FFCP PHASE1:Hg19::chr17:50235645..50235676,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56934|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1369|TSSclassifier=S|UniProt=|association_with_transcript=52bp_to_uc002itv.3_5end|coexpression_cluster_id=C334|description=CAGE_peak_2_at_CA10_5end|id=chr17:50235645..50235676,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;1.43e-24;82!UBERON:0006215;2.39e-14;3!UBERON:0006241;1.99e-13;3!UBERON:0003057;1.99e-13;3!UBERON:0010122;2.63e-09;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.08e-96!57;UBERON:0005068!1.08e-96!57;UBERON:0006241!1.08e-96!57;UBERON:0007135!1.08e-96!57;UBERON:0001017!3.94e-85!82;UBERON:0005743!6.66e-84!86;UBERON:0000955!1.70e-83!69;UBERON:0006238!1.70e-83!69;UBERON:0000073!8.82e-81!94;UBERON:0001016!8.82e-81!94;UBERON:0002616!3.06e-80!59;UBERON:0002780!1.25e-72!41;UBERON:0001890!1.25e-72!41;UBERON:0006240!1.25e-72!41;UBERON:0003080!1.06e-70!42;UBERON:0003075!8.93e-69!86;UBERON:0007284!8.93e-69!86;UBERON:0007023!4.53e-68!115;UBERON:0002346!3.67e-65!90;UBERON:0001893!1.01e-59!34;UBERON:0002020!1.81e-59!34;UBERON:0003528!1.81e-59!34;UBERON:0002791!4.98e-57!33;UBERON:0001869!5.14e-55!32;UBERON:0003056!7.95e-49!61;UBERON:0000033!5.85e-46!123;UBERON:0002619!4.14e-44!22;UBERON:0000153!3.10e-43!129;UBERON:0007811!3.10e-43!129;UBERON:0004121!1.45e-42!169;UBERON:0000924!2.91e-41!173;UBERON:0006601!2.91e-41!173;UBERON:0001950!3.55e-39!20;UBERON:0000956!2.37e-38!25;UBERON:0000203!2.37e-38!25;UBERON:0003076!1.28e-25!15;UBERON:0003057!1.28e-25!15;UBERON:0002420!2.08e-23!9;UBERON:0007245!2.08e-23!9;UBERON:0010009!2.08e-23!9;UBERON:0010011!2.08e-23!9;UBERON:0000454!2.08e-23!9;UBERON:0000025!2.20e-23!194;UBERON:0002308!5.46e-23!9;UBERON:0000125!5.46e-23!9;UBERON:0004732!1.71e-20!13;UBERON:0004733!3.25e-18!12;UBERON:0002028!3.25e-18!12;UBERON:0007277!3.25e-18!12;UBERON:0009663!3.55e-18!7;UBERON:0004111!2.78e-17!241;UBERON:0000200!3.69e-17!6;UBERON:0001871!1.58e-16!7;UBERON:0002298!2.59e-16!8;UBERON:0000349!2.05e-14!5;UBERON:0001894!6.63e-14!7;UBERON:0006222!6.63e-14!7;UBERON:0000475!7.46e-14!365;UBERON:0000477!1.95e-13!286;UBERON:0000064!4.53e-13!219;UBERON:0000483!3.51e-12!309;UBERON:0000119!6.11e-12!312;UBERON:0002680!1.67e-11!9;UBERON:0001895!1.67e-11!9;UBERON:0010092!1.67e-11!9;UBERON:0003296!2.45e-11!4;UBERON:0010133!2.45e-11!4;UBERON:0000369!2.80e-11!4;UBERON:0002435!2.80e-11!4;UBERON:0000204!2.80e-11!4;UBERON:0010082!2.80e-11!4;UBERON:0000062!3.45e-10!511;UBERON:0002240!1.53e-09!3;UBERON:0001872!2.67e-09!5;UBERON:0002771!2.75e-09!3;UBERON:0000988!2.83e-09!3;UBERON:0002021!4.19e-09!5;UBERON:0001896!5.64e-09!3;UBERON:0005290!5.64e-09!3;UBERON:0010096!5.64e-09!3;UBERON:0006331!8.94e-09!3;UBERON:0005383!9.44e-09!3;UBERON:0005382!9.44e-09!3;UBERON:0000922!5.65e-08!612;UBERON:0002050!1.25e-07!605;UBERON:0005423!1.25e-07!605;UBERON:0000481!2.24e-07!347;UBERON:0000923!4.11e-07!604;UBERON:0005291!4.11e-07!604;UBERON:0006598!4.11e-07!604;UBERON:0002532!4.11e-07!604;UBERON:0001905!5.77e-07!2;UBERON:0002757!5.77e-07!2;UBERON:0010134!5.77e-07!2;UBERON:0002784!5.77e-07!2;UBERON:0005408!5.77e-07!2;UBERON:0001899!5.77e-07!2;UBERON:0001876!6.28e-07!2;UBERON:0000467!6.60e-07!625;UBERON:0000480!7.19e-07!626;UBERON:0001870!9.36e-07!2|ontology_enrichment_uberon_v019=UBERON:0000073;2.27e-53;53!UBERON:0002616;2.27e-53;53!UBERON:0001893;7.19e-52;34!UBERON:0002780;1.06e-50;41!UBERON:0001890;1.06e-50;41!UBERON:0001869;5.94e-49;32!UBERON:0002791;1.21e-48;32!UBERON:0003528;3.43e-47;34!UBERON:0002020;3.43e-47;34!UBERON:0002619;1.29e-42;22!UBERON:0001950;4.51e-41;20!UBERON:0000955;1.71e-37;68!UBERON:0000956;2.97e-37;25!UBERON:0000203;2.97e-37;25!UBERON:0001017;6.67e-37;75!UBERON:0001016;1.36e-29;83!UBERON:0002420;1.05e-27;9!UBERON:0007245;1.05e-27;9!UBERON:0010009;1.05e-27;9!UBERON:0010011;1.05e-27;9!UBERON:0000454;1.05e-27;9!UBERON:0004732;5.30e-25;13!UBERON:0000200;5.87e-25;6!UBERON:0004733;1.02e-21;12!UBERON:0002028;1.02e-21;12!UBERON:0000125;2.36e-21;9!UBERON:0002308;2.36e-21;9!UBERON:0009663;2.80e-20;7!UBERON:0007023;7.09e-19;114!UBERON:0002298;3.45e-17;6!UBERON:0001871;1.41e-14;6!UBERON:0000349;1.53e-13;5!UBERON:0002240;1.99e-13;3!UBERON:0005174;1.99e-13;3!UBERON:0001137;1.99e-13;3!UBERON:0001870;2.73e-13;3!UBERON:0001896;1.42e-12;3!UBERON:0005290;1.42e-12;3!UBERON:0002680;2.50e-12;9!UBERON:0001895;2.50e-12;9!UBERON:0011216;1.04e-11;132!UBERON:0002784;5.14e-10;4!UBERON:0000369;8.15e-10;4!UBERON:0002435;8.15e-10;4!UBERON:0000204;8.15e-10;4!UBERON:0001894;1.20e-09;7!UBERON:0001905;1.40e-09;2!UBERON:0002757;1.40e-09;2!UBERON:0010134;1.40e-09;2!UBERON:0005408;1.40e-09;2!UBERON:0001899;1.40e-09;2!UBERON:0002771;2.63e-09;2!UBERON:0001876;2.63e-09;2!UBERON:0001873;2.63e-09;2!UBERON:0002702;2.63e-09;2!UBERON:0010314;5.14e-09;132!UBERON:0001875;6.02e-09;2!UBERON:0005162;6.02e-09;2!UBERON:0000122;6.02e-09;2!UBER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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56934 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1369 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=52bp_to_uc002itv.3_5end | |||
|coexpression_cluster_id=C334 | |||
|description=CAGE_peak_2_at_CA10_5end | |||
|id=chr17:50235645..50235676,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.43e-24;82!UBERON:0006215;2.39e-14;3!UBERON:0006241;1.99e-13;3!UBERON:0003057;1.99e-13;3!UBERON:0010122;2.63e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@CA10 | |||
}} |
Revision as of 14:36, 11 September 2013
Short description: | p2@CA10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CA10_5end |
Coexpression cluster: | C334_cerebellum_pineal_occipital_pituitary_amygdala_medial_caudate |
Association with transcript: | 52bp_to_uc002itv.3_5end |
EntrezGene: | CA10 |
HGNC: | 1369 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.