FFCP PHASE1:Hg19::chr19:39182748..39182750,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_at_chr19:39182748..39182750,+ | |||
|id=chr19:39182748..39182750,+ | |||
|ontology_enrichment_celltype=CL:1000507!2.46e-07!12;CL:1000494!2.46e-07!12;CL:1000449!9.12e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000319;2.66e-18;1!CL:1000449;5.18e-18;15!CL:1000497;6.13e-16;17!CL:0002518;6.13e-16;17!CL:1000507;1.35e-15;10!CL:1000494;1.35e-15;10!CL:0000349;3.22e-14;19!CL:1000746;2.13e-10;7!CL:1000612;2.13e-10;7!CL:0000159;7.97e-10;2!CL:0000650;1.38e-09;2!CL:1000500;1.38e-09;2!CL:1000618;1.38e-09;2!CL:1001318;1.38e-09;2!CL:0002173;1.38e-09;2!CL:0002541;8.38e-07;3!CL:0002166;8.38e-07;3!CL:0002577;8.38e-07;3!CL:0002586;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,2.66e-18,1;CL:1000449,7.54e-18,15;CL:1000497,8.52e-16,17;CL:0002518,8.52e-16,17;CL:1000507,1.83e-15,10;CL:1000494,1.83e-15,10;CL:0000349,2.45e-14,19;CL:1000746,2.97e-10,7;CL:1000612,2.97e-10,7;CL:0000159,7.98e-10,2;CL:0000650,2.02e-09,2;CL:1000500,2.02e-09,2;CL:1000618,2.02e-09,2;CL:1001318,2.02e-09,2;CL:0002173,2.02e-09,2;CL:0002166,6.50e-07,3;CL:0002577,7.28e-07,3;CL:0002541,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;2.66e-18;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,2.66e-18,1 | |||
|ontology_enrichment_uberon=UBERON:0004923!9.39e-08!57;UBERON:0009773!2.46e-07!12;UBERON:0001231!2.46e-07!12;UBERON:0004810!2.46e-07!12;UBERON:0005631!3.23e-07!14;UBERON:0000158!3.23e-07!14;UBERON:0007625!7.15e-07!11;UBERON:0000478!8.37e-07!24;UBERON:0004211!9.12e-07!16;UBERON:0001285!9.12e-07!16;UBERON:0007684!9.12e-07!16;UBERON:0003220!9.12e-07!16;UBERON:0004208!9.12e-07!16 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.18e-18;15!UBERON:0004819;5.18e-18;15!UBERON:0001285;5.18e-18;15!UBERON:0007684;5.18e-18;15!UBERON:0004211;1.35e-15;10!UBERON:0009773;1.35e-15;10!UBERON:0001231;1.35e-15;10!UBERON:0004810;1.35e-15;10!UBERON:0002113;2.16e-11;24!UBERON:0011143;2.16e-11;24!UBERON:0000478;2.51e-11;24!UBERON:0000074;2.13e-10;7!UBERON:0001229;2.13e-10;7!UBERON:0003567;1.38e-09;2!UBERON:0003838;1.38e-09;2!UBERON:0003586;1.38e-09;2!UBERON:0005169;1.38e-09;2!UBERON:0002321;1.38e-09;2!UBERON:0005215;1.38e-09;2!UBERON:0002303;1.38e-09;2!UBERON:0002319;1.38e-09;2!UBERON:0000489;1.77e-09;29!UBERON:0006554;3.59e-09;30!UBERON:0001008;3.59e-09;30!UBERON:0005631;1.52e-07;10!UBERON:0000158;1.52e-07;10!UBERON:0001781;8.38e-07;3!UBERON:0003124;8.38e-07;3!UBERON:0001782;8.38e-07;3!UBERON:0000920;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,7.54e-18,15;UBERON:0009773,7.54e-18,15;UBERON:0001231,7.54e-18,15;UBERON:0001285,7.54e-18,15;UBERON:0007684,7.54e-18,15;UBERON:0004208,7.54e-18,15;UBERON:0006555,9.29e-17,16;UBERON:0004819,9.29e-17,16;UBERON:0004810,1.83e-15,10;UBERON:0000478,2.02e-11,24;UBERON:0005631,2.36e-11,14;UBERON:0000158,2.36e-11,14;UBERON:0003124,1.77e-10,7;UBERON:0002113,1.91e-10,26;UBERON:0003918,1.91e-10,26;UBERON:0011143,1.91e-10,26;UBERON:0005095,1.91e-10,26;UBERON:0007687,1.91e-10,26;UBERON:0010532,2.97e-10,7;UBERON:0000074,2.97e-10,7;UBERON:0001229,2.97e-10,7;UBERON:0001230,2.97e-10,7;UBERON:0003220,2.97e-10,7;UBERON:0005749,2.97e-10,7;UBERON:0004199,2.97e-10,7;UBERON:0004209,2.97e-10,7;UBERON:0004198,2.97e-10,7;UBERON:0003567,2.02e-09,2;UBERON:0003838,2.02e-09,2;UBERON:0003586,2.02e-09,2;UBERON:0005169,2.02e-09,2;UBERON:0002321,2.02e-09,2;UBERON:0005215,2.02e-09,2;UBERON:0002303,2.02e-09,2;UBERON:0002319,2.02e-09,2;UBERON:0005103,4.36e-09,8;UBERON:0000083,4.36e-09,8;UBERON:0009201,4.36e-09,8;UBERON:0006553,4.36e-09,8;UBERON:0003074,4.36e-09,8;UBERON:0003060,4.36e-09,8;UBERON:0006554,8.05e-09,47;UBERON:0000489,8.30e-09,31;UBERON:0001008,1.23e-08,48;UBERON:0000080,3.55e-08,9;UBERON:0002120,3.55e-08,9;UBERON:0004875,3.55e-08,9;UBERON:0005721,3.55e-08,9;UBERON:0005754,3.55e-08,9;UBERON:0007297,3.55e-08,9;UBERON:0004876,7.59e-07,11;UBERON:0000920,7.70e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0.573673241497627,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.600182192168805,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.710019185033229,0.10075209822764,0.339121184620975,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,1.87467667973554,0,0.283550194484773,0.179117045405697,0.871901815541886,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0.514414748524284,0,0.266422179016099,0,0,0,0,0,1.58390374586686,0.602878754119172,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.391602314925481,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0,0,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0,0.40101294060657,0,0,0,0,0,0.539107359730903,3.13739907670742,1.46139224653261,0,0,0,0,0,0,1.00337954770971,0.764628819135115,0.831076008928724,0.447749509444357,0,0,1.02580050046556,0.328014645699706,0.650756789328606,0,0,0.165018999841176,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.37064843820784,0.143124886741991,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0,0.430234056612155,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0.47748896947538,1.78178808499583,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,1.5950057986596,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0.471388069233591,0.271808412147228,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.157363764404994,0.105600336519406,0,0.383830394638891,0,0,0,0,0,0.979762080328227,0,0,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0,0,0,0,0,0,0,9.33937053264133,0.422624246717254,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0.533636729388577,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:39182748..39182750,+ | |||
}} |
Revision as of 23:08, 20 January 2014
Short description: | p@chr19:39182748..39182750, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:39182748..39182750, + |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 2.66e-18 | 1 |
epithelial cell of nephron | 7.54e-18 | 15 |
kidney cell | 8.52e-16 | 17 |
kidney epithelial cell | 8.52e-16 | 17 |
kidney tubule cell | 1.83e-15 | 10 |
nephron tubule epithelial cell | 1.83e-15 | 10 |
extraembryonic cell | 2.45e-14 | 19 |
glomerular cell | 2.97e-10 | 7 |
kidney corpuscule cell | 2.97e-10 | 7 |
seromucus secreting cell | 7.98e-10 | 2 |
mesangial cell | 2.02e-09 | 2 |
kidney interstitial cell | 2.02e-09 | 2 |
juxtaglomerular complex cell | 2.02e-09 | 2 |
renal interstitial pericyte | 2.02e-09 | 2 |
extraglomerular mesangial cell | 2.02e-09 | 2 |
epithelial cell of Malassez | 6.50e-07 | 3 |
placental epithelial cell | 7.28e-07 | 3 |
chorionic membrane mesenchymal stem cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 2.66e-18 | 1 |