FFCP PHASE1:Hg19::chr9:113798489..113798512,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1902|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=3166|TSSclassifier=S|UniProt=Q6GPG7|association_with_transcript=-2bp_to_ENST00000449490_5end|description=CAGE_peak_15_at_LPAR1_5end|id=chr9:113798489..113798512,-|ontology_enrichment_celltype=CL:0000057!3.35e-19!75;CL:0000055!8.96e-16!180;CL:0002620!2.92e-10!23;CL:0002556!5.88e-07!6|ontology_enrichment_celltype_v019=CL:0002556;3.07e-14;6!CL:0002552;1.44e-12;5!CL:0002615;1.83e-08;3!CL:0002622;2.95e-08;3!CL:0002564;3.24e-08;3!CL:0000057;3.48e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,6.54e-17,76;CL:0002556,3.90e-14,6;CL:0002552,1.29e-12,5;CL:0002615,1.84e-08,3;CL:0002564,2.96e-08,3;CL:0002622,2.96e-08,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!2.04e-17!365;UBERON:0001049!4.57e-12!57;UBERON:0005068!4.57e-12!57;UBERON:0006241!4.57e-12!57;UBERON:0007135!4.57e-12!57;UBERON:0003102!2.19e-11!95;UBERON:0000033!1.18e-10!123;UBERON:0002780!5.57e-10!41;UBERON:0001890!5.57e-10!41;UBERON:0006240!5.57e-10!41;UBERON:0000914!5.67e-10!83;UBERON:0002329!5.67e-10!83;UBERON:0003077!5.67e-10!83;UBERON:0003059!5.67e-10!83;UBERON:0007282!5.67e-10!83;UBERON:0009618!5.67e-10!83;UBERON:0007285!5.67e-10!83;UBERON:0000153!9.40e-10!129;UBERON:0007811!9.40e-10!129;UBERON:0003080!1.58e-09!42;UBERON:0002616!2.19e-09!59;UBERON:0001893!2.78e-09!34;UBERON:0002020!3.66e-09!34;UBERON:0003528!3.66e-09!34;UBERON:0000955!7.09e-09!69;UBERON:0006238!7.09e-09!69;UBERON:0002791!8.75e-09!33;UBERON:0001869!4.65e-08!32;UBERON:0000075!5.89e-08!13;UBERON:0005944!5.89e-08!13;UBERON:0004288!5.89e-08!13;UBERON:0003089!5.89e-08!13;UBERON:0001017!6.55e-08!82;UBERON:0000477!1.93e-07!286;UBERON:0007023!2.14e-07!115;UBERON:0003075!3.33e-07!86;UBERON:0007284!3.33e-07!86;UBERON:0005743!5.40e-07!86;UBERON:0000073!5.45e-07!94;UBERON:0001016!5.45e-07!94;UBERON:0001758!5.88e-07!6;UBERON:0003672!5.88e-07!6;UBERON:0000481!7.51e-07!347;UBERON:0002346!9.34e-07!90|ontology_enrichment_uberon_v019=UBERON:0000075;9.27e-20;16!UBERON:0001758;3.07e-14;6!UBERON:0003672;3.07e-14;6!UBERON:0004905;3.68e-14;8!UBERON:0000982;3.68e-14;8!UBERON:0004770;3.68e-14;8!UBERON:0011135;8.67e-13;5!UBERON:0002216;8.67e-13;5!UBERON:0011134;8.67e-13;5!UBERON:0002209;8.67e-13;5!UBERON:0002213;8.67e-13;5!UBERON:0007844;8.67e-13;5!UBERON:0011138;8.67e-13;5!UBERON:0001130;8.67e-13;5!UBERON:0001066;8.67e-13;5!UBERON:0001468;8.67e-13;5!UBERON:0003129;4.46e-12;7!UBERON:0011137;6.16e-10;11!UBERON:0010323;6.16e-10;11!UBERON:0000165;1.08e-09;28!UBERON:0004457;4.79e-09;9!UBERON:0000042;4.79e-09;9!UBERON:0001434;6.25e-09;36!UBERON:0002242;3.24e-08;3!UBERON:0001828;1.19e-07;8!UBERON:0002367;1.43e-07;11!UBERON:0010147;1.43e-07;11!UBERON:0003688;6.82e-07;6!UBERON:0002358;6.82e-07;6!UBERON:0003684;6.82e-07;6!UBERON:0001178;6.82e-07;6!UBERON:0003937;7.26e-07;12!UBERON:0005399;7.26e-07;12!UBERON:0001444;9.79e-07;48|ontology_enrichment_uberon_v019_2=UBERON:0000075,1.12e-19,16;UBERON:0011137,1.47e-15,14;UBERON:0004905,3.69e-14,8;UBERON:0000982,3.69e-14,8;UBERON:0004770,3.69e-14,8;UBERON:0001758,3.90e-14,6;UBERON:0003672,3.90e-14,6;UBERON:0011135,8.06e-13,5;UBERON:0002216,8.06e-13,5;UBERON:0011134,8.06e-13,5;UBERON:0002209,8.06e-13,5;UBERON:0002213,8.06e-13,5;UBERON:0005856,8.06e-13,5;UBERON:0005866,8.06e-13,5;UBERON:0005863,8.06e-13,5;UBERON:0007844,8.06e-13,5;UBERON:0011138,8.06e-13,5;UBERON:0001130,8.06e-13,5;UBERON:0001066,8.06e-13,5;UBERON:0001468,8.06e-13,5;UBERON:0003129,5.46e-12,7;UBERON:0000165,6.54e-11,29;UBERON:0000930,6.54e-11,29;UBERON:0010323,7.48e-10,11;UBERON:0001444,1.41e-09,49;UBERON:0003102,8.63e-09,99;UBERON:0000161,2.59e-08,36;UBERON:0002242,2.96e-08,3;UBERON:0003068,2.96e-08,3;UBERON:0002328,2.96e-08,3;UBERON:0004880,2.96e-08,3;UBERON:0000033,7.52e-08,56;UBERON:0001828,1.11e-07,8;UBERON:0004923,1.16e-07,66;UBERON:0002367,1.49e-07,11;UBERON:0010147,1.49e-07,11;UBERON:0009846,1.49e-07,11;UBERON:0003353,1.49e-07,11;UBERON:0004902,1.49e-07,11;UBERON:0003820,1.49e-07,11;UBERON:0009847,1.49e-07,11;UBERON:0004122,5.99e-07,15;UBERON:0003937,7.53e-07,12;UBERON:0005399,7.53e-07,12;UBERON:0003688,8.02e-07,6;UBERON:0002358,8.02e-07,6;UBERON:0003684,8.02e-07,6;UBERON:0001178,8.02e-07,6|phase1_expression=3.27021082687002,3.63970890614671,5.77913056793482,7.00513088471913,4.46961094427288,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,10.3963736486439,4.30816588446291,0,0,0,0,0,0,0,0,0.136874425072884,0,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0843174571537,0,2.60723734129483,0,0.486634870302636,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.0130440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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=3166 | |||
|TSSclassifier=S | |||
|UniProt=Q6GPG7 | |||
|association_with_transcript=-2bp_to_ENST00000449490_5end | |||
|description=CAGE_peak_15_at_LPAR1_5end | |||
|id=chr9:113798489..113798512,- | |||
|ontology_enrichment_celltype=CL:0000057!3.35e-19!75;CL:0000055!8.96e-16!180;CL:0002620!2.92e-10!23;CL:0002556!5.88e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002556;3.07e-14;6!CL:0002552;1.44e-12;5!CL:0002615;1.83e-08;3!CL:0002622;2.95e-08;3!CL:0002564;3.24e-08;3!CL:0000057;3.48e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.54e-17,76;CL:0002556,3.90e-14,6;CL:0002552,1.29e-12,5;CL:0002615,1.84e-08,3;CL:0002564,2.96e-08,3;CL:0002622,2.96e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p15@LPAR1 | |||
}} |
Revision as of 06:56, 14 September 2013
Short description: | p15@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000449490_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | Q6GPG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.54e-17 | 76 |
fibroblast of periodontium | 3.90e-14 | 6 |
fibroblast of gingiva | 1.29e-12 | 5 |
adipocyte of omentum tissue | 1.84e-08 | 3 |
nucleus pulposus cell of intervertebral disc | 2.96e-08 | 3 |
prostate stromal cell | 2.96e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.