.10e-31,24;UBERON:0008814,1.10e-31,24;UBERON:0009145,1.10e-31,24;UBERON:0000072,5.23e-28,27;UBERON:0004177,5.60e-26,29;UBERON:0005057,5.60e-26,29;UBERON:0000077,2.84e-21,35;UBERON:0007811,1.22e-20,36;UBERON:0002193,5.39e-18,48;UBERON:0002405,5.39e-18,48;UBERON:0000065,6.11e-18,41;UBERON:0001004,1.78e-17,42;UBERON:0000153,4.91e-17,43;UBERON:0002390,3.29e-16,45;UBERON:0003061,3.29e-16,45;UBERON:0003929,5.61e-13,55;UBERON:0002368,9.20e-12,60;UBERON:0002530,9.84e-11,65;UBERON:0000490,1.52e-10,66;UBERON:0005911,5.13e-10,69;UBERON:0000949,1.57e-09,72;UBERON:0001041,2.07e-08,80;UBERON:0003081,1.35e-07,87;UBERON:0000029,2.75e-07,1;UBERON:0001097,2.75e-07,1;UBERON:0003968,2.75e-07,1;UBERON:0001467,2.75e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.422366166455,0.70219357896598,0,0.159544317990673,4.45121897821135,2.36035086531293,0.333109761815663,0.202475267389826,0,0.630924330716475,0.274228867211478,0,0,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17608642603403,2.35265659399725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,7.50919862576798,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512612642393558,0,0,0,0.546776910884101,0.228778173206523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52808896502543,0.202725215290164,0.410843828659309,0.129920822977795,0.716106782669926,1.39076948346885,1.68273629327956,1.77227432609493,1.51449674922221,1.752756553065,1.91569751759997,2.24153125701431,2.30908419936791,3.03879945672079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:52113309..52113321,+ | |||
}} |
Latest revision as of 01:17, 6 August 2015
Short description: | p@chr11:52113309..52113321, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:52113309..52113321, + |
Coexpression cluster: | MCL_coexpression_mm9:476 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.57e-15 | 9 |
alpha-beta T cell | 1.57e-15 | 9 |
immature T cell | 1.57e-15 | 9 |
mature T cell | 1.57e-15 | 9 |
immature alpha-beta T cell | 1.57e-15 | 9 |
T cell | 1.07e-12 | 11 |
pro-T cell | 1.07e-12 | 11 |
lymphoid lineage restricted progenitor cell | 1.25e-11 | 12 |
CD4-positive, alpha-beta T cell | 1.96e-11 | 8 |
lymphocyte | 9.95e-11 | 13 |
common lymphoid progenitor | 9.95e-11 | 13 |
leukocyte | 3.56e-08 | 17 |
nongranular leukocyte | 3.56e-08 | 17 |
CD8-positive, alpha-beta T cell | 5.34e-07 | 1 |