FFCP PHASE1:Hg19::chr15:42697040..42697052,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |||
|association_with_transcript=63bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_4_at_CAPN3_5end | |||
|id=chr15:42697040..42697052,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.72e-14!10;CL:0000541!2.72e-14!10;CL:0000147!4.19e-12!14;CL:0002567!2.41e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.59e-15;10!CL:0000147;1.22e-13;14!CL:0002567;5.91e-11;3!CL:0000710;3.58e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.62e-15,10;CL:0000541,1.62e-15,10;CL:0000147,1.22e-13,14;CL:0002567,6.01e-11,3;CL:0000710,3.62e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.71e-21;82!UBERON:0006215;5.23e-09;3!UBERON:0010122;9.58e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.45e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.56e-71!57;UBERON:0005068!4.56e-71!57;UBERON:0006241!4.56e-71!57;UBERON:0007135!4.56e-71!57;UBERON:0002616!1.40e-58!59;UBERON:0005743!9.44e-58!86;UBERON:0001017!3.09e-56!82;UBERON:0007023!5.77e-56!115;UBERON:0000073!2.10e-53!94;UBERON:0001016!2.10e-53!94;UBERON:0002780!2.75e-53!41;UBERON:0001890!2.75e-53!41;UBERON:0006240!2.75e-53!41;UBERON:0000955!9.60e-53!69;UBERON:0006238!9.60e-53!69;UBERON:0003080!8.58e-52!42;UBERON:0003075!3.04e-51!86;UBERON:0007284!3.04e-51!86;UBERON:0002346!2.51e-48!90;UBERON:0001893!9.04e-47!34;UBERON:0002020!9.37e-47!34;UBERON:0003528!9.37e-47!34;UBERON:0002791!8.35e-45!33;UBERON:0001869!1.65e-42!32;UBERON:0003056!4.98e-37!61;UBERON:0002619!7.39e-34!22;UBERON:0000033!1.42e-32!123;UBERON:0004121!8.83e-32!169;UBERON:0000924!1.13e-30!173;UBERON:0006601!1.13e-30!173;UBERON:0000153!2.12e-30!129;UBERON:0007811!2.12e-30!129;UBERON:0001950!3.87e-30!20;UBERON:0000956!3.04e-29!25;UBERON:0000203!3.04e-29!25;UBERON:0002308!1.05e-19!9;UBERON:0000125!1.05e-19!9;UBERON:0003076!1.71e-19!15;UBERON:0003057!1.71e-19!15;UBERON:0002420!3.39e-19!9;UBERON:0007245!3.39e-19!9;UBERON:0010009!3.39e-19!9;UBERON:0010011!3.39e-19!9;UBERON:0000454!3.39e-19!9;UBERON:0000025!2.11e-17!194;UBERON:0004732!5.18e-16!13;UBERON:0009663!1.49e-15!7;UBERON:0002298!4.32e-14!8;UBERON:0004733!5.38e-14!12;UBERON:0002028!5.38e-14!12;UBERON:0007277!5.38e-14!12;UBERON:0004111!2.34e-13!241;UBERON:0000200!5.18e-13!6;UBERON:0000483!1.20e-12!309;UBERON:0001871!1.46e-12!7;UBERON:0000119!2.27e-12!312;UBERON:0000349!5.17e-11!5;UBERON:0000477!1.03e-09!286;UBERON:0000475!1.74e-09!365;UBERON:0000064!3.21e-09!219;UBERON:0000369!4.22e-09!4;UBERON:0002435!4.22e-09!4;UBERON:0000204!4.22e-09!4;UBERON:0010082!4.22e-09!4;UBERON:0002680!1.58e-08!9;UBERON:0001895!1.58e-08!9;UBERON:0010092!1.58e-08!9;UBERON:0006331!5.16e-08!3;UBERON:0000988!5.40e-08!3;UBERON:0001894!6.37e-08!7;UBERON:0006222!6.37e-08!7;UBERON:0001896!8.29e-08!3;UBERON:0005290!8.29e-08!3;UBERON:0010096!8.29e-08!3;UBERON:0001872!9.66e-08!5;UBERON:0002021!1.59e-07!5;UBERON:0002240!1.72e-07!3;UBERON:0002771!3.29e-07!3;UBERON:0005383!3.82e-07!3;UBERON:0005382!3.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.21e-55;34!UBERON:0003528;1.26e-54;34!UBERON:0002020;1.26e-54;34!UBERON:0002791;1.99e-53;32!UBERON:0001869;3.14e-53;32!UBERON:0002780;1.07e-49;41!UBERON:0001890;1.07e-49;41!UBERON:0000073;1.59e-47;53!UBERON:0002616;1.59e-47;53!UBERON:0002619;8.57e-47;22!UBERON:0001950;1.23e-41;20!UBERON:0000956;9.16e-41;25!UBERON:0000203;9.16e-41;25!UBERON:0000955;1.55e-30;68!UBERON:0001017;3.84e-30;75!UBERON:0000125;1.01e-26;9!UBERON:0002308;1.01e-26;9!UBERON:0002420;5.09e-26;9!UBERON:0007245;5.09e-26;9!UBERON:0010009;5.09e-26;9!UBERON:0010011;5.09e-26;9!UBERON:0000454;5.09e-26;9!UBERON:0001016;3.52e-24;83!UBERON:0004732;5.23e-22;13!UBERON:0009663;5.70e-21;7!UBERON:0004733;3.33e-19;12!UBERON:0002028;3.33e-19;12!UBERON:0002298;6.06e-19;6!UBERON:0000200;2.40e-17;6!UBERON:0007023;4.78e-17;114!UBERON:0000349;1.25e-14;5!UBERON:0001871;2.12e-14;6!UBERON:0000369;4.96e-12;4!UBERON:0002435;4.96e-12;4!UBERON:0000204;4.96e-12;4!UBERON:0002680;1.39e-11;9!UBERON:0001895;1.39e-11;9!UBERON:0000988;1.86e-10;3!UBERON:0001872;2.92e-10;5!UBERON:0001896;3.30e-10;3!UBERON:0005290;3.30e-10;3!UBERON:0002021;5.56e-10;5!UBERON:0011216;9.10e-10;132!UBERON:0001870;1.67e-09;3!UBERON:0005383;2.57e-09;3!UBERON:0005382;2.57e-09;3!UBERON:0010314;3.49e-08;132!UBERON:0005162;7.87e-08;2!UBERON:0000122;7.87e-08;2!UBERON:0001875;1.20e-07;2!UBERON:0006514;1.20e-07;2!UBERON:0001897;1.32e-07;2!UBERON:0010225;1.32e-07;2!UBERON:0002784;1.61e-07;4!UBERON:0002148;1.90e-07;2!UBERON:0006331;1.90e-07;2!UBERON:0009662;1.90e-07;2!UBERON:0001894;2.30e-07;7!UBERON:0001954;7.78e-07;2!UBERON:0003022;7.78e-07;2!UBERON:0002421;7.78e-07;2!UBERON:0002600;7.78e-07;2!UBERON:0002702;9.03e-07;2!UBERON:0001873;9.58e-07;2!UBERON:0001876;9.73e-07;2!UBERON:0002771;9.87e-07;2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5540919722054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,1.4512968087854,0.864719720501769,1.13618190083742,63.5613921864612,86.711372601729,77.363515158631,32.503764744314,51.7222288297717,5.1058319833466,51.4487578735041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82095137628028,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,4.97073823883149,8.01815673539923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5706584453331,19.2029963195032,0,0,0,0,0,0,0,0,0,0,12.4003794013937,3.49729672013683,7.62908681585416,1.43753037910592,4.43321428430321,3.94893714877151,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,45.4283636289763,0,37.9508402075049,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,4.54289337429278,0,0,0,0,0,0,0.90392296312213,0,0,14.3082398860286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.6277390548461,23.5477251694228,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0.0674035438541849,0,0,7.95229689809303,8.17220436669454,0,0,0,0,0,9.8414281786,0,3.54625682846392,0.83927341015997,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,21.4609707560174,20.6282858718596,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,5.31640907980192,6.46739203980405,8.88855608016149,15.4820482836319,18.9688678128017,27.694995711857,0,0,19.2594379277893,7.13663333862419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76872455576384,0,0,7.74247242449692,0.974301544196942,0,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1304295212211,17.0035891590702,14.0477795970293,7.99953820538945,0,14.2463940076289,16.4705158544488,45.6862144829294,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3855055237181,17.9647962681185,9.50759263905447,21.3711280353466,0,0,0,0,0,0.535701835878287,1.00885116665647,0,0,0,0,0,33.2371994256707,17.3640122205922,0,0,0,7.22731713613609,0,0,0,0,3.4308741204795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,1.74847648403166,0,0,0,29.6425785343567,38.3189856421941,0.4226557275834,0,0,0,0,0,0,0,0,0,38.2716687014375,0,17.0658640379196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.8500998205161,32.581393696497,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0.0673520530145875,0,0,0,0,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |||
|short_description=p4@CAPN3 | |||
}} |
Revision as of 23:08, 11 January 2014
Short description: | p4@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAPN3_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 63bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.62e-15 | 10 |
melanoblast | 1.62e-15 | 10 |
pigment cell | 1.22e-13 | 14 |
light melanocyte | 6.01e-11 | 3 |
neurecto-epithelial cell | 3.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.73e-07 | 2 |