FFCP PHASE1:Hg19::chr1:207109152..207109165,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C435 | |||
|description=CAGE_peak_at_chr1:207109152..207109165,- | |||
|id=chr1:207109152..207109165,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.88e-21;1!UBERON:0006298;2.82e-21;1!UBERON:0001045;6.31e-21;1!UBERON:0006242;6.31e-21;1!UBERON:0006595;3.45e-10;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.89e-18!2;UBERON:0003127!1.13e-17!2;UBERON:0000078!1.97e-16!18;UBERON:0004921!1.16e-15!129;UBERON:0004185!1.16e-15!129;UBERON:0001007!2.61e-14!155;UBERON:0001555!2.61e-14!155;UBERON:0007026!2.61e-14!155;UBERON:0000166!5.06e-14!21;UBERON:0001044!1.18e-13!6;UBERON:0003293!1.18e-13!6;UBERON:0003294!1.18e-13!6;UBERON:0010047!1.18e-13!6;UBERON:0000167!1.18e-13!6;UBERON:0004119!7.17e-13!169;UBERON:0000925!7.17e-13!169;UBERON:0006595!7.17e-13!169;UBERON:0006562!3.82e-12!11;UBERON:0007023!6.03e-12!115;UBERON:0001723!6.23e-12!3;UBERON:0001033!6.23e-12!3;UBERON:0010056!6.23e-12!3;UBERON:0000160!1.76e-10!27;UBERON:0000165!2.12e-10!28;UBERON:0000930!2.12e-10!28;UBERON:0001831!4.09e-10!1;UBERON:0001567!4.09e-10!1;UBERON:0008801!4.09e-10!1;UBERON:0001736!4.46e-10!1;UBERON:0006298!4.46e-10!1;UBERON:0001154!6.31e-10!1;UBERON:0001153!6.31e-10!1;UBERON:0002372!1.76e-09!1;UBERON:0001961!1.76e-09!1;UBERON:0001744!1.76e-09!1;UBERON:0001735!1.76e-09!1;UBERON:0001155!3.66e-09!9;UBERON:0003408!2.17e-08!10;UBERON:0000161!3.19e-08!35;UBERON:0001004!3.96e-08!72;UBERON:0005409!4.84e-08!35;UBERON:0001042!6.22e-08!10;UBERON:0009145!6.22e-08!10;UBERON:0000059!1.40e-07!11;UBERON:0000077!3.15e-07!130;UBERON:0001041!5.97e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.33e-41;2!UBERON:0004921;1.41e-31;33!UBERON:0001044;1.38e-30;6!UBERON:0003293;1.38e-30;6!UBERON:0003294;1.38e-30;6!UBERON:0010047;1.38e-30;6!UBERON:0003408;1.38e-30;6!UBERON:0000167;1.38e-30;6!UBERON:0000160;1.44e-27;17!UBERON:0005409;1.23e-21;22!UBERON:0001831;1.88e-21;1!UBERON:0001567;1.88e-21;1!UBERON:0001736;2.82e-21;1!UBERON:0001154;6.31e-21;1!UBERON:0001153;6.31e-21;1!UBERON:0009854;6.31e-21;1!UBERON:0001155;2.26e-20;9!UBERON:0002108;6.40e-17;4!UBERON:0000059;8.34e-17;11!UBERON:0001555;1.70e-15;54!UBERON:0001041;1.54e-13;14!UBERON:0004089;2.02e-11;2!UBERON:0003127;3.70e-11;2!UBERON:0001007;1.87e-10;81!UBERON:0000161;3.80e-10;19!UBERON:0000166;3.80e-10;19!UBERON:0002110;7.26e-08;3!UBERON:0002114;7.26e-08;2!UBERON:0000165;4.53e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.99e-41,2;UBERON:0001044,1.25e-30,6;UBERON:0003293,1.25e-30,6;UBERON:0003294,1.25e-30,6;UBERON:0010047,1.25e-30,6;UBERON:0000167,1.25e-30,6;UBERON:0000160,1.44e-27,17;UBERON:0001831,1.88e-21,1;UBERON:0001567,1.88e-21,1;UBERON:0008801,1.88e-21,1;UBERON:0001736,2.30e-21,1;UBERON:0006298,2.30e-21,1;UBERON:0001154,5.16e-21,1;UBERON:0001153,5.16e-21,1;UBERON:0001045,5.16e-21,1;UBERON:0001155,1.98e-20,9;UBERON:0005409,3.61e-19,25;UBERON:0003408,1.07e-18,10;UBERON:0000059,7.48e-17,11;UBERON:0002108,7.51e-17,4;UBERON:0007023,1.03e-13,114;UBERON:0001007,3.78e-13,145;UBERON:0001555,3.78e-13,145;UBERON:0007026,3.78e-13,145;UBERON:0004921,4.10e-13,118;UBERON:0004119,7.01e-12,160;UBERON:0000925,7.01e-12,160;UBERON:0006595,7.01e-12,160;UBERON:0004089,2.02e-11,2;UBERON:0003127,3.70e-11,2;UBERON:0000166,7.41e-09,22;UBERON:0002110,7.76e-08,3;UBERON:0006242,7.76e-08,3;UBERON:0002114,8.29e-08,2;UBERON:0000165,7.47e-07,29;UBERON:0000930,7.47e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93398740871803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.0345239835768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,1.49417096317547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83780436800028,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58136415292167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17066859323229,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75237570042724,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0.217716747896961,0.684466602170562,0.26940821205835,1.57788851863888,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:207109152..207109165,- | |||
}} |
Revision as of 23:50, 10 January 2014
Short description: | p@chr1:207109152..207109165, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:207109152..207109165, - |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.99e-41 | 2 |
saliva-secreting gland | 1.25e-30 | 6 |
gland of oral region | 1.25e-30 | 6 |
gland of foregut | 1.25e-30 | 6 |
oral gland | 1.25e-30 | 6 |
oral cavity | 1.25e-30 | 6 |
intestine | 1.44e-27 | 17 |
parotid gland | 1.88e-21 | 1 |
cheek | 1.88e-21 | 1 |
parotid gland primordium | 1.88e-21 | 1 |
submandibular gland | 2.30e-21 | 1 |
submandibular gland primordium | 2.30e-21 | 1 |
vermiform appendix | 5.16e-21 | 1 |
caecum | 5.16e-21 | 1 |
midgut | 5.16e-21 | 1 |
colon | 1.98e-20 | 9 |
gastrointestinal system | 3.61e-19 | 25 |
gland of gut | 1.07e-18 | 10 |
large intestine | 7.48e-17 | 11 |
small intestine | 7.51e-17 | 4 |
adult organism | 1.03e-13 | 114 |
digestive system | 3.78e-13 | 145 |
digestive tract | 3.78e-13 | 145 |
primitive gut | 3.78e-13 | 145 |
subdivision of digestive tract | 4.10e-13 | 118 |
endoderm-derived structure | 7.01e-12 | 160 |
endoderm | 7.01e-12 | 160 |
presumptive endoderm | 7.01e-12 | 160 |
midface | 2.02e-11 | 2 |
open tracheal system trachea | 3.70e-11 | 2 |
oral opening | 7.41e-09 | 22 |
gallbladder | 7.76e-08 | 3 |
gall bladder primordium | 7.76e-08 | 3 |
duodenum | 8.29e-08 | 2 |
mouth | 7.47e-07 | 29 |
stomodeum | 7.47e-07 | 29 |