FFCP PHASE1:Hg19::chr14:22005197..22005261,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6297|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10526|TSSclassifier=S|UniProt=F5H5K7,F5H1G6|association_with_transcript=0bp_to_ENST00000541876,ENST00000541965_5end|coexpression_cluster_id=C49|description=CAGE_peak_3_at_SALL2_5end|id=chr14:22005197..22005261,-|ontology_enrichment_celltype=CL:0002322!7.44e-12!5|ontology_enrichment_celltype_v019=CL:0002322;3.29e-16;5!CL:0002321;2.58e-09;15|ontology_enrichment_celltype_v019_2=CL:0002322,3.34e-16,5|ontology_enrichment_development_v019=UBERON:0006601;7.78e-18;82!UBERON:0006241;3.46e-09;3!UBERON:0003057;3.46e-09;3!UBERON:0010122;4.75e-07;2|ontology_enrichment_disease=DOID:3095!5.65e-10!22;DOID:2994!5.65e-10!22|ontology_enrichment_disease_v019=DOID:3095;1.72e-08;22!DOID:2994;1.72e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,1.61e-08,22;DOID:2994,1.61e-08,22|ontology_enrichment_uberon=UBERON:0001049!1.01e-73!57;UBERON:0005068!1.01e-73!57;UBERON:0006241!1.01e-73!57;UBERON:0007135!1.01e-73!57;UBERON:0001017!1.57e-68!82;UBERON:0005743!6.37e-67!86;UBERON:0000073!5.54e-64!94;UBERON:0001016!5.54e-64!94;UBERON:0002616!2.76e-61!59;UBERON:0002780!2.24e-58!41;UBERON:0001890!2.24e-58!41;UBERON:0006240!2.24e-58!41;UBERON:0002346!1.30e-57!90;UBERON:0000955!3.01e-57!69;UBERON:0006238!3.01e-57!69;UBERON:0003080!9.93e-57!42;UBERON:0003075!5.93e-54!86;UBERON:0007284!5.93e-54!86;UBERON:0002020!4.12e-47!34;UBERON:0003528!4.12e-47!34;UBERON:0001893!7.10e-47!34;UBERON:0002791!2.88e-45!33;UBERON:0003056!6.83e-44!61;UBERON:0001869!2.34e-43!32;UBERON:0007023!3.34e-43!115;UBERON:0000924!2.63e-34!173;UBERON:0006601!2.63e-34!173;UBERON:0000033!1.29e-32!123;UBERON:0004121!1.66e-31!169;UBERON:0000956!3.20e-31!25;UBERON:0000203!3.20e-31!25;UBERON:0000153!2.21e-30!129;UBERON:0007811!2.21e-30!129;UBERON:0002619!5.18e-30!22;UBERON:0001950!1.53e-26!20;UBERON:0002308!1.46e-17!9;UBERON:0000125!1.46e-17!9;UBERON:0002420!2.08e-17!9;UBERON:0007245!2.08e-17!9;UBERON:0010009!2.08e-17!9;UBERON:0010011!2.08e-17!9;UBERON:0000454!2.08e-17!9;UBERON:0003076!2.52e-17!15;UBERON:0003057!2.52e-17!15;UBERON:0009663!8.01e-14!7;UBERON:0000025!4.76e-13!194;UBERON:0001894!1.03e-12!7;UBERON:0006222!1.03e-12!7;UBERON:0004733!2.11e-12!12;UBERON:0002028!2.11e-12!12;UBERON:0007277!2.11e-12!12;UBERON:0002298!3.20e-12!8;UBERON:0001871!8.22e-12!7;UBERON:0000200!2.00e-11!6;UBERON:0004732!2.73e-11!13;UBERON:0000349!1.31e-10!5;UBERON:0003135!4.12e-09!11;UBERON:0000369!4.29e-09!4;UBERON:0002435!4.29e-09!4;UBERON:0000204!4.29e-09!4;UBERON:0010082!4.29e-09!4;UBERON:0000922!7.90e-09!612;UBERON:0004111!1.56e-08!241;UBERON:0000473!1.56e-07!8;UBERON:0002680!1.63e-07!9;UBERON:0001895!1.63e-07!9;UBERON:0010092!1.63e-07!9;UBERON:0000477!1.84e-07!286;UBERON:0003296!2.24e-07!4;UBERON:0010133!2.24e-07!4;UBERON:0005383!2.88e-07!3;UBERON:0005382!2.88e-07!3;UBERON:0001896!3.33e-07!3;UBERON:0005290!3.33e-07!3;UBERON:0010096!3.33e-07!3;UBERON:0000988!4.51e-07!3;UBERON:0006331!5.97e-07!3;UBERON:0002240!6.73e-07!3;UBERON:0000064!9.62e-07!219|ontology_enrichment_uberon_v019=UBERON:0003528;7.63e-46;34!UBERON:0002020;7.63e-46;34!UBERON:0001893;2.12e-45;34!UBERON:0002791;3.23e-45;32!UBERON:0002780;5.06e-45;41!UBERON:0001890;5.06e-45;41!UBERON:0001869;2.26e-44;32!UBERON:0000073;2.35e-43;53!UBERON:0002616;2.35e-43;53!UBERON:0002619;9.70e-39;22!UBERON:0001950;7.94e-34;20!UBERON:0000956;1.14e-33;25!UBERON:0000203;1.14e-33;25!UBERON:0001017;9.36e-32;75!UBERON:0000955;6.38e-30;68!UBERON:0001016;8.64e-26;83!UBERON:0000125;2.32e-24;9!UBERON:0002308;2.32e-24;9!UBERON:0002420;4.06e-24;9!UBERON:0007245;4.06e-24;9!UBERON:0010009;4.06e-24;9!UBERON:0010011;4.06e-24;9!UBERON:0000454;4.06e-24;9!UBERON:0009663;4.52e-19;7!UBERON:0002298;2.91e-17;6!UBERON:0000200;9.99e-16;6!UBERON:0000349;2.00e-14;5!UBERON:0004733;4.16e-14;12!UBERON:0002028;4.16e-14;12!UBERON:0001871;6.58e-14;6!UBERON:0004732;6.56e-13;13!UBERON:0000369;2.73e-12;4!UBERON:0002435;2.73e-12;4!UBERON:0000204;2.73e-12;4!UBERON:0007023;2.62e-11;114!UBERON:0011216;2.65e-10;132!UBERON:0005383;1.12e-09;3!UBERON:0005382;1.12e-09;3!UBERON:0001894;1.29e-09;7!UBERON:0001896;1.47e-09;3!UBERON:0005290;1.47e-09;3!UBERON:0000988;2.08e-09;3!UBERON:0002240;3.46e-09;3!UBERON:0005174;3.46e-09;3!UBERON:0001137;3.46e-09;3!UBERON:0002021;4.80e-09;5!UBERON:0001870;1.19e-08;3!UBERON:0002680;1.20e-07;9!UBERON:0001895;1.20e-07;9!UBERON:0001873;4.75e-07;2!UBERON:0002148;5.58e-07;2!UBERON:0006331;5.58e-07;2!UBERON:0009662;5.58e-07;2!UBERON:0001954;9.68e-07;2!UBERON:0003022;9.68e-07;2!UBERON:0002421;9.68e-07;2!UBERON:0002600;9.68e-07;2!UBERON:0001876;9.96e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.05e-84,56;UBERON:0005068,3.05e-84,56;UBERON:0006241,3.05e-84,56;UBERON:0007135,3.05e-84,56;UBERON:0001017,1.64e-79,81;UBERON:0001016,7.42e-77,89;UBERON:0000073,9.67e-77,53;UBERON:0002616,9.67e-77,53;UBERON:0000955,2.60e-66,68;UBERON:0006238,2.60e-66,68;UBERON:0002780,2.50e-63,41;UBERON:0001890,2.50e-63,41;UBERON:0003080,2.50e-63,41;UBERON:0006240,2.50e-6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,0.275684698604535,0.752122617877125,0.227336094654718,0.267964130156178,2.48750831837634,6.5162787392994,0,0,0,0,0,0.12729431655633,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0|short_description=p3@SALL2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6297 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10526 | |||
|TSSclassifier=S | |||
|UniProt=F5H5K7,F5H1G6 | |||
|association_with_transcript=0bp_to_ENST00000541876,ENST00000541965_5end | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_SALL2_5end | |||
|id=chr14:22005197..22005261,- | |||
|ontology_enrichment_celltype=CL:0002322!7.44e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.29e-16;5!CL:0002321;2.58e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.34e-16,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.78e-18;82!UBERON:0006241;3.46e-09;3!UBERON:0003057;3.46e-09;3!UBERON:0010122;4.75e-07;2 | |||
|ontology_enrichment_disease=DOID:3095!5.65e-10!22;DOID:2994!5.65e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.72e-08;22!DOID:2994;1.72e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.61e-08,22;DOID:2994,1.61e-08,22 | |||
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|short_description=p3@SALL2 | |||
}} |
Revision as of 03:46, 11 September 2013
Short description: | p3@SALL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_SALL2_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000541876, ENST00000541965_5end |
EntrezGene: | SALL2 |
HGNC: | 10526 |
UniProt: | F5H5K7F5H1G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.34e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.61e-08 | 22 |
germ cell cancer | 1.61e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.